RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 C1orf53Q5VUE5 145 aa29.12■■■□□ 2.25
CDKN3-202ENST00000335183 ZNF444Q8N0Y2 327 aaPredicted RBP29.12■■■□□ 2.25
CDKN3-202ENST00000335183 CPXCR1Q8N123 301 aa29.12■■■□□ 2.25
CDKN3-202ENST00000335183 LENG1Q96BZ8 264 aaPredicted RBP29.12■■■□□ 2.25
CDKN3-202ENST00000335183 DDX11Q96FC9 970 aa29.12■■■□□ 2.25
CDKN3-202ENST00000335183 CTDP1Q9Y5B0 961 aaPredicted RBP29.12■■■□□ 2.25
CDKN3-202ENST00000335183 MCM3APO60318 1980 aa29.12■■■□□ 2.25
CDKN3-202ENST00000335183 TRIM43BA6NCK2 446 aa29.11■■■□□ 2.25
CDKN3-202ENST00000335183 GNAT2P19087 354 aa29.11■■■□□ 2.25
CDKN3-202ENST00000335183 TLE2Q04725 743 aa29.11■■■□□ 2.25
CDKN3-202ENST00000335183 C9orf50Q5SZB4 431 aa29.11■■■□□ 2.25
CDKN3-202ENST00000335183 FAM109BQ6ICB4 259 aaPredicted RBP29.11■■■□□ 2.25
CDKN3-202ENST00000335183 PRPF38AQ8NAV1 312 aaKnown RBP29.11■■■□□ 2.25
CDKN3-202ENST00000335183 TRIM43Q96BQ3 446 aaPredicted RBP29.11■■■□□ 2.25
CDKN3-202ENST00000335183 RIPK3Q9Y572 518 aa29.11■■■□□ 2.25
CDKN3-202ENST00000335183 ZNF697Q5TEC3 545 aa29.1■■■□□ 2.25
CDKN3-202ENST00000335183 KIFC2Q96AC6 838 aa29.1■■■□□ 2.25
CDKN3-202ENST00000335183 GUCD1Q96NT3 240 aa29.1■■■□□ 2.25
CDKN3-202ENST00000335183 ZNF287Q9HBT7 754 aa29.1■■■□□ 2.25
CDKN3-202ENST00000335183 IGKV6D-41A0A0C4DH26 115 aa29.09■■■□□ 2.25
CDKN3-202ENST00000335183 ZBED4O75132 1171 aa29.09■■■□□ 2.25
CDKN3-202ENST00000335183 CEP95Q96GE4 821 aa29.09■■■□□ 2.25
CDKN3-202ENST00000335183 A0A1W2PQ45 241 aaPredicted RBP29.08■■■□□ 2.25
CDKN3-202ENST00000335183 A0A1W2PQY0 241 aa29.08■■■□□ 2.25
CDKN3-202ENST00000335183 IFNL3Q8IZI9 196 aa29.08■■■□□ 2.25
CDKN3-202ENST00000335183 RAVER2Q9HCJ3 691 aaKnown RBP29.08■■■□□ 2.25
CDKN3-202ENST00000335183 ZHX1Q9UKY1 873 aaPredicted RBP29.08■■■□□ 2.25
CDKN3-202ENST00000335183 CLTBP09497 229 aa29.07■■■□□ 2.24
CDKN3-202ENST00000335183 LRRFIP1Q32MZ4 808 aaKnown RBP29.07■■■□□ 2.24
CDKN3-202ENST00000335183 LRRC47Q8N1G4 583 aaKnown RBP29.07■■■□□ 2.24
CDKN3-202ENST00000335183 MSL3Q8N5Y2 521 aaKnown RBP29.07■■■□□ 2.24
CDKN3-202ENST00000335183 TACC3Q9Y6A5 838 aa29.07■■■□□ 2.24
CDKN3-202ENST00000335183 SYNGAP1Q96PV0 1343 aa29.06■■■□□ 2.24
CDKN3-202ENST00000335183 PATL2C9JE40 543 aaKnown RBP29.06■■■□□ 2.24
CDKN3-202ENST00000335183 PQBP1O60828 265 aaKnown RBP29.06■■■□□ 2.24
CDKN3-202ENST00000335183 ADAMTS4O75173 837 aa29.06■■■□□ 2.24
CDKN3-202ENST00000335183 MTMR4Q9NYA4 1195 aa29.06■■■□□ 2.24
CDKN3-202ENST00000335183 FAM184BQ9ULE4 1060 aa29.06■■■□□ 2.24
CDKN3-202ENST00000335183 SYNRGQ9UMZ2 1314 aa29.05■■■□□ 2.24
CDKN3-202ENST00000335183 SNAI1O95863 264 aaPredicted RBP29.05■■■□□ 2.24
CDKN3-202ENST00000335183 TTLL1O95922 423 aa29.05■■■□□ 2.24
CDKN3-202ENST00000335183 MKL1Q969V6 931 aa29.05■■■□□ 2.24
CDKN3-202ENST00000335183 SEC62Q99442 399 aaKnown RBP29.05■■■□□ 2.24
CDKN3-202ENST00000335183 NACAP1Q9BZK3 213 aa29.05■■■□□ 2.24
CDKN3-202ENST00000335183 FEM1BQ9UK73 627 aa29.05■■■□□ 2.24
CDKN3-202ENST00000335183 ISY1Q9ULR0 285 aaKnown RBP29.05■■■□□ 2.24
CDKN3-202ENST00000335183 TTC41PQ6P2S7 1318 aa29.04■■■□□ 2.24
CDKN3-202ENST00000335183 DNAJC25-GNG10A0A024R161 153 aa29.04■■■□□ 2.24
CDKN3-202ENST00000335183 ATP2A1O14983 1001 aa29.04■■■□□ 2.24
CDKN3-202ENST00000335183 TSPY3P0CV98 308 aa29.04■■■□□ 2.24
CDKN3-202ENST00000335183 TSPY8P0CW00 308 aa29.04■■■□□ 2.24
CDKN3-202ENST00000335183 ITGB8P26012 769 aa29.04■■■□□ 2.24
CDKN3-202ENST00000335183 ANKRD35Q8N283 1001 aa29.04■■■□□ 2.24
CDKN3-202ENST00000335183 SLC38A10Q9HBR0 1119 aa29.04■■■□□ 2.24
CDKN3-202ENST00000335183 STARD7Q9NQZ5 370 aa29.04■■■□□ 2.24
CDKN3-202ENST00000335183 ERC2O15083 957 aa29.03■■■□□ 2.24
CDKN3-202ENST00000335183 ACLYP53396 1101 aa29.03■■■□□ 2.24
CDKN3-202ENST00000335183 PDE4BQ07343 736 aa29.03■■■□□ 2.24
CDKN3-202ENST00000335183 SLFN13Q68D06 897 aa29.03■■■□□ 2.24
CDKN3-202ENST00000335183 MAMDC4Q6UXC1 1216 aa29.03■■■□□ 2.24
CDKN3-202ENST00000335183 TSEN34Q9BSV6 310 aaKnown RBP29.03■■■□□ 2.24
CDKN3-202ENST00000335183 FSD1Q9BTV5 496 aa29.03■■■□□ 2.24
CDKN3-202ENST00000335183 BMP3P12645 472 aa29.02■■■□□ 2.24
CDKN3-202ENST00000335183 RAG1P15918 1043 aa29.02■■■□□ 2.24
CDKN3-202ENST00000335183 GMCL1P1Q8NEA9 526 aa29.02■■■□□ 2.24
CDKN3-202ENST00000335183 NUP133Q8WUM0 1156 aa29.02■■■□□ 2.24
CDKN3-202ENST00000335183 NAPBQ9H115 298 aa29.02■■■□□ 2.24
CDKN3-202ENST00000335183 TMEM39AQ9NV64 488 aa29.02■■■□□ 2.24
CDKN3-202ENST00000335183 FBXO40Q9UH90 709 aa29.02■■■□□ 2.24
CDKN3-202ENST00000335183 SLC3A2P08195 630 aaKnown RBP29.01■■■□□ 2.23
CDKN3-202ENST00000335183 ZNF467Q7Z7K2 595 aaPredicted RBP29.01■■■□□ 2.23
CDKN3-202ENST00000335183 NEDD1Q8NHV4 660 aa29.01■■■□□ 2.23
CDKN3-202ENST00000335183 CHMP4CQ96CF2 233 aa29.01■■■□□ 2.23
CDKN3-202ENST00000335183 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.01■■■□□ 2.23
CDKN3-202ENST00000335183 SYNPO2Q9UMS6 1093 aa29.01■■■□□ 2.23
CDKN3-202ENST00000335183 PLIN4Q96Q06 1357 aa29.01■■■□□ 2.23
CDKN3-202ENST00000335183 MOXD2PA6NHM9 499 aa29■■■□□ 2.23
CDKN3-202ENST00000335183 KIAA0355O15063 1070 aa29■■■□□ 2.23
CDKN3-202ENST00000335183 TFAP4Q01664 338 aa29■■■□□ 2.23
CDKN3-202ENST00000335183 ACVR2BQ13705 512 aa29■■■□□ 2.23
CDKN3-202ENST00000335183 KCNA10Q16322 511 aa29■■■□□ 2.23
CDKN3-202ENST00000335183 KLHDC9Q8NEP7 349 aa29■■■□□ 2.23
CDKN3-202ENST00000335183 CHST13Q8NET6 341 aa29■■■□□ 2.23
CDKN3-202ENST00000335183 PI4K2BQ8TCG2 481 aa29■■■□□ 2.23
CDKN3-202ENST00000335183 OTUD7AQ8TE49 926 aaPredicted RBP29■■■□□ 2.23
CDKN3-202ENST00000335183 HOMER2Q9NSB8 354 aa29■■■□□ 2.23
CDKN3-202ENST00000335183 MYADML2A6NDP7 307 aa28.99■■■□□ 2.23
CDKN3-202ENST00000335183 TMEM232C9JQI7 657 aa28.99■■■□□ 2.23
CDKN3-202ENST00000335183 DUSP11O75319 330 aaKnown RBP28.99■■■□□ 2.23
CDKN3-202ENST00000335183 OAZ1P54368 228 aa28.99■■■□□ 2.23
CDKN3-202ENST00000335183 PPARAQ07869 468 aa28.99■■■□□ 2.23
CDKN3-202ENST00000335183 RNPC3Q96LT9 517 aaKnown RBP28.99■■■□□ 2.23
CDKN3-202ENST00000335183 DCDC2CA8MYV0 355 aa28.98■■■□□ 2.23
CDKN3-202ENST00000335183 C6orf222P0C671 652 aaPredicted RBP28.98■■■□□ 2.23
CDKN3-202ENST00000335183 EPHB4P54760 987 aa28.98■■■□□ 2.23
CDKN3-202ENST00000335183 IRX5P78411 483 aaPredicted RBP28.98■■■□□ 2.23
CDKN3-202ENST00000335183 SMAD3P84022 425 aaKnown RBP28.98■■■□□ 2.23
CDKN3-202ENST00000335183 IKQ13123 557 aaPredicted RBP28.98■■■□□ 2.23
CDKN3-202ENST00000335183 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.98■■■□□ 2.23
CDKN3-202ENST00000335183 FGD4Q96M96 766 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms