RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 FAM26FQ5R3K3 315 aa18.9■□□□□ 0.62
TRAPPC11-201ENST00000334690 CEP57Q86XR8 500 aa18.9■□□□□ 0.62
TRAPPC11-201ENST00000334690 PICK1Q9NRD5 415 aa18.9■□□□□ 0.62
TRAPPC11-201ENST00000334690 PCDHB13Q9Y5F0 798 aa18.9■□□□□ 0.62
TRAPPC11-201ENST00000334690 CRKLP46109 303 aaKnown RBP18.9■□□□□ 0.62
TRAPPC11-201ENST00000334690 ZYXQ15942 572 aaKnown RBP18.9■□□□□ 0.62
TRAPPC11-201ENST00000334690 RABGGTAQ92696 567 aa18.9■□□□□ 0.62
TRAPPC11-201ENST00000334690 ADGRL3Q9HAR2 1447 aa18.9■□□□□ 0.62
TRAPPC11-201ENST00000334690 GAS7O60861 476 aa18.9■□□□□ 0.62
TRAPPC11-201ENST00000334690 AK8Q96MA6 479 aa18.9■□□□□ 0.62
TRAPPC11-201ENST00000334690 PUS7LQ9H0K6 701 aaKnown RBP18.9■□□□□ 0.62
TRAPPC11-201ENST00000334690 METTL14Q9HCE5 456 aaKnown RBP18.9■□□□□ 0.62
TRAPPC11-201ENST00000334690 FEZ2Q9UHY8 353 aaPredicted RBP18.9■□□□□ 0.62
TRAPPC11-201ENST00000334690 MMP1P03956 469 aa18.89■□□□□ 0.61
TRAPPC11-201ENST00000334690 HARSP12081 509 aaKnown RBP18.89■□□□□ 0.61
TRAPPC11-201ENST00000334690 APBB1IPQ7Z5R6 666 aaPredicted RBP18.89■□□□□ 0.61
TRAPPC11-201ENST00000334690 SLFN12Q8IYM2 578 aa18.89■□□□□ 0.61
TRAPPC11-201ENST00000334690 GPATCH11Q8N954 259 aa18.89■□□□□ 0.61
TRAPPC11-201ENST00000334690 CCDC63Q8NA47 563 aa18.89■□□□□ 0.61
TRAPPC11-201ENST00000334690 TRIM31Q9BZY9 425 aa18.89■□□□□ 0.61
TRAPPC11-201ENST00000334690 DDX41Q9UJV9 622 aaKnown RBP18.89■□□□□ 0.61
TRAPPC11-201ENST00000334690 EEF1GP26641 437 aaKnown RBP18.89■□□□□ 0.61
TRAPPC11-201ENST00000334690 HOOK2Q96ED9 719 aa18.89■□□□□ 0.61
TRAPPC11-201ENST00000334690 NPHP4O75161 1426 aaPredicted RBP18.89■□□□□ 0.61
TRAPPC11-201ENST00000334690 POTEDQ86YR6 584 aa18.89■□□□□ 0.61
TRAPPC11-201ENST00000334690 CPXCR1Q8N123 301 aa18.89■□□□□ 0.61
TRAPPC11-201ENST00000334690 LARGE2Q8N3Y3 721 aa18.89■□□□□ 0.61
TRAPPC11-201ENST00000334690 ENOX1Q8TC92 643 aaKnown RBP18.89■□□□□ 0.61
TRAPPC11-201ENST00000334690 FTOQ9C0B1 505 aaKnown RBP eCLIP18.89■□□□□ 0.61
TRAPPC11-201ENST00000334690 MYO1AQ9UBC5 1043 aa18.89■□□□□ 0.61
TRAPPC11-201ENST00000334690 PDE6BP35913 854 aa18.88■□□□□ 0.61
TRAPPC11-201ENST00000334690 LSM14BQ9BX40 385 aaKnown RBP18.88■□□□□ 0.61
TRAPPC11-201ENST00000334690 ASIC3Q9UHC3 531 aa18.88■□□□□ 0.61
TRAPPC11-201ENST00000334690 CDC23Q9UJX2 597 aa18.88■□□□□ 0.61
TRAPPC11-201ENST00000334690 LEMD3Q9Y2U8 911 aa18.88■□□□□ 0.61
TRAPPC11-201ENST00000334690 MAK16Q9BXY0 300 aaKnown RBP18.88■□□□□ 0.61
TRAPPC11-201ENST00000334690 RAB17Q9H0T7 212 aa18.88■□□□□ 0.61
TRAPPC11-201ENST00000334690 MYCLP12524 364 aaPredicted RBP18.88■□□□□ 0.61
TRAPPC11-201ENST00000334690 BTDP43251 543 aa18.88■□□□□ 0.61
TRAPPC11-201ENST00000334690 NSMFQ6X4W1 530 aa18.88■□□□□ 0.61
TRAPPC11-201ENST00000334690 TPH2Q8IWU9 490 aa18.88■□□□□ 0.61
TRAPPC11-201ENST00000334690 GOLGA5Q8TBA6 731 aa18.88■□□□□ 0.61
TRAPPC11-201ENST00000334690 PPP1R13BQ96KQ4 1090 aa18.88■□□□□ 0.61
TRAPPC11-201ENST00000334690 AMFRQ9UKV5 643 aa18.88■□□□□ 0.61
TRAPPC11-201ENST00000334690 ZBED4O75132 1171 aa18.88■□□□□ 0.61
TRAPPC11-201ENST00000334690 NT5C2P49902 561 aa18.88■□□□□ 0.61
TRAPPC11-201ENST00000334690 TRPC3Q13507 836 aa18.88■□□□□ 0.61
TRAPPC11-201ENST00000334690 PI16Q6UXB8 463 aa18.88■□□□□ 0.61
TRAPPC11-201ENST00000334690 MED14O60244 1454 aa18.87■□□□□ 0.61
TRAPPC11-201ENST00000334690 GOLGA8HP0CJ92 632 aa18.87■□□□□ 0.61
TRAPPC11-201ENST00000334690 INPP5BP32019 993 aa18.87■□□□□ 0.61
TRAPPC11-201ENST00000334690 CLEC17AQ6ZS10 378 aa18.87■□□□□ 0.61
TRAPPC11-201ENST00000334690 RETREG2Q8NC44 543 aa18.87■□□□□ 0.61
TRAPPC11-201ENST00000334690 PPM1EQ8WY54 764 aa18.87■□□□□ 0.61
TRAPPC11-201ENST00000334690 AGTPBP1Q9UPW5 1226 aa18.87■□□□□ 0.61
TRAPPC11-201ENST00000334690 MYL1P05976 194 aa18.87■□□□□ 0.61
TRAPPC11-201ENST00000334690 IGKV5-2P06315 115 aa18.87■□□□□ 0.61
TRAPPC11-201ENST00000334690 DLGAP5Q15398 846 aa18.87■□□□□ 0.61
TRAPPC11-201ENST00000334690 INTS8Q75QN2 995 aaKnown RBP18.87■□□□□ 0.61
TRAPPC11-201ENST00000334690 MAEAQ7L5Y9 396 aa18.87■□□□□ 0.61
TRAPPC11-201ENST00000334690 MAIP1Q8WWC4 291 aa18.87■□□□□ 0.61
TRAPPC11-201ENST00000334690 DHTKD1Q96HY7 919 aaPredicted RBP18.87■□□□□ 0.61
TRAPPC11-201ENST00000334690 TMOD4Q9NZQ9 345 aa18.87■□□□□ 0.61
TRAPPC11-201ENST00000334690 ZSWIM5Q9P217 1185 aa18.87■□□□□ 0.61
TRAPPC11-201ENST00000334690 TAOK1Q7L7X3 1001 aa18.87■□□□□ 0.61
TRAPPC11-201ENST00000334690 CCDC17Q96LX7 622 aa18.87■□□□□ 0.61
TRAPPC11-201ENST00000334690 CEP63Q96MT8 703 aa18.87■□□□□ 0.61
TRAPPC11-201ENST00000334690 TUBGCP2Q9BSJ2 902 aa18.87■□□□□ 0.61
TRAPPC11-201ENST00000334690 COL4A3BPQ9Y5P4 624 aa18.87■□□□□ 0.61
TRAPPC11-201ENST00000334690 FOSP01100 380 aaPredicted RBP18.86■□□□□ 0.61
TRAPPC11-201ENST00000334690 CASP14P31944 242 aa18.86■□□□□ 0.61
TRAPPC11-201ENST00000334690 GPATCH4Q5T3I0 446 aaKnown RBP18.86■□□□□ 0.61
TRAPPC11-201ENST00000334690 GPIHBP1Q8IV16 184 aa18.86■□□□□ 0.61
TRAPPC11-201ENST00000334690 CCDC14Q49A88 953 aa18.86■□□□□ 0.61
TRAPPC11-201ENST00000334690 GBP6Q6ZN66 633 aa18.86■□□□□ 0.61
TRAPPC11-201ENST00000334690 STK32BQ9NY57 414 aa18.86■□□□□ 0.61
TRAPPC11-201ENST00000334690 LARSQ9P2J5 1176 aaKnown RBP18.86■□□□□ 0.61
TRAPPC11-201ENST00000334690 DDX39AO00148 427 aaKnown RBP18.86■□□□□ 0.61
TRAPPC11-201ENST00000334690 GAS8O95995 478 aa18.86■□□□□ 0.61
TRAPPC11-201ENST00000334690 ARHGAP25P42331 645 aa18.86■□□□□ 0.61
TRAPPC11-201ENST00000334690 CABS1Q96KC9 395 aa18.86■□□□□ 0.61
TRAPPC11-201ENST00000334690 SLC39A2Q9NP94 309 aa18.86■□□□□ 0.61
TRAPPC11-201ENST00000334690 PANK4Q9NVE7 773 aa18.86■□□□□ 0.61
TRAPPC11-201ENST00000334690 STIM2Q9P246 746 aa18.86■□□□□ 0.61
TRAPPC11-201ENST00000334690 LACTBP83111 547 aaPredicted RBP18.86■□□□□ 0.61
TRAPPC11-201ENST00000334690 KRT71Q3SY84 523 aa18.86■□□□□ 0.61
TRAPPC11-201ENST00000334690 CCDC105Q8IYK2 499 aa18.86■□□□□ 0.61
TRAPPC11-201ENST00000334690 PCDHA4Q9UN74 947 aa18.86■□□□□ 0.61
TRAPPC11-201ENST00000334690 PRR16Q569H4 304 aa18.85■□□□□ 0.61
TRAPPC11-201ENST00000334690 UIMC1Q96RL1 719 aa18.85■□□□□ 0.61
TRAPPC11-201ENST00000334690 PARP2Q9UGN5 583 aa18.85■□□□□ 0.61
TRAPPC11-201ENST00000334690 DDX25Q9UHL0 483 aaKnown RBP18.85■□□□□ 0.61
TRAPPC11-201ENST00000334690 RNF17Q9BXT8 1623 aaKnown RBP18.85■□□□□ 0.61
TRAPPC11-201ENST00000334690 ATP8B1O43520 1251 aa18.85■□□□□ 0.61
TRAPPC11-201ENST00000334690 SRGAP1Q7Z6B7 1085 aa18.85■□□□□ 0.61
TRAPPC11-201ENST00000334690 LRRC47Q8N1G4 583 aaKnown RBP18.85■□□□□ 0.61
TRAPPC11-201ENST00000334690 MED4Q9NPJ6 270 aa18.85■□□□□ 0.61
TRAPPC11-201ENST00000334690 FAM169AQ9Y6X4 670 aa18.85■□□□□ 0.61
TRAPPC11-201ENST00000334690 XDHP47989 1333 aa18.85■□□□□ 0.61
TRAPPC11-201ENST00000334690 H2AFZP0C0S5 128 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms