RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 ZBED4O75132 1171 aa17.94■□□□□ 0.46
PTCH1-201ENST00000331920 YWHAEP62258 255 aaKnown RBP17.94■□□□□ 0.46
PTCH1-201ENST00000331920 DAAM1Q9Y4D1 1078 aa17.94■□□□□ 0.46
PTCH1-201ENST00000331920 SMAP1Q8IYB5 467 aaPredicted RBP17.94■□□□□ 0.46
PTCH1-201ENST00000331920 TESPA1A2RU30 521 aaPredicted RBP17.94■□□□□ 0.46
PTCH1-201ENST00000331920 IL15P40933 162 aaPredicted RBP17.94■□□□□ 0.46
PTCH1-201ENST00000331920 ARHGEF16Q5VV41 709 aa17.94■□□□□ 0.46
PTCH1-201ENST00000331920 NAA35Q5VZE5 725 aa17.94■□□□□ 0.46
PTCH1-201ENST00000331920 C16orf87Q6PH81 154 aa17.94■□□□□ 0.46
PTCH1-201ENST00000331920 HOMER3Q9NSC5 361 aa17.94■□□□□ 0.46
PTCH1-201ENST00000331920 KDRP35968 1356 aa17.94■□□□□ 0.46
PTCH1-201ENST00000331920 NCF2P19878 526 aaPredicted RBP17.94■□□□□ 0.46
PTCH1-201ENST00000331920 IGBP1P78318 339 aa17.94■□□□□ 0.46
PTCH1-201ENST00000331920 PPHLN1Q8NEY8 458 aaKnown RBP17.94■□□□□ 0.46
PTCH1-201ENST00000331920 IFNAR2P48551 515 aa17.94■□□□□ 0.46
PTCH1-201ENST00000331920 E2F5Q15329 346 aa17.94■□□□□ 0.46
PTCH1-201ENST00000331920 NONOQ15233 471 aaKnown RBP eCLIP17.93■□□□□ 0.46
PTCH1-201ENST00000331920 TPTE2Q6XPS3 522 aa17.93■□□□□ 0.46
PTCH1-201ENST00000331920 BNIP3LO60238 219 aa17.93■□□□□ 0.46
PTCH1-201ENST00000331920 PIK3CAP42336 1068 aa17.93■□□□□ 0.46
PTCH1-201ENST00000331920 DHX32Q7L7V1 743 aaKnown RBP17.93■□□□□ 0.46
PTCH1-201ENST00000331920 RBM17Q96I25 401 aaKnown RBP17.93■□□□□ 0.46
PTCH1-201ENST00000331920 SYTL2Q9HCH5 934 aa17.93■□□□□ 0.46
PTCH1-201ENST00000331920 V9GY48 417 aaPredicted RBP17.93■□□□□ 0.46
PTCH1-201ENST00000331920 CAPRIN1Q14444 709 aaKnown RBP17.93■□□□□ 0.46
PTCH1-201ENST00000331920 RAPGEF5Q92565 580 aa17.93■□□□□ 0.46
PTCH1-201ENST00000331920 CDKL2Q92772 493 aa17.93■□□□□ 0.46
PTCH1-201ENST00000331920 OTULINQ96BN8 352 aa17.93■□□□□ 0.46
PTCH1-201ENST00000331920 COG4Q9H9E3 785 aa17.93■□□□□ 0.46
PTCH1-201ENST00000331920 SLC8A1P32418 973 aa17.93■□□□□ 0.46
PTCH1-201ENST00000331920 TUBB2AQ13885 445 aa17.93■□□□□ 0.46
PTCH1-201ENST00000331920 TUBB2BQ9BVA1 445 aa17.93■□□□□ 0.46
PTCH1-201ENST00000331920 CAPS2Q9BXY5 557 aa17.93■□□□□ 0.46
PTCH1-201ENST00000331920 CPA1P15085 419 aa17.93■□□□□ 0.46
PTCH1-201ENST00000331920 LIG4P49917 911 aa17.93■□□□□ 0.46
PTCH1-201ENST00000331920 ARMT1Q9H993 441 aa17.93■□□□□ 0.46
PTCH1-201ENST00000331920 MOSPD1Q9UJG1 213 aa17.93■□□□□ 0.46
PTCH1-201ENST00000331920 LRPPRCP42704 1394 aaKnown RBP17.93■□□□□ 0.46
PTCH1-201ENST00000331920 IRS4O14654 1257 aaPredicted RBP17.93■□□□□ 0.46
PTCH1-201ENST00000331920 CFLARO15519 480 aa17.93■□□□□ 0.46
PTCH1-201ENST00000331920 OTUD6AQ7L8S5 288 aa17.93■□□□□ 0.46
PTCH1-201ENST00000331920 TRMT44Q8IYL2 757 aaKnown RBP17.93■□□□□ 0.46
PTCH1-201ENST00000331920 GDAP1Q8TB36 358 aa17.93■□□□□ 0.46
PTCH1-201ENST00000331920 EYA3Q99504 573 aa17.93■□□□□ 0.46
PTCH1-201ENST00000331920 PDZD4Q76G19 769 aaPredicted RBP17.92■□□□□ 0.46
PTCH1-201ENST00000331920 GIMAP4Q9NUV9 329 aa17.92■□□□□ 0.46
PTCH1-201ENST00000331920 DACH2Q96NX9 599 aa17.92■□□□□ 0.46
PTCH1-201ENST00000331920 TSKSQ9UJT2 592 aa17.92■□□□□ 0.46
PTCH1-201ENST00000331920 H0YC42 278 aa17.92■□□□□ 0.46
PTCH1-201ENST00000331920 EXT2Q93063 718 aa17.92■□□□□ 0.46
PTCH1-201ENST00000331920 ZNF148Q9UQR1 794 aa17.92■□□□□ 0.46
PTCH1-201ENST00000331920 SYCE1LA8MT33 242 aa17.92■□□□□ 0.46
PTCH1-201ENST00000331920 UFL1O94874 794 aa17.92■□□□□ 0.46
PTCH1-201ENST00000331920 PDE6CP51160 858 aa17.92■□□□□ 0.46
PTCH1-201ENST00000331920 YWHAHQ04917 246 aaPredicted RBP17.92■□□□□ 0.46
PTCH1-201ENST00000331920 PPP2R5EQ16537 467 aa17.92■□□□□ 0.46
PTCH1-201ENST00000331920 KCTD16Q68DU8 428 aa17.92■□□□□ 0.46
PTCH1-201ENST00000331920 RBM46Q8TBY0 533 aaKnown RBP17.92■□□□□ 0.46
PTCH1-201ENST00000331920 TYW1Q9NV66 732 aaKnown RBP17.92■□□□□ 0.46
PTCH1-201ENST00000331920 TNNC2P02585 160 aa17.92■□□□□ 0.46
PTCH1-201ENST00000331920 Q3C1V9 767 aa17.92■□□□□ 0.46
PTCH1-201ENST00000331920 GOLGA8QA0A0J9YX86 632 aa17.92■□□□□ 0.46
PTCH1-201ENST00000331920 GOLGA8OA6NCC3 632 aa17.92■□□□□ 0.46
PTCH1-201ENST00000331920 GOLGA8NF8WBI6 632 aa17.92■□□□□ 0.46
PTCH1-201ENST00000331920 TMOD1P28289 359 aa17.92■□□□□ 0.46
PTCH1-201ENST00000331920 BFSP1Q12934 665 aa17.92■□□□□ 0.46
PTCH1-201ENST00000331920 TTC6Q86TZ1 520 aa17.92■□□□□ 0.46
PTCH1-201ENST00000331920 PRPF38AQ8NAV1 312 aaKnown RBP17.92■□□□□ 0.46
PTCH1-201ENST00000331920 KCNA1Q09470 495 aa17.91■□□□□ 0.46
PTCH1-201ENST00000331920 ZKSCAN8Q15776 578 aaPredicted RBP17.91■□□□□ 0.46
PTCH1-201ENST00000331920 CCPG1Q9ULG6 757 aa17.91■□□□□ 0.46
PTCH1-201ENST00000331920 SLC1A4P43007 532 aa17.91■□□□□ 0.46
PTCH1-201ENST00000331920 RFX6Q8HWS3 928 aa17.91■□□□□ 0.46
PTCH1-201ENST00000331920 CEP70Q8NHQ1 597 aa17.91■□□□□ 0.46
PTCH1-201ENST00000331920 ABCC11Q96J66 1382 aa17.91■□□□□ 0.46
PTCH1-201ENST00000331920 SOX5P35711 763 aa17.91■□□□□ 0.46
PTCH1-201ENST00000331920 POSTNQ15063 836 aa17.91■□□□□ 0.46
PTCH1-201ENST00000331920 TTC38Q5R3I4 469 aa17.91■□□□□ 0.46
PTCH1-201ENST00000331920 MLXIPQ9HAP2 919 aa17.91■□□□□ 0.46
PTCH1-201ENST00000331920 SCOCQ9UIL1 159 aa17.91■□□□□ 0.46
PTCH1-201ENST00000331920 PHF8Q9UPP1 1060 aa17.91■□□□□ 0.46
PTCH1-201ENST00000331920 GRAMD4Q6IC98 578 aa17.91■□□□□ 0.46
PTCH1-201ENST00000331920 PHKBQ93100 1093 aa17.91■□□□□ 0.46
PTCH1-201ENST00000331920 CSRNP1Q96S65 589 aa17.91■□□□□ 0.46
PTCH1-201ENST00000331920 NCOA5Q9HCD5 579 aaKnown RBP17.91■□□□□ 0.46
PTCH1-201ENST00000331920 SAR1BQ9Y6B6 198 aa17.91■□□□□ 0.46
PTCH1-201ENST00000331920 TOM1L1O75674 476 aa17.91■□□□□ 0.46
PTCH1-201ENST00000331920 KIF19Q2TAC6 998 aa17.91■□□□□ 0.46
PTCH1-201ENST00000331920 SPATS2LQ9NUQ6 558 aaKnown RBP17.91■□□□□ 0.46
PTCH1-201ENST00000331920 SLC52A1Q9NWF4 448 aa17.91■□□□□ 0.46
PTCH1-201ENST00000331920 RAPGEF3O95398 923 aa17.91■□□□□ 0.46
PTCH1-201ENST00000331920 CCDC159P0C7I6 412 aa17.9■□□□□ 0.46
PTCH1-201ENST00000331920 STAT1P42224 750 aa17.9■□□□□ 0.46
PTCH1-201ENST00000331920 CFAP65Q6ZU64 1925 aaKnown RBP17.9■□□□□ 0.46
PTCH1-201ENST00000331920 ARHGEF9O43307 516 aa17.9■□□□□ 0.46
PTCH1-201ENST00000331920 UBE3AQ05086 875 aa17.9■□□□□ 0.46
PTCH1-201ENST00000331920 WDR91A4D1P6 747 aa17.9■□□□□ 0.46
PTCH1-201ENST00000331920 DEXIO95424 95 aa17.9■□□□□ 0.46
PTCH1-201ENST00000331920 ADCY7P51828 1080 aa17.9■□□□□ 0.46
PTCH1-201ENST00000331920 ANO1Q5XXA6 986 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms