RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 CHRNA5P30532 468 aa10.67□□□□□ -0.7
SS18L1-201ENST00000331758 TXNRD3Q86VQ6 643 aa10.67□□□□□ -0.7
SS18L1-201ENST00000331758 CHURC1Q8WUH1 139 aa10.67□□□□□ -0.7
SS18L1-201ENST00000331758 SRRTQ9BXP5 876 aaKnown RBP10.67□□□□□ -0.7
SS18L1-201ENST00000331758 GOLPH3LQ9H4A5 285 aa10.67□□□□□ -0.7
SS18L1-201ENST00000331758 KANSL2Q9H9L4 492 aa10.67□□□□□ -0.7
SS18L1-201ENST00000331758 CTDNEP1O95476 244 aa10.66□□□□□ -0.7
SS18L1-201ENST00000331758 FGFR2P21802 821 aa10.66□□□□□ -0.7
SS18L1-201ENST00000331758 CRKP46108 304 aa10.66□□□□□ -0.7
SS18L1-201ENST00000331758 SMAP1Q8IYB5 467 aaPredicted RBP10.66□□□□□ -0.7
SS18L1-201ENST00000331758 CEP95Q96GE4 821 aa10.66□□□□□ -0.7
SS18L1-201ENST00000331758 GOPCQ9HD26 462 aa10.66□□□□□ -0.7
SS18L1-201ENST00000331758 GUCA1BQ9UMX6 200 aa10.66□□□□□ -0.7
SS18L1-201ENST00000331758 PLEKHG2Q9H7P9 1386 aa10.66□□□□□ -0.7
SS18L1-201ENST00000331758 AKAP12Q02952 1782 aa10.66□□□□□ -0.7
SS18L1-201ENST00000331758 KRT9P35527 623 aa10.66□□□□□ -0.7
SS18L1-201ENST00000331758 TRAPPC10P48553 1259 aa10.66□□□□□ -0.7
SS18L1-201ENST00000331758 FAM193AP78312 1265 aa10.66□□□□□ -0.7
SS18L1-201ENST00000331758 PODNQ7Z5L7 613 aa10.66□□□□□ -0.7
SS18L1-201ENST00000331758 KCNB2Q92953 911 aa10.66□□□□□ -0.7
SS18L1-201ENST00000331758 KIF1AQ12756 1690 aa10.66□□□□□ -0.7
SS18L1-201ENST00000331758 H7C1D1 291 aa10.66□□□□□ -0.7
SS18L1-201ENST00000331758 BACH1O14867 736 aa10.66□□□□□ -0.7
SS18L1-201ENST00000331758 FDPSP14324 419 aaKnown RBP10.66□□□□□ -0.7
SS18L1-201ENST00000331758 SSR1P43307 286 aaKnown RBP10.66□□□□□ -0.7
SS18L1-201ENST00000331758 ADKP55263 362 aaKnown RBP10.66□□□□□ -0.7
SS18L1-201ENST00000331758 AOC3Q16853 763 aa10.66□□□□□ -0.7
SS18L1-201ENST00000331758 CCDC93Q567U6 631 aa10.66□□□□□ -0.7
SS18L1-201ENST00000331758 DCAF17Q5H9S7 520 aaPredicted RBP10.66□□□□□ -0.7
SS18L1-201ENST00000331758 AXDND1Q5T1B0 1012 aaPredicted RBP10.66□□□□□ -0.7
SS18L1-201ENST00000331758 MIGA2Q7L4E1 593 aa10.66□□□□□ -0.7
SS18L1-201ENST00000331758 SP8Q8IXZ3 490 aa10.66□□□□□ -0.7
SS18L1-201ENST00000331758 NEK11Q8NG66 645 aa10.66□□□□□ -0.7
SS18L1-201ENST00000331758 SRPRBQ9Y5M8 271 aaKnown RBP10.66□□□□□ -0.7
SS18L1-201ENST00000331758 PAFAH1B1P43034 410 aa10.66□□□□□ -0.7
SS18L1-201ENST00000331758 C12orf60Q5U649 245 aa10.66□□□□□ -0.7
SS18L1-201ENST00000331758 IQCEQ6IPM2 695 aa10.66□□□□□ -0.7
SS18L1-201ENST00000331758 DNM3Q9UQ16 869 aa10.66□□□□□ -0.7
SS18L1-201ENST00000331758 TMCO5BA8MYB1 307 aa10.65□□□□□ -0.7
SS18L1-201ENST00000331758 NF2P35240 595 aa10.65□□□□□ -0.7
SS18L1-201ENST00000331758 LONP1P36776 959 aaKnown RBP10.65□□□□□ -0.7
SS18L1-201ENST00000331758 GTPBP4Q9BZE4 634 aaKnown RBP10.65□□□□□ -0.7
SS18L1-201ENST00000331758 DHX36Q9H2U1 1008 aaKnown RBP10.65□□□□□ -0.7
SS18L1-201ENST00000331758 CGNQ9P2M7 1197 aaKnown RBP10.65□□□□□ -0.7
SS18L1-201ENST00000331758 DDX25Q9UHL0 483 aaKnown RBP10.65□□□□□ -0.7
SS18L1-201ENST00000331758 TNS2Q63HR2 1409 aa10.65□□□□□ -0.7
SS18L1-201ENST00000331758 WTIPA6NIX2 430 aaPredicted RBP10.65□□□□□ -0.7
SS18L1-201ENST00000331758 USP17L5A8MUK1 530 aa10.65□□□□□ -0.7
SS18L1-201ENST00000331758 ALAS1P13196 640 aa10.65□□□□□ -0.7
SS18L1-201ENST00000331758 TNFAIP1Q13829 316 aa10.65□□□□□ -0.7
SS18L1-201ENST00000331758 TIGD1Q96MW7 591 aa10.65□□□□□ -0.7
SS18L1-201ENST00000331758 MTA3Q9BTC8 594 aa10.65□□□□□ -0.7
SS18L1-201ENST00000331758 AMNQ9BXJ7 453 aa10.65□□□□□ -0.7
SS18L1-201ENST00000331758 IMPACTQ9P2X3 320 aa10.65□□□□□ -0.7
SS18L1-201ENST00000331758 DLG5Q8TDM6 1919 aa10.65□□□□□ -0.7
SS18L1-201ENST00000331758 STK36Q9NRP7 1315 aa10.65□□□□□ -0.7
SS18L1-201ENST00000331758 GTPBP6O43824 516 aaPredicted RBP10.65□□□□□ -0.7
SS18L1-201ENST00000331758 KRT13P13646 458 aa10.65□□□□□ -0.7
SS18L1-201ENST00000331758 SPECC1LQ69YQ0 1117 aa10.65□□□□□ -0.7
SS18L1-201ENST00000331758 LRP10Q7Z4F1 713 aa10.65□□□□□ -0.7
SS18L1-201ENST00000331758 STAG2Q8N3U4 1231 aa10.65□□□□□ -0.7
SS18L1-201ENST00000331758 MRFAP1L1Q96HT8 127 aa10.65□□□□□ -0.7
SS18L1-201ENST00000331758 MXD3Q9BW11 206 aa10.65□□□□□ -0.7
SS18L1-201ENST00000331758 CCDC94Q9BW85 323 aaPredicted RBP10.65□□□□□ -0.7
SS18L1-201ENST00000331758 SLFN14P0C7P3 912 aa10.64□□□□□ -0.71
SS18L1-201ENST00000331758 PTPREP23469 700 aa10.64□□□□□ -0.71
SS18L1-201ENST00000331758 ZNF569Q5MCW4 686 aa10.64□□□□□ -0.71
SS18L1-201ENST00000331758 TRIML1Q8N9V2 468 aa10.64□□□□□ -0.71
SS18L1-201ENST00000331758 ALS2CR12Q96Q35 445 aa10.64□□□□□ -0.71
SS18L1-201ENST00000331758 ECE2O60344 883 aa10.64□□□□□ -0.71
SS18L1-201ENST00000331758 ZBTB7AO95365 584 aa10.64□□□□□ -0.71
SS18L1-201ENST00000331758 GYS1P13807 737 aa10.64□□□□□ -0.71
SS18L1-201ENST00000331758 CASP1P29466 404 aa10.64□□□□□ -0.71
SS18L1-201ENST00000331758 PPP1R2P41236 205 aa10.64□□□□□ -0.71
SS18L1-201ENST00000331758 CYP4A11Q02928 519 aa10.64□□□□□ -0.71
SS18L1-201ENST00000331758 UBE2SQ16763 222 aa10.64□□□□□ -0.71
SS18L1-201ENST00000331758 TPH2Q8IWU9 490 aa10.64□□□□□ -0.71
SS18L1-201ENST00000331758 CRAMP1Q96RY5 1269 aa10.64□□□□□ -0.71
SS18L1-201ENST00000331758 PYCARDQ9ULZ3 195 aa10.64□□□□□ -0.71
SS18L1-201ENST00000331758 ORC4O43929 436 aa10.64□□□□□ -0.71
SS18L1-201ENST00000331758 SLU7O95391 586 aaKnown RBP10.64□□□□□ -0.71
SS18L1-201ENST00000331758 MYCNP04198 464 aaPredicted RBP10.64□□□□□ -0.71
SS18L1-201ENST00000331758 RPN1P04843 607 aaKnown RBP10.64□□□□□ -0.71
SS18L1-201ENST00000331758 UBXN2AP68543 259 aa10.64□□□□□ -0.71
SS18L1-201ENST00000331758 KIF5AQ12840 1032 aa10.64□□□□□ -0.71
SS18L1-201ENST00000331758 FMR1NBQ8N0W7 255 aaPredicted RBP10.64□□□□□ -0.71
SS18L1-201ENST00000331758 CCDC102AQ96A19 550 aa10.64□□□□□ -0.71
SS18L1-201ENST00000331758 SLC39A2Q9NP94 309 aa10.64□□□□□ -0.71
SS18L1-201ENST00000331758 GH2P01242 217 aa10.64□□□□□ -0.71
SS18L1-201ENST00000331758 SNAP25P60880 206 aa10.64□□□□□ -0.71
SS18L1-201ENST00000331758 PFKFB3Q16875 520 aaPredicted RBP10.64□□□□□ -0.71
SS18L1-201ENST00000331758 SLC10A5Q5PT55 438 aa10.64□□□□□ -0.71
SS18L1-201ENST00000331758 TCHPQ9BT92 498 aa10.64□□□□□ -0.71
SS18L1-201ENST00000331758 TMOD4Q9NZQ9 345 aa10.64□□□□□ -0.71
SS18L1-201ENST00000331758 ARHGEF35A5YM69 484 aa10.63□□□□□ -0.71
SS18L1-201ENST00000331758 SRBD1Q8N5C6 995 aaKnown RBP10.63□□□□□ -0.71
SS18L1-201ENST00000331758 GSDMAQ96QA5 445 aa10.63□□□□□ -0.71
SS18L1-201ENST00000331758 ZNF408Q9H9D4 720 aa10.63□□□□□ -0.71
SS18L1-201ENST00000331758 HPS5Q9UPZ3 1129 aa10.63□□□□□ -0.71
SS18L1-201ENST00000331758 UBE2Q2LH0YL09 131 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms