RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 PHACTR2O75167 634 aa19.58■□□□□ 0.72
PTP4A3-201ENST00000329397 PPP2R5BQ15173 497 aa19.58■□□□□ 0.72
PTP4A3-201ENST00000329397 BEND6Q5SZJ8 279 aaPredicted RBP19.58■□□□□ 0.72
PTP4A3-201ENST00000329397 JAKMIP3Q5VZ66 844 aa19.58■□□□□ 0.72
PTP4A3-201ENST00000329397 IRF2BP1Q8IU81 584 aa19.58■□□□□ 0.72
PTP4A3-201ENST00000329397 TMEM60Q9H2L4 133 aa19.58■□□□□ 0.72
PTP4A3-201ENST00000329397 RWDD2AQ9UIY3 292 aa19.58■□□□□ 0.72
PTP4A3-201ENST00000329397 GTPBP6O43824 516 aaPredicted RBP19.57■□□□□ 0.72
PTP4A3-201ENST00000329397 LMAN1P49257 510 aa19.57■□□□□ 0.72
PTP4A3-201ENST00000329397 LRRC15Q8TF66 581 aa19.57■□□□□ 0.72
PTP4A3-201ENST00000329397 DYNLL2Q96FJ2 89 aa19.57■□□□□ 0.72
PTP4A3-201ENST00000329397 NAPGQ99747 312 aaPredicted RBP19.57■□□□□ 0.72
PTP4A3-201ENST00000329397 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.57■□□□□ 0.722e-6■■■■■ 27.3
PTP4A3-201ENST00000329397 SRGAP2O75044 1071 aa19.57■□□□□ 0.72
PTP4A3-201ENST00000329397 DDAH1O94760 285 aa19.57■□□□□ 0.72
PTP4A3-201ENST00000329397 ADAMTS2O95450 1211 aa19.57■□□□□ 0.72
PTP4A3-201ENST00000329397 KLK7P49862 253 aa19.57■□□□□ 0.72
PTP4A3-201ENST00000329397 TAF3Q5VWG9 929 aa19.57■□□□□ 0.72
PTP4A3-201ENST00000329397 VPS18Q9P253 973 aa19.57■□□□□ 0.72
PTP4A3-201ENST00000329397 GOLGB1Q14789 3259 aaKnown RBP19.57■□□□□ 0.72
PTP4A3-201ENST00000329397 A0A1B0GUL6 1792 aa19.56■□□□□ 0.72
PTP4A3-201ENST00000329397 NKRFO15226 690 aaKnown RBP eCLIP19.56■□□□□ 0.721e-6■■■□□ 15.8
PTP4A3-201ENST00000329397 BMP15O95972 392 aa19.56■□□□□ 0.72
PTP4A3-201ENST00000329397 PFKFB3Q16875 520 aaPredicted RBP19.56■□□□□ 0.72
PTP4A3-201ENST00000329397 ZNF658Q5TYW1 1059 aaPredicted RBP19.56■□□□□ 0.72
PTP4A3-201ENST00000329397 RCSD1Q6JBY9 416 aa19.56■□□□□ 0.72
PTP4A3-201ENST00000329397 TXNRD3Q86VQ6 643 aa19.56■□□□□ 0.72
PTP4A3-201ENST00000329397 TMTC1Q8IUR5 882 aa19.56■□□□□ 0.72
PTP4A3-201ENST00000329397 CEP112Q8N8E3 955 aa19.56■□□□□ 0.72
PTP4A3-201ENST00000329397 HINFPQ9BQA5 517 aa19.56■□□□□ 0.72
PTP4A3-201ENST00000329397 MCM9Q9NXL9 1143 aa19.56■□□□□ 0.72
PTP4A3-201ENST00000329397 TTF2Q9UNY4 1162 aaKnown RBP19.56■□□□□ 0.72
PTP4A3-201ENST00000329397 ATP8B1O43520 1251 aa19.56■□□□□ 0.72
PTP4A3-201ENST00000329397 PARP1P09874 1014 aaKnown RBP19.56■□□□□ 0.72
PTP4A3-201ENST00000329397 CALM1P0DP23 149 aa19.56■□□□□ 0.72
PTP4A3-201ENST00000329397 CALM2P0DP24 149 aa19.56■□□□□ 0.72
PTP4A3-201ENST00000329397 CALM3P0DP25 149 aa19.56■□□□□ 0.72
PTP4A3-201ENST00000329397 NAALADL2Q58DX5 795 aa19.56■□□□□ 0.72
PTP4A3-201ENST00000329397 CYP26C1Q6V0L0 522 aa19.56■□□□□ 0.72
PTP4A3-201ENST00000329397 ADAM21Q9UKJ8 722 aa19.56■□□□□ 0.72
PTP4A3-201ENST00000329397 SEMA3EO15041 775 aa19.55■□□□□ 0.72
PTP4A3-201ENST00000329397 INF2Q27J81 1249 aa19.55■□□□□ 0.72
PTP4A3-201ENST00000329397 CALCOCO1Q9P1Z2 691 aa19.55■□□□□ 0.72
PTP4A3-201ENST00000329397 ITIH6Q6UXX5 1313 aa19.55■□□□□ 0.72
PTP4A3-201ENST00000329397 SLC44A5Q8NCS7 719 aa19.55■□□□□ 0.72
PTP4A3-201ENST00000329397 GDAP1L1Q96MZ0 367 aa19.55■□□□□ 0.72
PTP4A3-201ENST00000329397 USP17L3A6NCW0 530 aa19.55■□□□□ 0.72
PTP4A3-201ENST00000329397 USP17L4A6NCW7 530 aa19.55■□□□□ 0.72
PTP4A3-201ENST00000329397 FAM193AP78312 1265 aa19.55■□□□□ 0.72
PTP4A3-201ENST00000329397 IRX5P78411 483 aaPredicted RBP19.55■□□□□ 0.72
PTP4A3-201ENST00000329397 BRD3Q15059 726 aa19.55■□□□□ 0.72
PTP4A3-201ENST00000329397 USP17L1Q7RTZ2 530 aa19.55■□□□□ 0.72
PTP4A3-201ENST00000329397 BLIDQ8IZY5 108 aa19.55■□□□□ 0.72
PTP4A3-201ENST00000329397 C4orf32Q8N8J7 132 aa19.55■□□□□ 0.72
PTP4A3-201ENST00000329397 CAPZA3Q96KX2 299 aa19.55■□□□□ 0.72
PTP4A3-201ENST00000329397 CTAGE15A4D2H0 777 aa19.54■□□□□ 0.72
PTP4A3-201ENST00000329397 MAP2K7O14733 419 aa19.54■□□□□ 0.72
PTP4A3-201ENST00000329397 CTAGE8P0CG41 777 aa19.54■□□□□ 0.72
PTP4A3-201ENST00000329397 GOLGA8HP0CJ92 632 aa19.54■□□□□ 0.72
PTP4A3-201ENST00000329397 UBE4AQ14139 1066 aa19.54■□□□□ 0.72
PTP4A3-201ENST00000329397 SLC35G1Q2M3R5 365 aa19.54■□□□□ 0.72
PTP4A3-201ENST00000329397 CTAGE6Q86UF2 777 aa19.54■□□□□ 0.72
PTP4A3-201ENST00000329397 CTAGE4Q8IX94 777 aa19.54■□□□□ 0.72
PTP4A3-201ENST00000329397 EPN1Q9Y6I3 576 aaPredicted RBP19.54■□□□□ 0.72
PTP4A3-201ENST00000329397 LRRC10BA6NIK2 292 aa19.54■□□□□ 0.72
PTP4A3-201ENST00000329397 NDUFA10O95299 355 aa19.54■□□□□ 0.72
PTP4A3-201ENST00000329397 FGRP09769 529 aa19.54■□□□□ 0.72
PTP4A3-201ENST00000329397 TFAP4Q01664 338 aa19.54■□□□□ 0.72
PTP4A3-201ENST00000329397 DDB1Q16531 1140 aa19.54■□□□□ 0.72
PTP4A3-201ENST00000329397 DISC1Q9NRI5 854 aa19.54■□□□□ 0.72
PTP4A3-201ENST00000329397 B4DLN1 442 aa19.53■□□□□ 0.72
PTP4A3-201ENST00000329397 ZMYND10O75800 440 aa19.53■□□□□ 0.72
PTP4A3-201ENST00000329397 ERCC3P19447 782 aa19.53■□□□□ 0.72
PTP4A3-201ENST00000329397 CT47A1Q5JQC4 288 aaPredicted RBP19.53■□□□□ 0.72
PTP4A3-201ENST00000329397 HEATR3Q7Z4Q2 680 aa19.53■□□□□ 0.72
PTP4A3-201ENST00000329397 MARCH10Q8NA82 808 aaPredicted RBP19.53■□□□□ 0.72
PTP4A3-201ENST00000329397 ANKRD20A12PQ8NF67 263 aa19.53■□□□□ 0.72
PTP4A3-201ENST00000329397 HPS3Q969F9 1004 aa19.53■□□□□ 0.72
PTP4A3-201ENST00000329397 TRIM47Q96LD4 638 aa19.53■□□□□ 0.72
PTP4A3-201ENST00000329397 IL17RBQ9NRM6 502 aa19.53■□□□□ 0.72
PTP4A3-201ENST00000329397 AGPAT5Q9NUQ2 364 aa19.53■□□□□ 0.72
PTP4A3-201ENST00000329397 CCDC51Q96ER9 411 aa19.53■□□□□ 0.72
PTP4A3-201ENST00000329397 CRNKL1Q9BZJ0 848 aaKnown RBP19.53■□□□□ 0.72
PTP4A3-201ENST00000329397 BSDC1Q9NW68 430 aaPredicted RBP19.53■□□□□ 0.72
PTP4A3-201ENST00000329397 MYO6Q9UM54 1294 aa19.53■□□□□ 0.72
PTP4A3-201ENST00000329397 FECHP22830 423 aa19.52■□□□□ 0.72
PTP4A3-201ENST00000329397 MSANTD4Q8NCY6 345 aa19.52■□□□□ 0.72
PTP4A3-201ENST00000329397 KAT14Q9H8E8 782 aa19.52■□□□□ 0.72
PTP4A3-201ENST00000329397 FAN1Q9Y2M0 1017 aa19.52■□□□□ 0.72
PTP4A3-201ENST00000329397 ATP1A1P05023 1023 aaKnown RBP19.52■□□□□ 0.72
PTP4A3-201ENST00000329397 WDR59Q6PJI9 974 aa19.52■□□□□ 0.72
PTP4A3-201ENST00000329397 PNMA1Q8ND90 353 aa19.52■□□□□ 0.72
PTP4A3-201ENST00000329397 L1RE1Q9UN81 338 aa19.52■□□□□ 0.72
PTP4A3-201ENST00000329397 DUSP10Q9Y6W6 482 aa19.52■□□□□ 0.72
PTP4A3-201ENST00000329397 CAPN2P17655 700 aa19.51■□□□□ 0.71
PTP4A3-201ENST00000329397 HERVK_113P62684 666 aa19.51■□□□□ 0.71
PTP4A3-201ENST00000329397 ADSSL1Q8N142 457 aa19.51■□□□□ 0.71
PTP4A3-201ENST00000329397 MB21D1Q8N884 522 aa19.51■□□□□ 0.71
PTP4A3-201ENST00000329397 RAB21Q9UL25 225 aa19.51■□□□□ 0.71
PTP4A3-201ENST00000329397 CCDC194A0A1B0GVG4 234 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 183.7 ms