RNA–Protein interactions for RNA: ENST00000325327.3

LMNB2-201, Transcript of lamin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB2, Length 4,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-201ENST00000325327 LIFRP42702 1097 aa18.77■□□□□ 0.6
LMNB2-201ENST00000325327 APOBEC3FQ8IUX4 373 aaKnown RBP18.77■□□□□ 0.6
LMNB2-201ENST00000325327 TDRD7Q8NHU6 1098 aaKnown RBP18.77■□□□□ 0.6
LMNB2-201ENST00000325327 TAF4BQ92750 862 aa18.77■□□□□ 0.6
LMNB2-201ENST00000325327 TRIM6Q9C030 488 aaPredicted RBP18.77■□□□□ 0.6
LMNB2-201ENST00000325327 CLIC4Q9Y696 253 aa18.77■□□□□ 0.6
LMNB2-201ENST00000325327 IFNAR1P17181 557 aa18.76■□□□□ 0.59
LMNB2-201ENST00000325327 STAG1Q8WVM7 1258 aa18.76■□□□□ 0.59
LMNB2-201ENST00000325327 GPBP1L1Q9HC44 474 aaPredicted RBP18.76■□□□□ 0.59
LMNB2-201ENST00000325327 NEBLO76041 1014 aa18.76■□□□□ 0.59
LMNB2-201ENST00000325327 XKR9Q5GH70 373 aa18.76■□□□□ 0.59
LMNB2-201ENST00000325327 OR52Z1P0C646 297 aa18.76■□□□□ 0.59
LMNB2-201ENST00000325327 SLC10A5Q5PT55 438 aa18.76■□□□□ 0.59
LMNB2-201ENST00000325327 DEFB129Q9H1M3 183 aa18.76■□□□□ 0.59
LMNB2-201ENST00000325327 DDNO94850 711 aaPredicted RBP18.75■□□□□ 0.59
LMNB2-201ENST00000325327 GCNT3O95395 438 aa18.75■□□□□ 0.59
LMNB2-201ENST00000325327 RUFY1Q96T51 708 aa18.75■□□□□ 0.59
LMNB2-201ENST00000325327 VPS16Q9H269 839 aa18.75■□□□□ 0.59
LMNB2-201ENST00000325327 ZNF70Q9UC06 446 aaPredicted RBP18.75■□□□□ 0.59
LMNB2-201ENST00000325327 CTNND2Q9UQB3 1225 aa18.75■□□□□ 0.59
LMNB2-201ENST00000325327 LMNB1P20700 586 aa18.75■□□□□ 0.59
LMNB2-201ENST00000325327 FERMT2Q96AC1 680 aa18.75■□□□□ 0.59
LMNB2-201ENST00000325327 PRMT6Q96LA8 375 aaPredicted RBP18.75■□□□□ 0.59
LMNB2-201ENST00000325327 FNBP1Q96RU3 617 aa18.75■□□□□ 0.59
LMNB2-201ENST00000325327 OSBPL5Q9H0X9 879 aaPredicted RBP18.75■□□□□ 0.59
LMNB2-201ENST00000325327 SYNCQ9H7C4 482 aa18.75■□□□□ 0.59
LMNB2-201ENST00000325327 HACL1Q9UJ83 578 aa18.75■□□□□ 0.59
LMNB2-201ENST00000325327 USP17L15C9J2P7 530 aa18.75■□□□□ 0.59
LMNB2-201ENST00000325327 USP17L13C9JLJ4 530 aa18.75■□□□□ 0.59
LMNB2-201ENST00000325327 USP17L11C9JVI0 530 aa18.75■□□□□ 0.59
LMNB2-201ENST00000325327 USP17L18D6R9N7 530 aa18.75■□□□□ 0.59
LMNB2-201ENST00000325327 USP17L22D6RA61 530 aa18.75■□□□□ 0.59
LMNB2-201ENST00000325327 USP17L17D6RBQ6 530 aa18.75■□□□□ 0.59
LMNB2-201ENST00000325327 USP17L19D6RCP7 530 aa18.75■□□□□ 0.59
LMNB2-201ENST00000325327 USP17L20D6RJB6 530 aa18.75■□□□□ 0.59
LMNB2-201ENST00000325327 SPAG1Q07617 926 aa18.75■□□□□ 0.59
LMNB2-201ENST00000325327 USP17L24Q0WX57 530 aa18.75■□□□□ 0.59
LMNB2-201ENST00000325327 USP17L6PQ6QN14 398 aa18.75■□□□□ 0.59
LMNB2-201ENST00000325327 FHDC1Q9C0D6 1143 aaPredicted RBP18.75■□□□□ 0.59
LMNB2-201ENST00000325327 CXCL9Q07325 125 aa18.74■□□□□ 0.59
LMNB2-201ENST00000325327 C12orf60Q5U649 245 aa18.74■□□□□ 0.59
LMNB2-201ENST00000325327 TXLNBQ8N3L3 684 aa18.74■□□□□ 0.59
LMNB2-201ENST00000325327 MRPL44Q9H9J2 332 aaKnown RBP18.74■□□□□ 0.59
LMNB2-201ENST00000325327 MYOZ2Q9NPC6 264 aa18.74■□□□□ 0.59
LMNB2-201ENST00000325327 FLT1P17948 1338 aa18.74■□□□□ 0.59
LMNB2-201ENST00000325327 TRMT44Q8IYL2 757 aaKnown RBP18.74■□□□□ 0.59
LMNB2-201ENST00000325327 IFNKQ9P0W0 207 aa18.74■□□□□ 0.59
LMNB2-201ENST00000325327 TMCO5BA8MYB1 307 aa18.74■□□□□ 0.59
LMNB2-201ENST00000325327 RGS22Q8NE09 1264 aa18.74■□□□□ 0.59
LMNB2-201ENST00000325327 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.74■□□□□ 0.59
LMNB2-201ENST00000325327 ESPNB1AK53 854 aa18.74■□□□□ 0.59
LMNB2-201ENST00000325327 DKC1O60832 514 aaKnown RBP eCLIP18.74■□□□□ 0.597e-7■■■■□ 22.1
LMNB2-201ENST00000325327 UBXN1Q04323 297 aa18.74■□□□□ 0.59
LMNB2-201ENST00000325327 NFIAQ12857 509 aa18.74■□□□□ 0.59
LMNB2-201ENST00000325327 LRCH2Q5VUJ6 765 aa18.74■□□□□ 0.59
LMNB2-201ENST00000325327 TTC14Q96N46 770 aa18.74■□□□□ 0.59
LMNB2-201ENST00000325327 DNAI2Q9GZS0 605 aa18.74■□□□□ 0.59
LMNB2-201ENST00000325327 CAVIN2O95810 425 aa18.73■□□□□ 0.59
LMNB2-201ENST00000325327 RAPGEF1Q13905 1077 aa18.73■□□□□ 0.59
LMNB2-201ENST00000325327 DNM2P50570 870 aa18.73■□□□□ 0.59
LMNB2-201ENST00000325327 PRPF4BQ13523 1007 aaKnown RBP18.73■□□□□ 0.59
LMNB2-201ENST00000325327 KARSQ15046 597 aaKnown RBP18.73■□□□□ 0.59
LMNB2-201ENST00000325327 CCDC186Q7Z3E2 898 aa18.73■□□□□ 0.59
LMNB2-201ENST00000325327 FOSP01100 380 aaPredicted RBP18.73■□□□□ 0.59
LMNB2-201ENST00000325327 STRN3Q13033 797 aa18.73■□□□□ 0.59
LMNB2-201ENST00000325327 FAM102BQ5T8I3 360 aa18.73■□□□□ 0.59
LMNB2-201ENST00000325327 CCDC112Q8NEF3 446 aa18.73■□□□□ 0.59
LMNB2-201ENST00000325327 PFKFB1P16118 471 aa18.73■□□□□ 0.59
LMNB2-201ENST00000325327 RDXP35241 583 aaKnown RBP18.73■□□□□ 0.59
LMNB2-201ENST00000325327 PNOCQ13519 176 aa18.73■□□□□ 0.59
LMNB2-201ENST00000325327 GPBP1Q86WP2 473 aa18.73■□□□□ 0.59
LMNB2-201ENST00000325327 RGS12O14924 1447 aa18.72■□□□□ 0.59
LMNB2-201ENST00000325327 COL3A1P02461 1466 aaPredicted RBP18.72■□□□□ 0.59
LMNB2-201ENST00000325327 A0A087WWV3 80 aa18.72■□□□□ 0.59
LMNB2-201ENST00000325327 SNRNP48Q6IEG0 339 aaKnown RBP18.72■□□□□ 0.59
LMNB2-201ENST00000325327 CSGALNACT2Q8N6G5 542 aa18.72■□□□□ 0.59
LMNB2-201ENST00000325327 C16orf45Q96MC5 204 aaPredicted RBP18.72■□□□□ 0.59
LMNB2-201ENST00000325327 BICDL2A1A5D9 508 aa18.72■□□□□ 0.59
LMNB2-201ENST00000325327 STOX1Q6ZVD7 989 aa18.72■□□□□ 0.59
LMNB2-201ENST00000325327 CTNNBL1Q8WYA6 563 aaPredicted RBP18.72■□□□□ 0.59
LMNB2-201ENST00000325327 RPL13P26373 211 aaKnown RBP18.72■□□□□ 0.59
LMNB2-201ENST00000325327 ZNF577Q9BSK1 485 aa18.72■□□□□ 0.59
LMNB2-201ENST00000325327 URI1O94763 535 aaPredicted RBP18.71■□□□□ 0.59
LMNB2-201ENST00000325327 PCDHA7Q9UN72 937 aa18.71■□□□□ 0.59
LMNB2-201ENST00000325327 PCDHA4Q9UN74 947 aa18.71■□□□□ 0.59
LMNB2-201ENST00000325327 FRMD4BQ9Y2L6 1034 aa18.71■□□□□ 0.59
LMNB2-201ENST00000325327 MTMR2Q13614 643 aa18.71■□□□□ 0.59
LMNB2-201ENST00000325327 TTBK2Q6IQ55 1244 aa18.71■□□□□ 0.59
LMNB2-201ENST00000325327 IL25Q9H293 177 aa18.71■□□□□ 0.59
LMNB2-201ENST00000325327 TTC12Q9H892 705 aaPredicted RBP18.71■□□□□ 0.59
LMNB2-201ENST00000325327 KCNQ5Q9NR82 932 aa18.71■□□□□ 0.59
LMNB2-201ENST00000325327 KIAA1024Q9UPX6 916 aa18.71■□□□□ 0.59
LMNB2-201ENST00000325327 DISP2A7MBM2 1401 aa18.71■□□□□ 0.59
LMNB2-201ENST00000325327 MEIS1O00470 390 aa18.71■□□□□ 0.59
LMNB2-201ENST00000325327 TOB2Q14106 344 aaPredicted RBP18.71■□□□□ 0.59
LMNB2-201ENST00000325327 POSTNQ15063 836 aa18.71■□□□□ 0.59
LMNB2-201ENST00000325327 EXOC3O60645 756 aa18.71■□□□□ 0.59
LMNB2-201ENST00000325327 NR1I2O75469 434 aa18.71■□□□□ 0.59
LMNB2-201ENST00000325327 PTPN14Q15678 1187 aa18.71■□□□□ 0.59
LMNB2-201ENST00000325327 STAG2Q8N3U4 1231 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms