RNA–Protein interactions for RNA: ENST00000325167.9

CHMP6-201, Transcript of charged multivesicular body protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP6, Length 1,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-201ENST00000325167 SLC35G1Q2M3R5 365 aa21.96■■□□□ 1.11
CHMP6-201ENST00000325167 PPP1R18Q6NYC8 613 aa21.96■■□□□ 1.11
CHMP6-201ENST00000325167 ERCC4Q92889 916 aaPredicted RBP21.96■■□□□ 1.11
CHMP6-201ENST00000325167 SMARCE1Q969G3 411 aa21.96■■□□□ 1.11
CHMP6-201ENST00000325167 ZNF219Q9P2Y4 722 aaPredicted RBP21.96■■□□□ 1.11
CHMP6-201ENST00000325167 PCDHA6Q9UN73 950 aa21.96■■□□□ 1.11
CHMP6-201ENST00000325167 MTMR7Q9Y216 660 aa21.96■■□□□ 1.11
CHMP6-201ENST00000325167 PCDHA8Q9Y5H6 950 aa21.96■■□□□ 1.11
CHMP6-201ENST00000325167 ACTN4O43707 911 aaKnown RBP21.95■■□□□ 1.1
CHMP6-201ENST00000325167 SLFN14P0C7P3 912 aa21.95■■□□□ 1.1
CHMP6-201ENST00000325167 GOLGA8HP0CJ92 632 aa21.95■■□□□ 1.1
CHMP6-201ENST00000325167 GRIN1Q05586 938 aa21.95■■□□□ 1.1
CHMP6-201ENST00000325167 KCNQ5Q9NR82 932 aa21.95■■□□□ 1.1
CHMP6-201ENST00000325167 SERTAD1Q9UHV2 236 aa21.95■■□□□ 1.1
CHMP6-201ENST00000325167 PCDHA5Q9Y5H7 936 aa21.95■■□□□ 1.1
CHMP6-201ENST00000325167 USP17L5A8MUK1 530 aa21.95■■□□□ 1.1
CHMP6-201ENST00000325167 BIN1O00499 593 aa21.95■■□□□ 1.1
CHMP6-201ENST00000325167 VEGFAP15692 232 aaPredicted RBP21.95■■□□□ 1.1
CHMP6-201ENST00000325167 NFIAQ12857 509 aa21.95■■□□□ 1.1
CHMP6-201ENST00000325167 SPECC1Q5M775 1068 aa21.95■■□□□ 1.1
CHMP6-201ENST00000325167 MLKLQ8NB16 471 aa21.95■■□□□ 1.1
CHMP6-201ENST00000325167 CLIP2Q9UDT6 1046 aa21.95■■□□□ 1.1
CHMP6-201ENST00000325167 ZNF646O15015 1829 aaPredicted RBP21.94■■□□□ 1.1
CHMP6-201ENST00000325167 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.94■■□□□ 1.1
CHMP6-201ENST00000325167 C21orf2O43822 256 aa21.94■■□□□ 1.1
CHMP6-201ENST00000325167 MCM7P33993 719 aa21.94■■□□□ 1.1
CHMP6-201ENST00000325167 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.94■■□□□ 1.1
CHMP6-201ENST00000325167 SYMPKQ92797 1274 aaKnown RBP21.94■■□□□ 1.1
CHMP6-201ENST00000325167 KANSL2Q9H9L4 492 aa21.94■■□□□ 1.1
CHMP6-201ENST00000325167 HDAC9Q9UKV0 1011 aa21.94■■□□□ 1.1
CHMP6-201ENST00000325167 ATRNL1Q5VV63 1379 aa21.94■■□□□ 1.1
CHMP6-201ENST00000325167 GREB1LQ9C091 1923 aaPredicted RBP21.93■■□□□ 1.1
CHMP6-201ENST00000325167 NEMFO60524 1076 aa21.93■■□□□ 1.1
CHMP6-201ENST00000325167 PRPHP41219 470 aa21.93■■□□□ 1.1
CHMP6-201ENST00000325167 SARSP49591 514 aaKnown RBP21.93■■□□□ 1.1
CHMP6-201ENST00000325167 ZNF543Q08ER8 600 aa21.93■■□□□ 1.1
CHMP6-201ENST00000325167 TYW1BQ6NUM6 668 aa21.93■■□□□ 1.1
CHMP6-201ENST00000325167 IQUBQ8NA54 791 aa21.93■■□□□ 1.1
CHMP6-201ENST00000325167 MKL1Q969V6 931 aa21.93■■□□□ 1.1
CHMP6-201ENST00000325167 TMOD2Q9NZR1 351 aa21.93■■□□□ 1.1
CHMP6-201ENST00000325167 NYAP2Q9P242 653 aa21.93■■□□□ 1.1
CHMP6-201ENST00000325167 FAM198AQ9UFP1 575 aa21.93■■□□□ 1.1
CHMP6-201ENST00000325167 VWA3AA6NCI4 1184 aa21.92■■□□□ 1.1
CHMP6-201ENST00000325167 SMCO2A6NFE2 343 aa21.92■■□□□ 1.1
CHMP6-201ENST00000325167 MPHOSPH10O00566 681 aaKnown RBP21.92■■□□□ 1.1
CHMP6-201ENST00000325167 MYL5Q02045 173 aa21.92■■□□□ 1.1
CHMP6-201ENST00000325167 NONOQ15233 471 aaKnown RBP eCLIP21.92■■□□□ 1.1
CHMP6-201ENST00000325167 CERKLQ49MI3 558 aaPredicted RBP21.92■■□□□ 1.1
CHMP6-201ENST00000325167 ZSCAN29Q8IWY8 852 aaPredicted RBP21.92■■□□□ 1.1
CHMP6-201ENST00000325167 LRRC47Q8N1G4 583 aaKnown RBP21.92■■□□□ 1.1
CHMP6-201ENST00000325167 SPC24Q8NBT2 197 aa21.92■■□□□ 1.1
CHMP6-201ENST00000325167 ZNF526Q8TF50 670 aaPredicted RBP21.92■■□□□ 1.1
CHMP6-201ENST00000325167 SCN9AQ15858 1988 aa21.92■■□□□ 1.1
CHMP6-201ENST00000325167 CFAP100Q494V2 611 aa21.91■■□□□ 1.1
CHMP6-201ENST00000325167 NOM1Q5C9Z4 860 aaKnown RBP21.91■■□□□ 1.1
CHMP6-201ENST00000325167 TATDN1Q6P1N9 297 aa21.91■■□□□ 1.1
CHMP6-201ENST00000325167 HOMER1Q86YM7 354 aa21.91■■□□□ 1.1
CHMP6-201ENST00000325167 SPATA20Q8TB22 786 aa21.91■■□□□ 1.1
CHMP6-201ENST00000325167 PIGSQ96S52 555 aa21.91■■□□□ 1.1
CHMP6-201ENST00000325167 GLT8D2Q9H1C3 349 aa21.91■■□□□ 1.1
CHMP6-201ENST00000325167 PIM2Q9P1W9 311 aa21.91■■□□□ 1.1
CHMP6-201ENST00000325167 SYNPO2Q9UMS6 1093 aa21.91■■□□□ 1.1
CHMP6-201ENST00000325167 ADAMTSL1Q8N6G6 1762 aa21.91■■□□□ 1.1
CHMP6-201ENST00000325167 RSBN1LQ6PCB5 846 aaPredicted RBP21.91■■□□□ 1.1
CHMP6-201ENST00000325167 DTHD1Q6ZMT9 781 aa21.91■■□□□ 1.1
CHMP6-201ENST00000325167 ARHGAP27Q6ZUM4 889 aa21.91■■□□□ 1.1
CHMP6-201ENST00000325167 TMEM179Q6ZVK1 233 aa21.91■■□□□ 1.1
CHMP6-201ENST00000325167 SH3RF1Q7Z6J0 888 aa21.91■■□□□ 1.1
CHMP6-201ENST00000325167 C4orf32Q8N8J7 132 aa21.91■■□□□ 1.1
CHMP6-201ENST00000325167 DCAF4Q8WV16 495 aa21.91■■□□□ 1.1
CHMP6-201ENST00000325167 DHX58Q96C10 678 aa21.91■■□□□ 1.1
CHMP6-201ENST00000325167 BAZ2BQ9UIF8 2168 aaKnown RBP21.9■■□□□ 1.1
CHMP6-201ENST00000325167 PSME4Q14997 1843 aa21.9■■□□□ 1.1
CHMP6-201ENST00000325167 PNMA6FA0A0J9YX94 578 aa21.9■■□□□ 1.1
CHMP6-201ENST00000325167 WNT7AO00755 349 aa21.9■■□□□ 1.1
CHMP6-201ENST00000325167 OFD1O75665 1012 aa21.9■■□□□ 1.1
CHMP6-201ENST00000325167 REXO1Q8N1G1 1221 aaKnown RBP21.9■■□□□ 1.1
CHMP6-201ENST00000325167 PDILTQ8N807 584 aa21.9■■□□□ 1.1
CHMP6-201ENST00000325167 EPSTI1Q96J88 318 aa21.9■■□□□ 1.1
CHMP6-201ENST00000325167 MAN1B1Q9UKM7 699 aa21.9■■□□□ 1.1
CHMP6-201ENST00000325167 CBFA2T2O43439 604 aa21.89■■□□□ 1.1
CHMP6-201ENST00000325167 MORC3Q14149 939 aa21.89■■□□□ 1.1
CHMP6-201ENST00000325167 AK8Q96MA6 479 aa21.89■■□□□ 1.1
CHMP6-201ENST00000325167 GSDMAQ96QA5 445 aa21.89■■□□□ 1.1
CHMP6-201ENST00000325167 TTC12Q9H892 705 aaPredicted RBP21.89■■□□□ 1.1
CHMP6-201ENST00000325167 VAT1LQ9HCJ6 419 aa21.89■■□□□ 1.1
CHMP6-201ENST00000325167 IMPACTQ9P2X3 320 aa21.89■■□□□ 1.1
CHMP6-201ENST00000325167 ARFGEF1Q9Y6D6 1849 aa21.89■■□□□ 1.09
CHMP6-201ENST00000325167 FRMPD2Q68DX3 1309 aaPredicted RBP21.89■■□□□ 1.09
CHMP6-201ENST00000325167 A0A087WWV3 80 aa21.88■■□□□ 1.09
CHMP6-201ENST00000325167 YDJCA8MPS7 323 aa21.88■■□□□ 1.09
CHMP6-201ENST00000325167 VIL1P09327 827 aaKnown RBP21.88■■□□□ 1.09
CHMP6-201ENST00000325167 ADCY7P51828 1080 aa21.88■■□□□ 1.09
CHMP6-201ENST00000325167 TCP10Q12799 353 aa21.88■■□□□ 1.09
CHMP6-201ENST00000325167 SEMA3FQ13275 785 aa21.88■■□□□ 1.09
CHMP6-201ENST00000325167 NCAPHQ15003 741 aa21.88■■□□□ 1.09
CHMP6-201ENST00000325167 INF2Q27J81 1249 aa21.88■■□□□ 1.09
CHMP6-201ENST00000325167 DALRD3Q5D0E6 543 aaKnown RBP21.88■■□□□ 1.09
CHMP6-201ENST00000325167 USP49Q70CQ1 688 aa21.88■■□□□ 1.09
CHMP6-201ENST00000325167 NEK8Q86SG6 692 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms