RNA–Protein interactions for RNA: ENST00000315660.8

TSC22D3-201, Transcript of TSC22 domain family member 3, humanhuman

TSL 1 (best) BASIC

Gene TSC22D3, Length 2,213 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-201ENST00000315660 PCDHA6Q9UN73 950 aa17.74■□□□□ 0.43
TSC22D3-201ENST00000315660 PCDHA8Q9Y5H6 950 aa17.74■□□□□ 0.43
TSC22D3-201ENST00000315660 NAA30Q147X3 362 aaPredicted RBP17.73■□□□□ 0.43
TSC22D3-201ENST00000315660 PTPN21Q16825 1174 aa17.73■□□□□ 0.43
TSC22D3-201ENST00000315660 TXNRD1Q16881 649 aa17.73■□□□□ 0.43
TSC22D3-201ENST00000315660 RASGRP2Q7LDG7 609 aa17.73■□□□□ 0.43
TSC22D3-201ENST00000315660 CCDC12Q8WUD4 166 aaPredicted RBP17.73■□□□□ 0.43
TSC22D3-201ENST00000315660 DAGLAQ9Y4D2 1042 aa17.73■□□□□ 0.43
TSC22D3-201ENST00000315660 TUBB4AP04350 444 aa17.72■□□□□ 0.43
TSC22D3-201ENST00000315660 PARP1P09874 1014 aaKnown RBP17.72■□□□□ 0.43
TSC22D3-201ENST00000315660 CD44P16070 742 aaKnown RBP17.72■□□□□ 0.43
TSC22D3-201ENST00000315660 CUL4BQ13620 913 aa17.72■□□□□ 0.43
TSC22D3-201ENST00000315660 SPATA1Q5VX52 437 aa17.72■□□□□ 0.43
TSC22D3-201ENST00000315660 SPECC1LQ69YQ0 1117 aa17.72■□□□□ 0.43
TSC22D3-201ENST00000315660 PDXDC2PQ6P474 469 aa17.72■□□□□ 0.43
TSC22D3-201ENST00000315660 DDX41Q9UJV9 622 aaKnown RBP17.72■□□□□ 0.43
TSC22D3-201ENST00000315660 ATP6V0A2Q9Y487 856 aa17.72■□□□□ 0.43
TSC22D3-201ENST00000315660 STAMQ92783 540 aa17.72■□□□□ 0.43
TSC22D3-201ENST00000315660 CEP95Q96GE4 821 aa17.72■□□□□ 0.43
TSC22D3-201ENST00000315660 PPP1R13BQ96KQ4 1090 aa17.72■□□□□ 0.43
TSC22D3-201ENST00000315660 COA1Q9GZY4 146 aa17.72■□□□□ 0.43
TSC22D3-201ENST00000315660 TMX1Q9H3N1 280 aa17.72■□□□□ 0.43
TSC22D3-201ENST00000315660 RIMBP2O15034 1052 aa17.71■□□□□ 0.43
TSC22D3-201ENST00000315660 TBX2Q13207 712 aaPredicted RBP17.71■□□□□ 0.43
TSC22D3-201ENST00000315660 KLHL10Q6JEL2 608 aa17.71■□□□□ 0.43
TSC22D3-201ENST00000315660 DTHD1Q6ZMT9 781 aa17.71■□□□□ 0.43
TSC22D3-201ENST00000315660 CPVLQ9H3G5 476 aa17.71■□□□□ 0.43
TSC22D3-201ENST00000315660 SUGT1Q9Y2Z0 365 aa17.71■□□□□ 0.43
TSC22D3-201ENST00000315660 SYNRGQ9UMZ2 1314 aa17.71■□□□□ 0.43
TSC22D3-201ENST00000315660 MYH1P12882 1939 aa17.71■□□□□ 0.43
TSC22D3-201ENST00000315660 PPP1R3GB7ZBB8 358 aa17.71■□□□□ 0.43
TSC22D3-201ENST00000315660 NOVP48745 357 aa17.71■□□□□ 0.43
TSC22D3-201ENST00000315660 MTRQ99707 1265 aa17.71■□□□□ 0.43
TSC22D3-201ENST00000315660 BRWD3Q6RI45 1802 aa17.7■□□□□ 0.42
TSC22D3-201ENST00000315660 LAD1O00515 517 aa17.7■□□□□ 0.42
TSC22D3-201ENST00000315660 GTPBP6O43824 516 aaPredicted RBP17.7■□□□□ 0.42
TSC22D3-201ENST00000315660 INF2Q27J81 1249 aa17.7■□□□□ 0.42
TSC22D3-201ENST00000315660 USP17L2Q6R6M4 530 aa17.7■□□□□ 0.42
TSC22D3-201ENST00000315660 SMYD4Q8IYR2 804 aaPredicted RBP17.7■□□□□ 0.42
TSC22D3-201ENST00000315660 RRP36Q96EU6 259 aaKnown RBP17.7■□□□□ 0.42
TSC22D3-201ENST00000315660 BLZF1Q9H2G9 400 aa17.7■□□□□ 0.42
TSC22D3-201ENST00000315660 RMND1Q9NWS8 449 aa17.7■□□□□ 0.42
TSC22D3-201ENST00000315660 SEC63Q9UGP8 760 aaKnown RBP17.7■□□□□ 0.42
TSC22D3-201ENST00000315660 ZNF215Q9UL58 517 aaPredicted RBP17.7■□□□□ 0.42
TSC22D3-201ENST00000315660 SMARCA1P28370 1054 aa17.7■□□□□ 0.42
TSC22D3-201ENST00000315660 NAPAP54920 295 aa17.7■□□□□ 0.42
TSC22D3-201ENST00000315660 STX17P56962 302 aa17.7■□□□□ 0.42
TSC22D3-201ENST00000315660 GOLGA8FQ08AF8 430 aa17.7■□□□□ 0.42
TSC22D3-201ENST00000315660 GOLGA8DPQ0D2H9 430 aa17.7■□□□□ 0.42
TSC22D3-201ENST00000315660 ZNF397Q8NF99 534 aaPredicted RBP17.7■□□□□ 0.42
TSC22D3-201ENST00000315660 CTAGE1Q96RT6 745 aa17.7■□□□□ 0.42
TSC22D3-201ENST00000315660 ZMYND12Q9H0C1 365 aa17.7■□□□□ 0.42
TSC22D3-201ENST00000315660 ANKRD31Q8N7Z5 1873 aa17.69■□□□□ 0.42
TSC22D3-201ENST00000315660 SRGNP10124 158 aa17.69■□□□□ 0.42
TSC22D3-201ENST00000315660 GNA11P29992 359 aa17.69■□□□□ 0.42
TSC22D3-201ENST00000315660 STAT6P42226 847 aa17.69■□□□□ 0.42
TSC22D3-201ENST00000315660 GABPB1Q06547 395 aaPredicted RBP17.69■□□□□ 0.42
TSC22D3-201ENST00000315660 PICALMQ13492 652 aa17.69■□□□□ 0.42
TSC22D3-201ENST00000315660 NR1I3Q14994 352 aa17.69■□□□□ 0.42
TSC22D3-201ENST00000315660 FCHSD1Q86WN1 690 aa17.69■□□□□ 0.42
TSC22D3-201ENST00000315660 RASSF8Q8NHQ8 419 aa17.69■□□□□ 0.42
TSC22D3-201ENST00000315660 ERO1AQ96HE7 468 aa17.69■□□□□ 0.42
TSC22D3-201ENST00000315660 ZC3H12CQ9C0D7 883 aaKnown RBP17.69■□□□□ 0.42
TSC22D3-201ENST00000315660 TMEM60Q9H2L4 133 aa17.69■□□□□ 0.42
TSC22D3-201ENST00000315660 A0A1B0GTH6 734 aa17.68■□□□□ 0.42
TSC22D3-201ENST00000315660 ARHGAP6O43182 974 aa17.68■□□□□ 0.42
TSC22D3-201ENST00000315660 CDC25AP30304 524 aa17.68■□□□□ 0.42
TSC22D3-201ENST00000315660 SOGA3Q5TF21 947 aa17.68■□□□□ 0.42
TSC22D3-201ENST00000315660 CERS5Q8N5B7 392 aa17.68■□□□□ 0.42
TSC22D3-201ENST00000315660 C6orf50Q9HD87 102 aa17.68■□□□□ 0.42
TSC22D3-201ENST00000315660 FOCADQ5VW36 1801 aa17.68■□□□□ 0.42
TSC22D3-201ENST00000315660 F8W031 263 aaPredicted RBP17.68■□□□□ 0.42
TSC22D3-201ENST00000315660 GABPAQ06546 454 aa17.68■□□□□ 0.42
TSC22D3-201ENST00000315660 KARSQ15046 597 aaKnown RBP17.68■□□□□ 0.42
TSC22D3-201ENST00000315660 CDKAL1Q5VV42 579 aa17.68■□□□□ 0.42
TSC22D3-201ENST00000315660 APTXQ7Z2E3 356 aaKnown RBP17.68■□□□□ 0.42
TSC22D3-201ENST00000315660 KRT25Q7Z3Z0 450 aa17.68■□□□□ 0.42
TSC22D3-201ENST00000315660 HOMER1Q86YM7 354 aa17.68■□□□□ 0.42
TSC22D3-201ENST00000315660 NLGN1Q8N2Q7 840 aa17.68■□□□□ 0.42
TSC22D3-201ENST00000315660 TMX4Q9H1E5 349 aaPredicted RBP17.68■□□□□ 0.42
TSC22D3-201ENST00000315660 DISC1Q9NRI5 854 aa17.68■□□□□ 0.42
TSC22D3-201ENST00000315660 PLIN4Q96Q06 1357 aa17.67■□□□□ 0.42
TSC22D3-201ENST00000315660 USP17L5A8MUK1 530 aa17.67■□□□□ 0.42
TSC22D3-201ENST00000315660 ZSCAN12O43309 604 aa17.67■□□□□ 0.42
TSC22D3-201ENST00000315660 NPR1P16066 1061 aa17.67■□□□□ 0.42
TSC22D3-201ENST00000315660 UBA7P41226 1012 aa17.67■□□□□ 0.42
TSC22D3-201ENST00000315660 FILIP1LQ4L180 1135 aa17.67■□□□□ 0.42
TSC22D3-201ENST00000315660 TMEM139Q8IV31 216 aa17.67■□□□□ 0.42
TSC22D3-201ENST00000315660 PRPHP41219 470 aa17.67■□□□□ 0.42
TSC22D3-201ENST00000315660 BAG1Q99933 345 aaPredicted RBP17.67■□□□□ 0.42
TSC22D3-201ENST00000315660 DDX4Q9NQI0 724 aaKnown RBP17.67■□□□□ 0.42
TSC22D3-201ENST00000315660 SMCO2A6NFE2 343 aa17.66■□□□□ 0.42
TSC22D3-201ENST00000315660 STX10O60499 249 aa17.66■□□□□ 0.42
TSC22D3-201ENST00000315660 NONOQ15233 471 aaKnown RBP eCLIP17.66■□□□□ 0.42
TSC22D3-201ENST00000315660 KMT5BQ4FZB7 885 aa17.66■□□□□ 0.42
TSC22D3-201ENST00000315660 RRAGBQ5VZM2 374 aa17.66■□□□□ 0.42
TSC22D3-201ENST00000315660 COL23A1Q86Y22 540 aaPredicted RBP17.66■□□□□ 0.42
TSC22D3-201ENST00000315660 PIGSQ96S52 555 aa17.66■□□□□ 0.42
TSC22D3-201ENST00000315660 VAT1LQ9HCJ6 419 aa17.66■□□□□ 0.42
TSC22D3-201ENST00000315660 MTMR4Q9NYA4 1195 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms