RNA–Protein interactions for RNA: ENST00000311371.9

SOX30-202, Transcript of SRY-box 30, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX30, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30-202ENST00000311371 ITGB3BPQ13352 177 aaPredicted RBP18.04■□□□□ 0.48
SOX30-202ENST00000311371 SPATA4Q8NEY3 305 aa18.04■□□□□ 0.48
SOX30-202ENST00000311371 ALG1Q9BT22 464 aa18.04■□□□□ 0.48
SOX30-202ENST00000311371 NFU1Q9UMS0 254 aa18.04■□□□□ 0.48
SOX30-202ENST00000311371 ESYT3A0FGR9 886 aa18.03■□□□□ 0.48
SOX30-202ENST00000311371 RCCD1A6NED2 376 aa18.03■□□□□ 0.48
SOX30-202ENST00000311371 KRT86O43790 486 aa18.03■□□□□ 0.48
SOX30-202ENST00000311371 RTN3O95197 1032 aaPredicted RBP18.03■□□□□ 0.48
SOX30-202ENST00000311371 LINGO3P0C6S8 592 aa18.03■□□□□ 0.48
SOX30-202ENST00000311371 TMOD1P28289 359 aa18.03■□□□□ 0.48
SOX30-202ENST00000311371 CXCR5P32302 372 aa18.03■□□□□ 0.48
SOX30-202ENST00000311371 AFMP43652 599 aa18.03■□□□□ 0.48
SOX30-202ENST00000311371 LAMB3Q13751 1172 aa18.03■□□□□ 0.48
SOX30-202ENST00000311371 NT5DC1Q5TFE4 455 aa18.03■□□□□ 0.48
SOX30-202ENST00000311371 CREG2Q8IUH2 290 aa18.03■□□□□ 0.48
SOX30-202ENST00000311371 IQCKQ8N0W5 287 aa18.03■□□□□ 0.48
SOX30-202ENST00000311371 CAVIN3Q969G5 261 aa18.03■□□□□ 0.48
SOX30-202ENST00000311371 PCDHGC5Q9Y5F6 944 aa18.03■□□□□ 0.48
SOX30-202ENST00000311371 RANBP1P43487 201 aa18.03■□□□□ 0.48
SOX30-202ENST00000311371 KRT31Q15323 416 aa18.03■□□□□ 0.48
SOX30-202ENST00000311371 CDKAL1Q5VV42 579 aa18.03■□□□□ 0.48
SOX30-202ENST00000311371 C1orf167Q5SNV9 1468 aa18.03■□□□□ 0.48
SOX30-202ENST00000311371 GNAT3A8MTJ3 354 aa18.02■□□□□ 0.48
SOX30-202ENST00000311371 PAPOLAP51003 745 aaKnown RBP18.02■□□□□ 0.48
SOX30-202ENST00000311371 VAV2P52735 878 aa18.02■□□□□ 0.48
SOX30-202ENST00000311371 HAND2P61296 217 aa18.02■□□□□ 0.48
SOX30-202ENST00000311371 KRT40Q6A162 431 aa18.02■□□□□ 0.48
SOX30-202ENST00000311371 SUCLG2Q96I99 432 aa18.02■□□□□ 0.48
SOX30-202ENST00000311371 HPS5Q9UPZ3 1129 aa18.02■□□□□ 0.48
SOX30-202ENST00000311371 ITIH6Q6UXX5 1313 aa18.02■□□□□ 0.48
SOX30-202ENST00000311371 KDRP35968 1356 aa18.02■□□□□ 0.48
SOX30-202ENST00000311371 MST1RQ04912 1400 aa18.02■□□□□ 0.48
SOX30-202ENST00000311371 NCAPD2Q15021 1401 aa18.02■□□□□ 0.48
SOX30-202ENST00000311371 LAMA4Q16363 1823 aa18.02■□□□□ 0.48
SOX30-202ENST00000311371 DNAJC8O75937 253 aaPredicted RBP18.02■□□□□ 0.48
SOX30-202ENST00000311371 HAUS3Q68CZ6 603 aa18.02■□□□□ 0.48
SOX30-202ENST00000311371 PPP4R3AQ6IN85 833 aa18.02■□□□□ 0.48
SOX30-202ENST00000311371 TBC1D1Q86TI0 1168 aaPredicted RBP18.02■□□□□ 0.48
SOX30-202ENST00000311371 TRIML1Q8N9V2 468 aa18.02■□□□□ 0.48
SOX30-202ENST00000311371 SMCR8Q8TEV9 937 aaPredicted RBP18.02■□□□□ 0.48
SOX30-202ENST00000311371 AHCYL1O43865 530 aa18.01■□□□□ 0.47
SOX30-202ENST00000311371 FESP07332 822 aa18.01■□□□□ 0.47
SOX30-202ENST00000311371 GNAT1P11488 350 aa18.01■□□□□ 0.47
SOX30-202ENST00000311371 CARSP49589 748 aaKnown RBP18.01■□□□□ 0.47
SOX30-202ENST00000311371 BYSLQ13895 437 aaKnown RBP18.01■□□□□ 0.47
SOX30-202ENST00000311371 IL17REQ8NFR9 667 aa18.01■□□□□ 0.47
SOX30-202ENST00000311371 AGAP11Q8TF27 550 aa18.01■□□□□ 0.47
SOX30-202ENST00000311371 PAPOLBQ9NRJ5 636 aaKnown RBP18.01■□□□□ 0.47
SOX30-202ENST00000311371 DBNLQ9UJU6 430 aaKnown RBP18.01■□□□□ 0.47
SOX30-202ENST00000311371 MAP3K2Q9Y2U5 619 aa18.01■□□□□ 0.47
SOX30-202ENST00000311371 USP4Q13107 963 aa18.01■□□□□ 0.47
SOX30-202ENST00000311371 LACTB2Q53H82 288 aaPredicted RBP18.01■□□□□ 0.47
SOX30-202ENST00000311371 CWF19L1Q69YN2 538 aaKnown RBP18.01■□□□□ 0.47
SOX30-202ENST00000311371 C8orf74Q6P047 294 aa18.01■□□□□ 0.47
SOX30-202ENST00000311371 EZH1Q92800 747 aaPredicted RBP18.01■□□□□ 0.47
SOX30-202ENST00000311371 TSC22D3Q99576 134 aa18.01■□□□□ 0.47
SOX30-202ENST00000311371 DCCP43146 1447 aa18.01■□□□□ 0.47
SOX30-202ENST00000311371 ZSCAN5CA6NGD5 496 aaPredicted RBP18■□□□□ 0.47
SOX30-202ENST00000311371 PHF20L1A8MW92 1017 aa18■□□□□ 0.47
SOX30-202ENST00000311371 CCDC63Q8NA47 563 aa18■□□□□ 0.47
SOX30-202ENST00000311371 PIK3R5Q8WYR1 880 aa18■□□□□ 0.47
SOX30-202ENST00000311371 NOP53Q9NZM5 478 aaKnown RBP18■□□□□ 0.47
SOX30-202ENST00000311371 CTNND2Q9UQB3 1225 aa18■□□□□ 0.47
SOX30-202ENST00000311371 HMGB1P1B2RPK0 211 aaPredicted RBP18■□□□□ 0.47
SOX30-202ENST00000311371 SMIM24O75264 130 aa18■□□□□ 0.47
SOX30-202ENST00000311371 RXRAP19793 462 aa18■□□□□ 0.47
SOX30-202ENST00000311371 GLE1Q53GS7 698 aaKnown RBP18■□□□□ 0.47
SOX30-202ENST00000311371 CPLX4Q7Z7G2 160 aa18■□□□□ 0.47
SOX30-202ENST00000311371 CCT6BQ92526 530 aa18■□□□□ 0.47
SOX30-202ENST00000311371 OSBPL9Q96SU4 736 aa18■□□□□ 0.47
SOX30-202ENST00000311371 PANK4Q9NVE7 773 aa18■□□□□ 0.47
SOX30-202ENST00000311371 LMCD1Q9NZU5 365 aa18■□□□□ 0.47
SOX30-202ENST00000311371 TTC26A0AVF1 554 aa18■□□□□ 0.47
SOX30-202ENST00000311371 TRAPPC3O43617 180 aa18■□□□□ 0.47
SOX30-202ENST00000311371 CYP27A1Q02318 531 aa18■□□□□ 0.47
SOX30-202ENST00000311371 UBXN1Q04323 297 aa18■□□□□ 0.47
SOX30-202ENST00000311371 TSR1Q2NL82 804 aaKnown RBP18■□□□□ 0.47
SOX30-202ENST00000311371 USP49Q70CQ1 688 aa18■□□□□ 0.47
SOX30-202ENST00000311371 B4GALNT2Q8NHY0 566 aa18■□□□□ 0.47
SOX30-202ENST00000311371 EIF4ENIF1Q9NRA8 985 aaKnown RBP18■□□□□ 0.47
SOX30-202ENST00000311371 SNX12Q9UMY4 172 aa18■□□□□ 0.47
SOX30-202ENST00000311371 N4BP2Q86UW6 1770 aaPredicted RBP17.99■□□□□ 0.47
SOX30-202ENST00000311371 CUL4BQ13620 913 aa17.99■□□□□ 0.47
SOX30-202ENST00000311371 ODF2Q5BJF6 829 aa17.99■□□□□ 0.47
SOX30-202ENST00000311371 EMC10Q5UCC4 262 aa17.99■□□□□ 0.47
SOX30-202ENST00000311371 GKAP1Q5VSY0 366 aaPredicted RBP17.99■□□□□ 0.47
SOX30-202ENST00000311371 PHKBQ93100 1093 aa17.99■□□□□ 0.47
SOX30-202ENST00000311371 PIK3C2AO00443 1686 aa17.99■□□□□ 0.47
SOX30-202ENST00000311371 GOLGA6L10A6NI86 522 aa17.99■□□□□ 0.47
SOX30-202ENST00000311371 PRC1O43663 620 aa17.99■□□□□ 0.47
SOX30-202ENST00000311371 HSPD1P10809 573 aaKnown RBP17.99■□□□□ 0.47
SOX30-202ENST00000311371 CTCFP49711 727 aaPredicted RBP17.99■□□□□ 0.47
SOX30-202ENST00000311371 COPB1P53618 953 aaKnown RBP17.99■□□□□ 0.47
SOX30-202ENST00000311371 KRT83P78385 493 aa17.99■□□□□ 0.47
SOX30-202ENST00000311371 NFRKBQ6P4R8 1299 aa17.99■□□□□ 0.47
SOX30-202ENST00000311371 CRELD2Q6UXH1 353 aaPredicted RBP17.99■□□□□ 0.47
SOX30-202ENST00000311371 CADPS2Q86UW7 1296 aa17.99■□□□□ 0.47
SOX30-202ENST00000311371 PLAAQ9Y263 795 aa17.99■□□□□ 0.47
SOX30-202ENST00000311371 OVOS2A0A0G2JMS6 1433 aa17.98■□□□□ 0.47
SOX30-202ENST00000311371 OVOS2A0A0J9YW53 1432 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms