RNA–Protein interactions for RNA: ENST00000308488.10

RSF1-201, Transcript of remodeling and spacing factor 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RSF1, Length 11,550 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1-201ENST00000308488 DUX4L3P0CJ86 424 aa8.59□□□□□ -1.03
RSF1-201ENST00000308488 DUX4L4P0CJ87 422 aa8.59□□□□□ -1.03
RSF1-201ENST00000308488 DUX4L5P0CJ88 424 aa8.59□□□□□ -1.03
RSF1-201ENST00000308488 DUX4L6P0CJ89 424 aa8.59□□□□□ -1.03
RSF1-201ENST00000308488 DUX4L7P0CJ90 424 aa8.59□□□□□ -1.03
RSF1-201ENST00000308488 CTNNA2P26232 953 aa8.59□□□□□ -1.03
RSF1-201ENST00000308488 DUX4Q9UBX2 424 aa8.59□□□□□ -1.03
RSF1-201ENST00000308488 SPG7Q9UQ90 795 aa8.59□□□□□ -1.03
RSF1-201ENST00000308488 KRT14P02533 472 aa8.59□□□□□ -1.03
RSF1-201ENST00000308488 SERPINB8P50452 374 aa8.59□□□□□ -1.03
RSF1-201ENST00000308488 ZNF280DQ6N043 979 aa8.59□□□□□ -1.03
RSF1-201ENST00000308488 BZW1Q7L1Q6 419 aaKnown RBP8.59□□□□□ -1.03
RSF1-201ENST00000308488 MCF2L2Q86YR7 1114 aa8.59□□□□□ -1.03
RSF1-201ENST00000308488 VPS37BQ9H9H4 285 aa8.59□□□□□ -1.03
RSF1-201ENST00000308488 SLC52A1Q9NWF4 448 aa8.59□□□□□ -1.03
RSF1-201ENST00000308488 TMA7Q9Y2S6 64 aaKnown RBP8.59□□□□□ -1.03
RSF1-201ENST00000308488 GUCY2DQ02846 1103 aa8.59□□□□□ -1.03
RSF1-201ENST00000308488 ZKSCAN4Q969J2 545 aaPredicted RBP8.59□□□□□ -1.03
RSF1-201ENST00000308488 CSRNP2Q9H175 543 aa8.59□□□□□ -1.03
RSF1-201ENST00000308488 ZMYND8Q9ULU4 1186 aaPredicted RBP8.59□□□□□ -1.03
RSF1-201ENST00000308488 BZW2Q9Y6E2 419 aaKnown RBP8.59□□□□□ -1.03
RSF1-201ENST00000308488 DEAF1O75398 565 aaPredicted RBP8.59□□□□□ -1.04
RSF1-201ENST00000308488 CAPN1P07384 714 aa8.59□□□□□ -1.04
RSF1-201ENST00000308488 PALM2Q8IXS6 379 aa8.59□□□□□ -1.04
RSF1-201ENST00000308488 MAGEC3Q8TD91 643 aa8.59□□□□□ -1.04
RSF1-201ENST00000308488 RAPGEF4Q8WZA2 1011 aa8.59□□□□□ -1.04
RSF1-201ENST00000308488 CHMP6Q96FZ7 201 aa8.59□□□□□ -1.04
RSF1-201ENST00000308488 EFHD1Q9BUP0 239 aa8.59□□□□□ -1.04
RSF1-201ENST00000308488 SLC4A7Q9Y6M7 1214 aa8.59□□□□□ -1.04
RSF1-201ENST00000308488 STRNO43815 780 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 EIF2B2P49770 351 aaKnown RBP8.58□□□□□ -1.04
RSF1-201ENST00000308488 OR8K1Q8NGG5 319 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 SBNO1A3KN83 1393 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 AP2B1P63010 937 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 VSTM4Q8IW00 320 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 GOLGA8CPA6NN73 597 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 TBC1D8O95759 1140 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 CCT2P78371 535 aaKnown RBP8.58□□□□□ -1.04
RSF1-201ENST00000308488 RAB34Q9BZG1 259 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 UHRF1BP1LA0JNW5 1464 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 SERPINB1P30740 379 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 CYFIP2Q96F07 1278 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 DDX28Q9NUL7 540 aaKnown RBP8.58□□□□□ -1.04
RSF1-201ENST00000308488 A0A087WZG4 1122 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 KRT6AP02538 564 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 KRT6BP04259 564 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 MCF2P10911 925 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 KRT76Q01546 638 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 ITGB3BPQ13352 177 aaPredicted RBP8.58□□□□□ -1.04
RSF1-201ENST00000308488 EHD2Q9NZN4 543 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 LCMT1Q9UIC8 334 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 KCNH3Q9ULD8 1083 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 CTNND2Q9UQB3 1225 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 ANGPTL3Q9Y5C1 460 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 POLR1AO95602 1720 aaPredicted RBP8.58□□□□□ -1.04
RSF1-201ENST00000308488 IKBKBO14920 756 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 GOLGA8FQ08AF8 430 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 GOLGA8DPQ0D2H9 430 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 GRAMD1BQ3KR37 738 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 THOC7Q6I9Y2 204 aaKnown RBP8.58□□□□□ -1.04
RSF1-201ENST00000308488 TERB1Q8NA31 727 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 OMA1Q96E52 524 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 ZBTB40Q9NUA8 1239 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 ZNF229Q9UJW7 825 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 HPCAL4Q9UM19 191 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 MTMR6Q9Y217 621 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 DDHD1Q8NEL9 900 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 ECHDC1Q9NTX5 307 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 KIAA1468Q9P260 1216 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 LSP1P33241 339 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 MKRN3Q13064 507 aaKnown RBP8.58□□□□□ -1.04
RSF1-201ENST00000308488 ZHX3Q9H4I2 956 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 SAP30BPQ9UHR5 308 aaKnown RBP8.58□□□□□ -1.04
RSF1-201ENST00000308488 A0A1W2PQ27 194 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 A0A1W2PQ64 194 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 A0A1W2PQD8 194 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 ZNF202O95125 648 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 DCTN2Q13561 401 aaKnown RBP8.58□□□□□ -1.04
RSF1-201ENST00000308488 SIX5Q8N196 739 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 SPC25Q9HBM1 224 aa8.58□□□□□ -1.04
RSF1-201ENST00000308488 FBXO9Q9UK97 447 aaPredicted RBP8.58□□□□□ -1.04
RSF1-201ENST00000308488 GAS8O95995 478 aa8.57□□□□□ -1.04
RSF1-201ENST00000308488 TEFQ10587 303 aa8.57□□□□□ -1.04
RSF1-201ENST00000308488 NYAP1Q6ZVC0 841 aa8.57□□□□□ -1.04
RSF1-201ENST00000308488 PABPN1Q86U42 306 aaKnown RBP eCLIP8.57□□□□□ -1.04
RSF1-201ENST00000308488 DRAXINQ8NBI3 349 aaPredicted RBP8.57□□□□□ -1.04
RSF1-201ENST00000308488 SKA1Q96BD8 255 aa8.57□□□□□ -1.04
RSF1-201ENST00000308488 KCNF1Q9H3M0 494 aa8.57□□□□□ -1.04
RSF1-201ENST00000308488 H0Y3Z8 333 aa8.57□□□□□ -1.04
RSF1-201ENST00000308488 SLC4A2P04920 1241 aa8.57□□□□□ -1.04
RSF1-201ENST00000308488 SLC35F6Q8N357 371 aa8.57□□□□□ -1.04
RSF1-201ENST00000308488 TRIML2Q8N7C3 387 aa8.57□□□□□ -1.04
RSF1-201ENST00000308488 PLAAQ9Y263 795 aa8.57□□□□□ -1.04
RSF1-201ENST00000308488 LCA5LO95447 670 aa8.57□□□□□ -1.04
RSF1-201ENST00000308488 KRT6CP48668 564 aa8.57□□□□□ -1.04
RSF1-201ENST00000308488 USP14P54578 494 aa8.57□□□□□ -1.04
RSF1-201ENST00000308488 HDAC4P56524 1084 aa8.57□□□□□ -1.04
RSF1-201ENST00000308488 ANO1Q5XXA6 986 aa8.57□□□□□ -1.04
RSF1-201ENST00000308488 TTLL11Q8NHH1 800 aa8.57□□□□□ -1.04
RSF1-201ENST00000308488 RWDD3Q9Y3V2 267 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms