RNA–Protein interactions for RNA: ENST00000307767.12

TVP23B-201, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23B, Length 2,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-201ENST00000307767 FAM177A1Q8N128 213 aaPredicted RBP18.77■□□□□ 0.6
TVP23B-201ENST00000307767 CCDC148Q8NFR7 591 aa18.77■□□□□ 0.6
TVP23B-201ENST00000307767 PIGSQ96S52 555 aa18.77■□□□□ 0.6
TVP23B-201ENST00000307767 UBA5Q9GZZ9 404 aa18.77■□□□□ 0.6
TVP23B-201ENST00000307767 DBNDD1Q9H9R9 158 aa18.77■□□□□ 0.6
TVP23B-201ENST00000307767 NFE2L3Q9Y4A8 694 aa18.77■□□□□ 0.6
TVP23B-201ENST00000307767 PPP1R3GB7ZBB8 358 aa18.77■□□□□ 0.59
TVP23B-201ENST00000307767 APTXQ7Z2E3 356 aaKnown RBP18.77■□□□□ 0.59
TVP23B-201ENST00000307767 VSTM4Q8IW00 320 aa18.77■□□□□ 0.59
TVP23B-201ENST00000307767 SAMSN1Q9NSI8 373 aaKnown RBP18.77■□□□□ 0.59
TVP23B-201ENST00000307767 EDIL3O43854 480 aa18.76■□□□□ 0.59
TVP23B-201ENST00000307767 ERCC5P28715 1186 aaPredicted RBP18.76■□□□□ 0.59
TVP23B-201ENST00000307767 GTF2F1P35269 517 aaKnown RBP eCLIP18.76■□□□□ 0.59
TVP23B-201ENST00000307767 LONP1P36776 959 aaKnown RBP18.76■□□□□ 0.59
TVP23B-201ENST00000307767 NAALADL2Q58DX5 795 aa18.76■□□□□ 0.59
TVP23B-201ENST00000307767 HSP90AA4PQ58FG1 418 aa18.76■□□□□ 0.59
TVP23B-201ENST00000307767 LRRC15Q8TF66 581 aa18.76■□□□□ 0.59
TVP23B-201ENST00000307767 GSDMAQ96QA5 445 aa18.76■□□□□ 0.59
TVP23B-201ENST00000307767 CCDC194A0A1B0GVG4 234 aa18.75■□□□□ 0.59
TVP23B-201ENST00000307767 PODNQ7Z5L7 613 aa18.75■□□□□ 0.59
TVP23B-201ENST00000307767 C2CD5Q86YS7 1000 aa18.75■□□□□ 0.59
TVP23B-201ENST00000307767 ZNF622Q969S3 477 aaKnown RBP eCLIP18.75■□□□□ 0.59
TVP23B-201ENST00000307767 DNAJC18Q9H819 358 aa18.75■□□□□ 0.59
TVP23B-201ENST00000307767 SERPINB13Q9UIV8 391 aa18.75■□□□□ 0.59
TVP23B-201ENST00000307767 NYAP1Q6ZVC0 841 aa18.75■□□□□ 0.59
TVP23B-201ENST00000307767 HOMER1Q86YM7 354 aa18.75■□□□□ 0.59
TVP23B-201ENST00000307767 SMYD4Q8IYR2 804 aaPredicted RBP18.75■□□□□ 0.59
TVP23B-201ENST00000307767 LRRC47Q8N1G4 583 aaKnown RBP18.75■□□□□ 0.59
TVP23B-201ENST00000307767 IQUBQ8NA54 791 aa18.75■□□□□ 0.59
TVP23B-201ENST00000307767 C7orf43Q8WVR3 580 aa18.75■□□□□ 0.59
TVP23B-201ENST00000307767 C16orf45Q96MC5 204 aaPredicted RBP18.75■□□□□ 0.59
TVP23B-201ENST00000307767 FRMPD2Q68DX3 1309 aaPredicted RBP18.74■□□□□ 0.59
TVP23B-201ENST00000307767 ZNF646O15015 1829 aaPredicted RBP18.74■□□□□ 0.59
TVP23B-201ENST00000307767 SMCO2A6NFE2 343 aa18.74■□□□□ 0.59
TVP23B-201ENST00000307767 PP2D1A8MPX8 630 aa18.74■□□□□ 0.59
TVP23B-201ENST00000307767 SERPINC1P01008 464 aa18.74■□□□□ 0.59
TVP23B-201ENST00000307767 CRKP46108 304 aa18.74■□□□□ 0.59
TVP23B-201ENST00000307767 DACT2Q5SW24 774 aa18.74■□□□□ 0.59
TVP23B-201ENST00000307767 E4F1Q66K89 784 aaPredicted RBP18.74■□□□□ 0.59
TVP23B-201ENST00000307767 TEKT1Q969V4 418 aa18.74■□□□□ 0.59
TVP23B-201ENST00000307767 BLZF1Q9H2G9 400 aa18.74■□□□□ 0.59
TVP23B-201ENST00000307767 TMX1Q9H3N1 280 aa18.74■□□□□ 0.59
TVP23B-201ENST00000307767 VAT1LQ9HCJ6 419 aa18.74■□□□□ 0.59
TVP23B-201ENST00000307767 MYO3BQ8WXR4 1341 aa18.74■□□□□ 0.59
TVP23B-201ENST00000307767 C10orf71Q711Q0 1435 aa18.74■□□□□ 0.59
TVP23B-201ENST00000307767 NAPAP54920 295 aa18.73■□□□□ 0.59
TVP23B-201ENST00000307767 EIF6P56537 245 aaKnown RBP18.73■□□□□ 0.59
TVP23B-201ENST00000307767 TBX2Q13207 712 aaPredicted RBP18.73■□□□□ 0.59
TVP23B-201ENST00000307767 CT47A1Q5JQC4 288 aaPredicted RBP18.73■□□□□ 0.59
TVP23B-201ENST00000307767 STYK1Q6J9G0 422 aa18.73■□□□□ 0.59
TVP23B-201ENST00000307767 CCAR2Q8N163 923 aaKnown RBP18.73■□□□□ 0.59
TVP23B-201ENST00000307767 CCDC150Q8NCX0 1101 aa18.73■□□□□ 0.59
TVP23B-201ENST00000307767 RRP36Q96EU6 259 aaKnown RBP18.73■□□□□ 0.59
TVP23B-201ENST00000307767 ZDHHC15Q96MV8 337 aa18.73■□□□□ 0.59
TVP23B-201ENST00000307767 DACH1Q9UI36 760 aa18.73■□□□□ 0.59
TVP23B-201ENST00000307767 SCN9AQ15858 1988 aa18.73■□□□□ 0.59
TVP23B-201ENST00000307767 TNS1Q9HBL0 1735 aaKnown RBP18.73■□□□□ 0.59
TVP23B-201ENST00000307767 SLX4Q8IY92 1834 aa18.73■□□□□ 0.59
TVP23B-201ENST00000307767 CHRNA5P30532 468 aa18.73■□□□□ 0.59
TVP23B-201ENST00000307767 KARSQ15046 597 aaKnown RBP18.73■□□□□ 0.59
TVP23B-201ENST00000307767 CFAP100Q494V2 611 aa18.73■□□□□ 0.59
TVP23B-201ENST00000307767 TSC1Q92574 1164 aa18.73■□□□□ 0.59
TVP23B-201ENST00000307767 MRIQ9BWK5 157 aa18.73■□□□□ 0.59
TVP23B-201ENST00000307767 SWAP70Q9UH65 585 aa18.73■□□□□ 0.59
TVP23B-201ENST00000307767 ESYT2A0FGR8 921 aa18.72■□□□□ 0.59
TVP23B-201ENST00000307767 DYNC1I1O14576 645 aa18.72■□□□□ 0.59
TVP23B-201ENST00000307767 CBFA2T2O43439 604 aa18.72■□□□□ 0.59
TVP23B-201ENST00000307767 SH3BP5LQ7L8J4 393 aa18.72■□□□□ 0.59
TVP23B-201ENST00000307767 GREB1LQ9C091 1923 aaPredicted RBP18.72■□□□□ 0.59
TVP23B-201ENST00000307767 RIOK3O14730 519 aaKnown RBP18.72■□□□□ 0.59
TVP23B-201ENST00000307767 GTPBP6O43824 516 aaPredicted RBP18.72■□□□□ 0.59
TVP23B-201ENST00000307767 TNNT1P13805 278 aa18.72■□□□□ 0.59
TVP23B-201ENST00000307767 CACNB3P54284 484 aa18.72■□□□□ 0.59
TVP23B-201ENST00000307767 SHROOM1Q2M3G4 852 aaPredicted RBP18.72■□□□□ 0.59
TVP23B-201ENST00000307767 STRIP1Q5VSL9 837 aa18.72■□□□□ 0.59
TVP23B-201ENST00000307767 CDKAL1Q5VV42 579 aa18.72■□□□□ 0.59
TVP23B-201ENST00000307767 FAM198AQ9UFP1 575 aa18.72■□□□□ 0.59
TVP23B-201ENST00000307767 SIPA1L1O43166 1804 aa18.71■□□□□ 0.59
TVP23B-201ENST00000307767 PPP1R11O60927 126 aaPredicted RBP18.71■□□□□ 0.59
TVP23B-201ENST00000307767 PRPHP41219 470 aa18.71■□□□□ 0.59
TVP23B-201ENST00000307767 FKBP1AP62942 108 aaKnown RBP18.71■□□□□ 0.59
TVP23B-201ENST00000307767 GOLGA8FQ08AF8 430 aa18.71■□□□□ 0.59
TVP23B-201ENST00000307767 GOLGA8DPQ0D2H9 430 aa18.71■□□□□ 0.59
TVP23B-201ENST00000307767 NR1I3Q14994 352 aa18.71■□□□□ 0.59
TVP23B-201ENST00000307767 DTHD1Q6ZMT9 781 aa18.71■□□□□ 0.59
TVP23B-201ENST00000307767 KRT25Q7Z3Z0 450 aa18.71■□□□□ 0.59
TVP23B-201ENST00000307767 TMEM139Q8IV31 216 aa18.71■□□□□ 0.59
TVP23B-201ENST00000307767 KIAA0825Q8IV33 1275 aa18.71■□□□□ 0.59
TVP23B-201ENST00000307767 EHD4Q9H223 541 aa18.71■□□□□ 0.59
TVP23B-201ENST00000307767 TMEM260Q9NX78 707 aa18.71■□□□□ 0.59
TVP23B-201ENST00000307767 TTLL1O95922 423 aa18.7■□□□□ 0.58
TVP23B-201ENST00000307767 SFPQP23246 707 aaKnown RBP eCLIP18.7■□□□□ 0.58
TVP23B-201ENST00000307767 KCNJ6P48051 423 aa18.7■□□□□ 0.58
TVP23B-201ENST00000307767 STX17P56962 302 aa18.7■□□□□ 0.58
TVP23B-201ENST00000307767 ZNF543Q08ER8 600 aa18.7■□□□□ 0.58
TVP23B-201ENST00000307767 TPD52L1Q16890 204 aaPredicted RBP18.7■□□□□ 0.58
TVP23B-201ENST00000307767 ASPRV1Q53RT3 343 aa18.7■□□□□ 0.58
TVP23B-201ENST00000307767 SPATA1Q5VX52 437 aa18.7■□□□□ 0.58
TVP23B-201ENST00000307767 TTBK2Q6IQ55 1244 aa18.7■□□□□ 0.58
TVP23B-201ENST00000307767 CCSER1Q9C0I3 900 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms