RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 ITGB8P26012 769 aa19.13■□□□□ 0.65
TMEM41A-201ENST00000296254 SMAD3P84022 425 aaKnown RBP19.13■□□□□ 0.65
TMEM41A-201ENST00000296254 SNRNP48Q6IEG0 339 aaKnown RBP19.13■□□□□ 0.65
TMEM41A-201ENST00000296254 KBTBD3Q8NAB2 608 aa19.13■□□□□ 0.65
TMEM41A-201ENST00000296254 APPBP2Q92624 585 aa19.13■□□□□ 0.65
TMEM41A-201ENST00000296254 TACC3Q9Y6A5 838 aa19.13■□□□□ 0.65
TMEM41A-201ENST00000296254 SYNGAP1Q96PV0 1343 aa19.13■□□□□ 0.65
TMEM41A-201ENST00000296254 SYNRGQ9UMZ2 1314 aa19.12■□□□□ 0.65
TMEM41A-201ENST00000296254 F5H6K3 240 aa19.12■□□□□ 0.65
TMEM41A-201ENST00000296254 PQBP1O60828 265 aaKnown RBP19.12■□□□□ 0.65
TMEM41A-201ENST00000296254 KLRC3Q07444 240 aa19.12■□□□□ 0.65
TMEM41A-201ENST00000296254 C20orf194Q5TEA3 1177 aa19.12■□□□□ 0.65
TMEM41A-201ENST00000296254 OSBP2Q969R2 916 aa19.12■□□□□ 0.65
TMEM41A-201ENST00000296254 MKNK2Q9HBH9 465 aa19.12■□□□□ 0.65
TMEM41A-201ENST00000296254 EPB41L4AQ9HCS5 686 aaPredicted RBP19.12■□□□□ 0.65
TMEM41A-201ENST00000296254 DNAJC25-GNG10A0A024R161 153 aa19.11■□□□□ 0.65
TMEM41A-201ENST00000296254 IGKV6D-41A0A0C4DH26 115 aa19.11■□□□□ 0.65
TMEM41A-201ENST00000296254 ATP2A1O14983 1001 aa19.11■□□□□ 0.65
TMEM41A-201ENST00000296254 KIAA0355O15063 1070 aa19.11■□□□□ 0.65
TMEM41A-201ENST00000296254 MAMDC4Q6UXC1 1216 aa19.11■□□□□ 0.65
TMEM41A-201ENST00000296254 STK11IPQ8N1F8 1099 aa19.11■□□□□ 0.65
TMEM41A-201ENST00000296254 CDX2Q99626 313 aaPredicted RBP19.11■□□□□ 0.65
TMEM41A-201ENST00000296254 RIPK3Q9Y572 518 aa19.11■□□□□ 0.65
TMEM41A-201ENST00000296254 MINDY4BA8MYZ0 360 aa19.1■□□□□ 0.65
TMEM41A-201ENST00000296254 GPAA1O43292 621 aa19.1■□□□□ 0.65
TMEM41A-201ENST00000296254 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.1■□□□□ 0.65
TMEM41A-201ENST00000296254 PRPF38AQ8NAV1 312 aaKnown RBP19.1■□□□□ 0.65
TMEM41A-201ENST00000296254 GPATCH3Q96I76 525 aa19.1■□□□□ 0.65
TMEM41A-201ENST00000296254 TSEN34Q9BSV6 310 aaKnown RBP19.1■□□□□ 0.65
TMEM41A-201ENST00000296254 COL25A1Q9BXS0 654 aaPredicted RBP19.1■□□□□ 0.65
TMEM41A-201ENST00000296254 TTYH1Q9H313 450 aaPredicted RBP19.1■□□□□ 0.65
TMEM41A-201ENST00000296254 SEMA6BQ9H3T3 888 aa19.1■□□□□ 0.65
TMEM41A-201ENST00000296254 PLIN4Q96Q06 1357 aa19.09■□□□□ 0.65
TMEM41A-201ENST00000296254 MOXD2PA6NHM9 499 aa19.09■□□□□ 0.65
TMEM41A-201ENST00000296254 SNAI1O95863 264 aaPredicted RBP19.09■□□□□ 0.65
TMEM41A-201ENST00000296254 RAG1P15918 1043 aa19.09■□□□□ 0.65
TMEM41A-201ENST00000296254 ACLYP53396 1101 aa19.09■□□□□ 0.65
TMEM41A-201ENST00000296254 EPHB4P54760 987 aa19.09■□□□□ 0.65
TMEM41A-201ENST00000296254 TSHZ3Q63HK5 1081 aa19.09■□□□□ 0.65
TMEM41A-201ENST00000296254 ANKRD33Q7Z3H0 272 aa19.09■□□□□ 0.65
TMEM41A-201ENST00000296254 ZNF467Q7Z7K2 595 aaPredicted RBP19.09■□□□□ 0.65
TMEM41A-201ENST00000296254 KLHDC9Q8NEP7 349 aa19.09■□□□□ 0.65
TMEM41A-201ENST00000296254 DDX11Q96FC9 970 aa19.09■□□□□ 0.65
TMEM41A-201ENST00000296254 CEP95Q96GE4 821 aa19.09■□□□□ 0.65
TMEM41A-201ENST00000296254 RNPC3Q96LT9 517 aaKnown RBP19.09■□□□□ 0.65
TMEM41A-201ENST00000296254 SLC38A10Q9HBR0 1119 aa19.09■□□□□ 0.65
TMEM41A-201ENST00000296254 STARD7Q9NQZ5 370 aa19.09■□□□□ 0.65
TMEM41A-201ENST00000296254 ZHX1Q9UKY1 873 aaPredicted RBP19.09■□□□□ 0.65
TMEM41A-201ENST00000296254 FAM184BQ9ULE4 1060 aa19.09■□□□□ 0.65
TMEM41A-201ENST00000296254 SYNPO2Q9UMS6 1093 aa19.09■□□□□ 0.65
TMEM41A-201ENST00000296254 MUC3AQ02505 3323 aa19.09■□□□□ 0.65
TMEM41A-201ENST00000296254 MYH4Q9Y623 1939 aa19.08■□□□□ 0.65
TMEM41A-201ENST00000296254 RNF113AO15541 343 aaKnown RBP19.08■□□□□ 0.64
TMEM41A-201ENST00000296254 ZFYP08048 801 aaPredicted RBP19.08■□□□□ 0.64
TMEM41A-201ENST00000296254 GNAT2P19087 354 aa19.08■□□□□ 0.64
TMEM41A-201ENST00000296254 TDO2P48775 406 aa19.08■□□□□ 0.64
TMEM41A-201ENST00000296254 CCSAPQ6IQ19 270 aaPredicted RBP19.08■□□□□ 0.64
TMEM41A-201ENST00000296254 CPXCR1Q8N123 301 aa19.08■□□□□ 0.64
TMEM41A-201ENST00000296254 NUP133Q8WUM0 1156 aa19.08■□□□□ 0.64
TMEM41A-201ENST00000296254 TOX2Q96NM4 488 aa19.08■□□□□ 0.64
TMEM41A-201ENST00000296254 ZNF287Q9HBT7 754 aa19.08■□□□□ 0.64
TMEM41A-201ENST00000296254 CLIP2Q9UDT6 1046 aa19.08■□□□□ 0.64
TMEM41A-201ENST00000296254 TMEM265A0A087WTH1 108 aa19.07■□□□□ 0.64
TMEM41A-201ENST00000296254 MYADML2A6NDP7 307 aa19.07■□□□□ 0.64
TMEM41A-201ENST00000296254 M0R2C6 588 aa19.07■□□□□ 0.64
TMEM41A-201ENST00000296254 ZBED4O75132 1171 aa19.07■□□□□ 0.64
TMEM41A-201ENST00000296254 DUSP11O75319 330 aaKnown RBP19.07■□□□□ 0.64
TMEM41A-201ENST00000296254 PRDM1O75626 825 aa19.07■□□□□ 0.64
TMEM41A-201ENST00000296254 CST5P28325 142 aaPredicted RBP19.07■□□□□ 0.64
TMEM41A-201ENST00000296254 FPGSQ05932 587 aa19.07■□□□□ 0.64
TMEM41A-201ENST00000296254 FAAP100Q0VG06 881 aa19.07■□□□□ 0.64
TMEM41A-201ENST00000296254 LRRC47Q8N1G4 583 aaKnown RBP19.07■□□□□ 0.64
TMEM41A-201ENST00000296254 GMCL1P1Q8NEA9 526 aa19.07■□□□□ 0.64
TMEM41A-201ENST00000296254 MAFAQ8NHW3 353 aaPredicted RBP19.07■□□□□ 0.64
TMEM41A-201ENST00000296254 MKL1Q969V6 931 aa19.07■□□□□ 0.64
TMEM41A-201ENST00000296254 KIFC2Q96AC6 838 aa19.07■□□□□ 0.64
TMEM41A-201ENST00000296254 FGD4Q96M96 766 aa19.07■□□□□ 0.64
TMEM41A-201ENST00000296254 TMEM39AQ9NV64 488 aa19.07■□□□□ 0.64
TMEM41A-201ENST00000296254 MTMR4Q9NYA4 1195 aa19.07■□□□□ 0.64
TMEM41A-201ENST00000296254 ADCY6O43306 1168 aa19.06■□□□□ 0.64
TMEM41A-201ENST00000296254 TTLL1O95922 423 aa19.06■□□□□ 0.64
TMEM41A-201ENST00000296254 OAZ1P54368 228 aa19.06■□□□□ 0.64
TMEM41A-201ENST00000296254 KCNA10Q16322 511 aa19.06■□□□□ 0.64
TMEM41A-201ENST00000296254 MYLIPQ8WY64 445 aa19.06■□□□□ 0.64
TMEM41A-201ENST00000296254 DCTPP1Q9H773 170 aa19.06■□□□□ 0.64
TMEM41A-201ENST00000296254 RAVER2Q9HCJ3 691 aaKnown RBP19.06■□□□□ 0.64
TMEM41A-201ENST00000296254 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.06■□□□□ 0.64
TMEM41A-201ENST00000296254 FBXO40Q9UH90 709 aa19.06■□□□□ 0.64
TMEM41A-201ENST00000296254 FEM1BQ9UK73 627 aa19.06■□□□□ 0.64
TMEM41A-201ENST00000296254 TBX21Q9UL17 535 aa19.06■□□□□ 0.64
TMEM41A-201ENST00000296254 CTDP1Q9Y5B0 961 aaPredicted RBP19.06■□□□□ 0.64
TMEM41A-201ENST00000296254 DCDC2CA8MYV0 355 aa19.05■□□□□ 0.64
TMEM41A-201ENST00000296254 SLC4A3P48751 1232 aa19.05■□□□□ 0.64
TMEM41A-201ENST00000296254 ACVR2BQ13705 512 aa19.05■□□□□ 0.64
TMEM41A-201ENST00000296254 ZNF444Q8N0Y2 327 aaPredicted RBP19.05■□□□□ 0.64
TMEM41A-201ENST00000296254 ANKRD35Q8N283 1001 aa19.05■□□□□ 0.64
TMEM41A-201ENST00000296254 CHST13Q8NET6 341 aa19.05■□□□□ 0.64
TMEM41A-201ENST00000296254 ELP1O95163 1332 aa19.04■□□□□ 0.64
TMEM41A-201ENST00000296254 MROH7Q68CQ1 1323 aa19.04■□□□□ 0.64
TMEM41A-201ENST00000296254 APPP05067 770 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms