RNA–Protein interactions for RNA: ENST00000296181.8

ITGB5-201, Transcript of integrin subunit beta 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGB5, Length 4,372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-201ENST00000296181 MCAMP43121 646 aa20.46■□□□□ 0.87
ITGB5-201ENST00000296181 RASSF7Q02833 373 aa20.46■□□□□ 0.87
ITGB5-201ENST00000296181 MYO1AQ9UBC5 1043 aa20.46■□□□□ 0.87
ITGB5-201ENST00000296181 NEXMIFQ5QGS0 1516 aa20.45■□□□□ 0.87
ITGB5-201ENST00000296181 METTL16Q86W50 562 aaKnown RBP20.45■□□□□ 0.86
ITGB5-201ENST00000296181 GSPT2Q8IYD1 628 aaKnown RBP20.45■□□□□ 0.86
ITGB5-201ENST00000296181 SYNE4Q8N205 404 aa20.45■□□□□ 0.86
ITGB5-201ENST00000296181 OXER1Q8TDS5 423 aa20.45■□□□□ 0.86
ITGB5-201ENST00000296181 RNF26Q9BY78 433 aaPredicted RBP20.45■□□□□ 0.86
ITGB5-201ENST00000296181 A6NNZ2 444 aa20.45■□□□□ 0.86
ITGB5-201ENST00000296181 H7C1W4 665 aa20.45■□□□□ 0.86
ITGB5-201ENST00000296181 TRIM66O15016 1216 aa20.45■□□□□ 0.86
ITGB5-201ENST00000296181 EHHADHQ08426 723 aa20.45■□□□□ 0.86
ITGB5-201ENST00000296181 TUBB8Q3ZCM7 444 aa20.45■□□□□ 0.86
ITGB5-201ENST00000296181 MB21D2Q8IYB1 491 aaPredicted RBP20.45■□□□□ 0.86
ITGB5-201ENST00000296181 LCORLQ8N3X6 602 aa20.45■□□□□ 0.86
ITGB5-201ENST00000296181 CNOT6LQ96LI5 555 aaKnown RBP20.45■□□□□ 0.86
ITGB5-201ENST00000296181 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.45■□□□□ 0.862e-6■■■■■ 149.1
ITGB5-201ENST00000296181 RUFY4Q6ZNE9 571 aa20.45■□□□□ 0.86
ITGB5-201ENST00000296181 BIN2Q9UBW5 565 aaPredicted RBP20.45■□□□□ 0.86
ITGB5-201ENST00000296181 BAIAP2L1Q9UHR4 511 aa20.45■□□□□ 0.86
ITGB5-201ENST00000296181 POTEJP0CG39 1038 aa20.44■□□□□ 0.86
ITGB5-201ENST00000296181 SCARF1Q14162 830 aa20.44■□□□□ 0.86
ITGB5-201ENST00000296181 MRFAP1Q9Y605 127 aa20.44■□□□□ 0.86
ITGB5-201ENST00000296181 USPL1Q5W0Q7 1092 aa20.44■□□□□ 0.86
ITGB5-201ENST00000296181 ADGRB1O14514 1584 aa20.44■□□□□ 0.86
ITGB5-201ENST00000296181 KIDINS220Q9ULH0 1771 aa20.44■□□□□ 0.86
ITGB5-201ENST00000296181 CTNNA2P26232 953 aa20.44■□□□□ 0.86
ITGB5-201ENST00000296181 CTNNA1P35221 906 aaKnown RBP20.44■□□□□ 0.86
ITGB5-201ENST00000296181 STXBP4Q6ZWJ1 553 aa20.44■□□□□ 0.86
ITGB5-201ENST00000296181 ENGASEQ8NFI3 743 aa20.44■□□□□ 0.86
ITGB5-201ENST00000296181 C8orf37Q96NL8 207 aa20.44■□□□□ 0.86
ITGB5-201ENST00000296181 ZNF609O15014 1411 aa20.44■□□□□ 0.86
ITGB5-201ENST00000296181 PEX26Q7Z412 305 aa20.44■□□□□ 0.86
ITGB5-201ENST00000296181 PNMA1Q8ND90 353 aa20.44■□□□□ 0.86
ITGB5-201ENST00000296181 MTRF1LQ9UGC7 380 aaKnown RBP20.44■□□□□ 0.86
ITGB5-201ENST00000296181 REREQ9P2R6 1566 aa20.43■□□□□ 0.86
ITGB5-201ENST00000296181 ERVV-2B6SEH9 535 aa20.43■□□□□ 0.86
ITGB5-201ENST00000296181 FDPSP14324 419 aaKnown RBP20.43■□□□□ 0.86
ITGB5-201ENST00000296181 LIFRP42702 1097 aa20.43■□□□□ 0.86
ITGB5-201ENST00000296181 HS2ST1Q7LGA3 356 aa20.43■□□□□ 0.86
ITGB5-201ENST00000296181 HDAC6Q9UBN7 1215 aa20.43■□□□□ 0.86
ITGB5-201ENST00000296181 PPP1R1BQ9UD71 204 aaPredicted RBP20.43■□□□□ 0.86
ITGB5-201ENST00000296181 SMCO2A6NFE2 343 aa20.43■□□□□ 0.86
ITGB5-201ENST00000296181 ST3GAL1Q11201 340 aa20.43■□□□□ 0.86
ITGB5-201ENST00000296181 ADAT2Q7Z6V5 191 aaKnown RBP20.43■□□□□ 0.86
ITGB5-201ENST00000296181 FBF1Q8TES7 1133 aa20.43■□□□□ 0.86
ITGB5-201ENST00000296181 SOS2Q07890 1332 aaPredicted RBP20.43■□□□□ 0.86
ITGB5-201ENST00000296181 CALCRLQ16602 461 aa20.43■□□□□ 0.86
ITGB5-201ENST00000296181 MAPKAPK5Q8IW41 473 aa20.43■□□□□ 0.86
ITGB5-201ENST00000296181 MYO3AQ8NEV4 1616 aa20.43■□□□□ 0.86
ITGB5-201ENST00000296181 GOLGA8KD6RF30 607 aa20.42■□□□□ 0.86
ITGB5-201ENST00000296181 KRT25Q7Z3Z0 450 aa20.42■□□□□ 0.86
ITGB5-201ENST00000296181 HOOK3Q86VS8 718 aa20.42■□□□□ 0.86
ITGB5-201ENST00000296181 HLA-DOAP06340 250 aa20.42■□□□□ 0.86
ITGB5-201ENST00000296181 TEX11Q8IYF3 940 aa20.42■□□□□ 0.86
ITGB5-201ENST00000296181 POLR2FP61218 127 aaKnown RBP20.42■□□□□ 0.86
ITGB5-201ENST00000296181 IFT88Q13099 833 aa20.42■□□□□ 0.86
ITGB5-201ENST00000296181 UHMK1Q8TAS1 419 aaKnown RBP20.42■□□□□ 0.86
ITGB5-201ENST00000296181 STRBPQ96SI9 672 aaKnown RBP20.42■□□□□ 0.86
ITGB5-201ENST00000296181 KRT12Q99456 494 aa20.42■□□□□ 0.86
ITGB5-201ENST00000296181 EPB41L5Q9HCM4 733 aa20.42■□□□□ 0.86
ITGB5-201ENST00000296181 UTP11Q9Y3A2 253 aaKnown RBP20.42■□□□□ 0.86
ITGB5-201ENST00000296181 FAM13AO94988 1023 aa20.41■□□□□ 0.86
ITGB5-201ENST00000296181 VSNL1P62760 191 aa20.41■□□□□ 0.86
ITGB5-201ENST00000296181 FMR1Q06787 632 aaKnown RBP eCLIP20.41■□□□□ 0.86
ITGB5-201ENST00000296181 REXO1Q8N1G1 1221 aaKnown RBP20.41■□□□□ 0.86
ITGB5-201ENST00000296181 LSM14BQ9BX40 385 aaKnown RBP20.41■□□□□ 0.86
ITGB5-201ENST00000296181 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.41■□□□□ 0.86
ITGB5-201ENST00000296181 DYNLL1P63167 89 aaKnown RBP20.41■□□□□ 0.86
ITGB5-201ENST00000296181 TNIP1Q15025 636 aa20.41■□□□□ 0.86
ITGB5-201ENST00000296181 PPP1R7Q15435 360 aa20.41■□□□□ 0.86
ITGB5-201ENST00000296181 DPH5Q9H2P9 285 aa20.41■□□□□ 0.86
ITGB5-201ENST00000296181 SEC31BQ9NQW1 1179 aa20.41■□□□□ 0.86
ITGB5-201ENST00000296181 EIF3CLB5ME19 914 aaKnown RBP20.41■□□□□ 0.86
ITGB5-201ENST00000296181 CALCOCO2Q13137 446 aa20.41■□□□□ 0.86
ITGB5-201ENST00000296181 EIF3CQ99613 913 aaKnown RBP20.41■□□□□ 0.86
ITGB5-201ENST00000296181 PLVAPQ9BX97 442 aa20.41■□□□□ 0.86
ITGB5-201ENST00000296181 TRIM49BA6NDI0 452 aa20.41■□□□□ 0.86
ITGB5-201ENST00000296181 MRPL44Q9H9J2 332 aaKnown RBP20.41■□□□□ 0.86
ITGB5-201ENST00000296181 PPFIA4O75335 1185 aa20.4■□□□□ 0.86
ITGB5-201ENST00000296181 MOCS3O95396 460 aa20.4■□□□□ 0.86
ITGB5-201ENST00000296181 PARP3Q9Y6F1 533 aa20.4■□□□□ 0.86
ITGB5-201ENST00000296181 NEDD4P46934 1319 aa20.4■□□□□ 0.86
ITGB5-201ENST00000296181 PRPHP41219 470 aa20.4■□□□□ 0.86
ITGB5-201ENST00000296181 CUL4BQ13620 913 aa20.4■□□□□ 0.86
ITGB5-201ENST00000296181 CCDC6Q16204 474 aa20.4■□□□□ 0.86
ITGB5-201ENST00000296181 ZNF658Q5TYW1 1059 aaPredicted RBP20.4■□□□□ 0.86
ITGB5-201ENST00000296181 NAA35Q5VZE5 725 aa20.4■□□□□ 0.86
ITGB5-201ENST00000296181 USP49Q70CQ1 688 aa20.4■□□□□ 0.86
ITGB5-201ENST00000296181 SUGCTQ9HAC7 445 aa20.4■□□□□ 0.86
ITGB5-201ENST00000296181 ZBTB1Q9Y2K1 713 aa20.4■□□□□ 0.86
ITGB5-201ENST00000296181 SPDYE3A6NKU9 549 aa20.4■□□□□ 0.86
ITGB5-201ENST00000296181 MRPL12P52815 198 aaKnown RBP20.4■□□□□ 0.86
ITGB5-201ENST00000296181 CLNS1AP54105 237 aaKnown RBP20.4■□□□□ 0.86
ITGB5-201ENST00000296181 TGFBRAP1Q8WUH2 860 aa20.4■□□□□ 0.86
ITGB5-201ENST00000296181 ABHD10Q9NUJ1 306 aa20.4■□□□□ 0.86
ITGB5-201ENST00000296181 A0A087WUV0 522 aaPredicted RBP20.39■□□□□ 0.86
ITGB5-201ENST00000296181 PLEKHA8P1O95397 391 aa20.39■□□□□ 0.86
ITGB5-201ENST00000296181 RPL13P26373 211 aaKnown RBP20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms