RNA–Protein interactions for RNA: ENST00000291525.11

TFF3-201, Transcript of trefoil factor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TFF3, Length 407 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-201ENST00000291525 MSL3Q8N5Y2 521 aaKnown RBP20.62■□□□□ 0.89
TFF3-201ENST00000291525 KIFC2Q96AC6 838 aa20.62■□□□□ 0.89
TFF3-201ENST00000291525 EVI5LQ96CN4 794 aa20.62■□□□□ 0.89
TFF3-201ENST00000291525 DDX11Q96FC9 970 aa20.62■□□□□ 0.89
TFF3-201ENST00000291525 CNPY2Q9Y2B0 182 aa20.62■□□□□ 0.89
TFF3-201ENST00000291525 SALL3Q9BXA9 1300 aa20.61■□□□□ 0.89
TFF3-201ENST00000291525 SOX1O00570 391 aaPredicted RBP20.61■□□□□ 0.89
TFF3-201ENST00000291525 FDX1P10109 184 aa20.61■□□□□ 0.89
TFF3-201ENST00000291525 TFAP4Q01664 338 aa20.61■□□□□ 0.89
TFF3-201ENST00000291525 HDAC1Q13547 482 aaPredicted RBP20.61■□□□□ 0.89
TFF3-201ENST00000291525 AAMPQ13685 434 aa20.61■□□□□ 0.89
TFF3-201ENST00000291525 GPR153Q6NV75 609 aa20.61■□□□□ 0.89
TFF3-201ENST00000291525 LRRC47Q8N1G4 583 aaKnown RBP20.61■□□□□ 0.89
TFF3-201ENST00000291525 FBXO40Q9UH90 709 aa20.61■□□□□ 0.89
TFF3-201ENST00000291525 ISY1Q9ULR0 285 aaKnown RBP20.61■□□□□ 0.89
TFF3-201ENST00000291525 SMCHD1A6NHR9 2005 aa20.6■□□□□ 0.89
TFF3-201ENST00000291525 BMP3P12645 472 aa20.6■□□□□ 0.89
TFF3-201ENST00000291525 AKR1A1P14550 325 aa20.6■□□□□ 0.89
TFF3-201ENST00000291525 OAZ1P54368 228 aa20.6■□□□□ 0.89
TFF3-201ENST00000291525 MDM2Q00987 491 aaPredicted RBP20.6■□□□□ 0.89
TFF3-201ENST00000291525 LRRC41Q15345 812 aa20.6■□□□□ 0.89
TFF3-201ENST00000291525 LRIT3Q3SXY7 679 aa20.6■□□□□ 0.89
TFF3-201ENST00000291525 FAM47AQ5JRC9 791 aa20.6■□□□□ 0.89
TFF3-201ENST00000291525 SLFN13Q68D06 897 aa20.6■□□□□ 0.89
TFF3-201ENST00000291525 RNF180Q86T96 592 aa20.6■□□□□ 0.89
TFF3-201ENST00000291525 CPXCR1Q8N123 301 aa20.6■□□□□ 0.89
TFF3-201ENST00000291525 LRCH3Q96II8 777 aa20.6■□□□□ 0.89
TFF3-201ENST00000291525 SLC38A10Q9HBR0 1119 aa20.6■□□□□ 0.89
TFF3-201ENST00000291525 XPNPEP3Q9NQH7 507 aa20.6■□□□□ 0.89
TFF3-201ENST00000291525 ATP11BQ9Y2G3 1177 aa20.6■□□□□ 0.89
TFF3-201ENST00000291525 TSPY2A6NKD2 308 aa20.59■□□□□ 0.89
TFF3-201ENST00000291525 SLC4A3P48751 1232 aa20.59■□□□□ 0.89
TFF3-201ENST00000291525 SLC39A5Q6ZMH5 540 aa20.59■□□□□ 0.89
TFF3-201ENST00000291525 TICAM2Q86XR7 235 aa20.59■□□□□ 0.89
TFF3-201ENST00000291525 CHST13Q8NET6 341 aa20.59■□□□□ 0.89
TFF3-201ENST00000291525 SYNGAP1Q96PV0 1343 aa20.58■□□□□ 0.89
TFF3-201ENST00000291525 STAT2P52630 851 aa20.58■□□□□ 0.89
TFF3-201ENST00000291525 PDE1AP54750 535 aa20.58■□□□□ 0.89
TFF3-201ENST00000291525 IKQ13123 557 aaPredicted RBP20.58■□□□□ 0.89
TFF3-201ENST00000291525 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.58■□□□□ 0.89
TFF3-201ENST00000291525 FAM160B2Q86V87 743 aa20.58■□□□□ 0.89
TFF3-201ENST00000291525 CHURC1Q8WUH1 139 aa20.58■□□□□ 0.89
TFF3-201ENST00000291525 RAVER2Q9HCJ3 691 aaKnown RBP20.58■□□□□ 0.89
TFF3-201ENST00000291525 HELLSQ9NRZ9 838 aa20.58■□□□□ 0.89
TFF3-201ENST00000291525 ADCYAP1R1P41586 468 aa20.57■□□□□ 0.88
TFF3-201ENST00000291525 SNX17Q15036 470 aa20.57■□□□□ 0.88
TFF3-201ENST00000291525 CCDC129Q6ZRS4 1044 aa20.57■□□□□ 0.88
TFF3-201ENST00000291525 ZNF467Q7Z7K2 595 aaPredicted RBP20.57■□□□□ 0.88
TFF3-201ENST00000291525 ANKRD35Q8N283 1001 aa20.57■□□□□ 0.88
TFF3-201ENST00000291525 GMCL1Q96IK5 515 aa20.57■□□□□ 0.88
TFF3-201ENST00000291525 RIPK3Q9Y572 518 aa20.57■□□□□ 0.88
TFF3-201ENST00000291525 DNAJC25-GNG10A0A024R161 153 aa20.56■□□□□ 0.88
TFF3-201ENST00000291525 TMEM232C9JQI7 657 aa20.56■□□□□ 0.88
TFF3-201ENST00000291525 ZNF865P0CJ78 1059 aaPredicted RBP20.56■□□□□ 0.88
TFF3-201ENST00000291525 SLC1A4P43007 532 aa20.56■□□□□ 0.88
TFF3-201ENST00000291525 C1orf53Q5VUE5 145 aa20.56■□□□□ 0.88
TFF3-201ENST00000291525 MAMDC4Q6UXC1 1216 aa20.56■□□□□ 0.88
TFF3-201ENST00000291525 STX8Q9UNK0 236 aa20.56■□□□□ 0.88
TFF3-201ENST00000291525 PHF24Q9UPV7 400 aa20.56■□□□□ 0.88
TFF3-201ENST00000291525 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.56■□□□□ 0.88
TFF3-201ENST00000291525 LTBP2Q14767 1821 aa20.55■□□□□ 0.88
TFF3-201ENST00000291525 SZT2Q5T011 3432 aa20.55■□□□□ 0.88
TFF3-201ENST00000291525 CTDSPL2Q05D32 466 aa20.55■□□□□ 0.88
TFF3-201ENST00000291525 ALX1Q15699 326 aa20.55■□□□□ 0.88
TFF3-201ENST00000291525 TRIM60Q495X7 471 aa20.55■□□□□ 0.88
TFF3-201ENST00000291525 STAG1Q8WVM7 1258 aa20.55■□□□□ 0.88
TFF3-201ENST00000291525 FERMT2Q96AC1 680 aa20.55■□□□□ 0.88
TFF3-201ENST00000291525 PRDM5Q9NQX1 630 aaPredicted RBP20.55■□□□□ 0.88
TFF3-201ENST00000291525 ANAPC4Q9UJX5 808 aa20.55■□□□□ 0.88
TFF3-201ENST00000291525 FAM184BQ9ULE4 1060 aa20.55■□□□□ 0.88
TFF3-201ENST00000291525 RANBP6O60518 1105 aaKnown RBP20.54■□□□□ 0.88
TFF3-201ENST00000291525 PGK1P00558 417 aa20.54■□□□□ 0.88
TFF3-201ENST00000291525 TAL1P17542 331 aaPredicted RBP20.54■□□□□ 0.88
TFF3-201ENST00000291525 TKFCQ3LXA3 575 aa20.54■□□□□ 0.88
TFF3-201ENST00000291525 MCMDC2Q4G0Z9 681 aa20.54■□□□□ 0.88
TFF3-201ENST00000291525 ACAD9Q9H845 621 aa20.54■□□□□ 0.88
TFF3-201ENST00000291525 ZHX1Q9UKY1 873 aaPredicted RBP20.54■□□□□ 0.88
TFF3-201ENST00000291525 FOXP2O15409 715 aa20.53■□□□□ 0.88
TFF3-201ENST00000291525 ORC4O43929 436 aa20.53■□□□□ 0.88
TFF3-201ENST00000291525 PLA2G6O60733 806 aa20.53■□□□□ 0.88
TFF3-201ENST00000291525 TSEN34Q9BSV6 310 aaKnown RBP20.53■□□□□ 0.88
TFF3-201ENST00000291525 RWDD1Q9H446 243 aaPredicted RBP20.53■□□□□ 0.88
TFF3-201ENST00000291525 MCM3APO60318 1980 aa20.52■□□□□ 0.88
TFF3-201ENST00000291525 MCCP23508 829 aa20.52■□□□□ 0.88
TFF3-201ENST00000291525 VPS53Q5VIR6 699 aa20.52■□□□□ 0.88
TFF3-201ENST00000291525 RCSD1Q6JBY9 416 aa20.52■□□□□ 0.88
TFF3-201ENST00000291525 DEFB123Q8N688 67 aa20.52■□□□□ 0.88
TFF3-201ENST00000291525 ABHD16BQ9H3Z7 469 aa20.52■□□□□ 0.88
TFF3-201ENST00000291525 TOMM22Q9NS69 142 aa20.52■□□□□ 0.88
TFF3-201ENST00000291525 HOMER2Q9NSB8 354 aa20.52■□□□□ 0.88
TFF3-201ENST00000291525 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.52■□□□□ 0.88
TFF3-201ENST00000291525 DNAH12Q6ZR08 3092 aa20.52■□□□□ 0.87
TFF3-201ENST00000291525 MOXD2PA6NHM9 499 aa20.51■□□□□ 0.87
TFF3-201ENST00000291525 TRIM6-TRIM34B2RNG4 842 aa20.51■□□□□ 0.87
TFF3-201ENST00000291525 SNAI1O95863 264 aaPredicted RBP20.51■□□□□ 0.87
TFF3-201ENST00000291525 MFAP1P55081 439 aaKnown RBP20.51■□□□□ 0.87
TFF3-201ENST00000291525 ACVR2BQ13705 512 aa20.51■□□□□ 0.87
TFF3-201ENST00000291525 NUP133Q8WUM0 1156 aa20.51■□□□□ 0.87
TFF3-201ENST00000291525 LNPKQ9C0E8 428 aa20.51■□□□□ 0.87
TFF3-201ENST00000291525 SPC25Q9HBM1 224 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms