RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 ADAMTS3O15072 1205 aa13.34□□□□□ -0.27
SLC13A3-201ENST00000279027 TNNT3P45378 269 aaPredicted RBP13.34□□□□□ -0.27
SLC13A3-201ENST00000279027 CACNB1Q02641 598 aaPredicted RBP13.34□□□□□ -0.27
SLC13A3-201ENST00000279027 PPP2R3AQ06190 1150 aa13.34□□□□□ -0.27
SLC13A3-201ENST00000279027 PRR5LQ6MZQ0 368 aa13.34□□□□□ -0.27
SLC13A3-201ENST00000279027 FBXO38Q6PIJ6 1188 aa13.34□□□□□ -0.27
SLC13A3-201ENST00000279027 TBCKQ8TEA7 893 aa13.34□□□□□ -0.27
SLC13A3-201ENST00000279027 POLD4Q9HCU8 107 aa13.34□□□□□ -0.27
SLC13A3-201ENST00000279027 LRWD1Q9UFC0 647 aa13.34□□□□□ -0.27
SLC13A3-201ENST00000279027 SEC31AO94979 1220 aaKnown RBP13.34□□□□□ -0.27
SLC13A3-201ENST00000279027 MCM6Q14566 821 aa13.34□□□□□ -0.27
SLC13A3-201ENST00000279027 USH1GQ495M9 461 aa13.34□□□□□ -0.27
SLC13A3-201ENST00000279027 TDRD12Q587J7 1177 aaKnown RBP13.34□□□□□ -0.27
SLC13A3-201ENST00000279027 LUC7L2Q9Y383 392 aaKnown RBP13.34□□□□□ -0.27
SLC13A3-201ENST00000279027 GTPBP6O43824 516 aaPredicted RBP13.33□□□□□ -0.28
SLC13A3-201ENST00000279027 LRRC41Q15345 812 aa13.33□□□□□ -0.28
SLC13A3-201ENST00000279027 ZYXQ15942 572 aaKnown RBP13.33□□□□□ -0.28
SLC13A3-201ENST00000279027 FKBP15Q5T1M5 1219 aa13.33□□□□□ -0.28
SLC13A3-201ENST00000279027 GSDMAQ96QA5 445 aa13.33□□□□□ -0.28
SLC13A3-201ENST00000279027 BMP2KQ9NSY1 1161 aaPredicted RBP13.33□□□□□ -0.28
SLC13A3-201ENST00000279027 PSDA5PKW4 1024 aaPredicted RBP13.33□□□□□ -0.28
SLC13A3-201ENST00000279027 PLCG2P16885 1265 aa13.33□□□□□ -0.28
SLC13A3-201ENST00000279027 CACNA2D4Q7Z3S7 1137 aa13.33□□□□□ -0.28
SLC13A3-201ENST00000279027 TRERF1Q96PN7 1200 aa13.33□□□□□ -0.28
SLC13A3-201ENST00000279027 PSMB7Q99436 277 aa13.33□□□□□ -0.28
SLC13A3-201ENST00000279027 FAM205AQ6ZU69 1335 aa13.33□□□□□ -0.28
SLC13A3-201ENST00000279027 MACROD2A1Z1Q3 448 aa13.33□□□□□ -0.28
SLC13A3-201ENST00000279027 KRT31Q15323 416 aa13.33□□□□□ -0.28
SLC13A3-201ENST00000279027 TRIML1Q8N9V2 468 aa13.33□□□□□ -0.28
SLC13A3-201ENST00000279027 SNX29Q8TEQ0 813 aa13.33□□□□□ -0.28
SLC13A3-201ENST00000279027 WDR24Q96S15 920 aa13.33□□□□□ -0.28
SLC13A3-201ENST00000279027 PRCPP42785 496 aa13.32□□□□□ -0.28
SLC13A3-201ENST00000279027 COPB1P53618 953 aaKnown RBP13.32□□□□□ -0.28
SLC13A3-201ENST00000279027 SPAG1Q07617 926 aa13.32□□□□□ -0.28
SLC13A3-201ENST00000279027 CCDC40Q4G0X9 1142 aa13.32□□□□□ -0.28
SLC13A3-201ENST00000279027 NELFCDQ8IXH7 590 aa13.32□□□□□ -0.28
SLC13A3-201ENST00000279027 QTRT2Q9H974 415 aaKnown RBP13.32□□□□□ -0.28
SLC13A3-201ENST00000279027 PLCG1P19174 1290 aa13.32□□□□□ -0.28
SLC13A3-201ENST00000279027 ATP2B4P23634 1241 aa13.32□□□□□ -0.28
SLC13A3-201ENST00000279027 KRT222Q8N1A0 295 aa13.32□□□□□ -0.28
SLC13A3-201ENST00000279027 NOC4LQ9BVI4 516 aaKnown RBP13.32□□□□□ -0.28
SLC13A3-201ENST00000279027 ORC4O43929 436 aa13.32□□□□□ -0.28
SLC13A3-201ENST00000279027 ERCC5P28715 1186 aaPredicted RBP13.32□□□□□ -0.28
SLC13A3-201ENST00000279027 AMPD3Q01432 767 aa13.32□□□□□ -0.28
SLC13A3-201ENST00000279027 CALCRLQ16602 461 aa13.32□□□□□ -0.28
SLC13A3-201ENST00000279027 KRT79Q5XKE5 535 aa13.32□□□□□ -0.28
SLC13A3-201ENST00000279027 BARGINQ6ZT62 677 aa13.32□□□□□ -0.28
SLC13A3-201ENST00000279027 FCHSD1Q86WN1 690 aa13.32□□□□□ -0.28
SLC13A3-201ENST00000279027 CNGA4Q8IV77 575 aa13.32□□□□□ -0.28
SLC13A3-201ENST00000279027 IL17RBQ9NRM6 502 aa13.32□□□□□ -0.28
SLC13A3-201ENST00000279027 FAM207AQ9NSI2 230 aaPredicted RBP13.32□□□□□ -0.28
SLC13A3-201ENST00000279027 B4DLN1 442 aa13.31□□□□□ -0.28
SLC13A3-201ENST00000279027 OR52Z1P0C646 297 aa13.31□□□□□ -0.28
SLC13A3-201ENST00000279027 DGKHQ86XP1 1220 aa13.31□□□□□ -0.28
SLC13A3-201ENST00000279027 ZNF579Q8NAF0 562 aaKnown RBP13.31□□□□□ -0.28
SLC13A3-201ENST00000279027 ZFP91Q96JP5 570 aaPredicted RBP13.31□□□□□ -0.28
SLC13A3-201ENST00000279027 JADE2Q9NQC1 790 aa13.31□□□□□ -0.28
SLC13A3-201ENST00000279027 GOLGA6L9A6NEM1 432 aa13.31□□□□□ -0.28
SLC13A3-201ENST00000279027 ENC1O14682 589 aa13.31□□□□□ -0.28
SLC13A3-201ENST00000279027 ATP2C1P98194 919 aaPredicted RBP13.31□□□□□ -0.28
SLC13A3-201ENST00000279027 KMT5BQ4FZB7 885 aa13.31□□□□□ -0.28
SLC13A3-201ENST00000279027 NEK8Q86SG6 692 aa13.31□□□□□ -0.28
SLC13A3-201ENST00000279027 RAB34Q9BZG1 259 aa13.31□□□□□ -0.28
SLC13A3-201ENST00000279027 ANAPC4Q9UJX5 808 aa13.31□□□□□ -0.28
SLC13A3-201ENST00000279027 PCP11498 1178 aaKnown RBP13.31□□□□□ -0.28
SLC13A3-201ENST00000279027 TCERG1LQ5VWI1 586 aa13.31□□□□□ -0.28
SLC13A3-201ENST00000279027 TYW1BQ6NUM6 668 aa13.31□□□□□ -0.28
SLC13A3-201ENST00000279027 SV2BQ7L1I2 683 aa13.31□□□□□ -0.28
SLC13A3-201ENST00000279027 CCDC102AQ96A19 550 aa13.31□□□□□ -0.28
SLC13A3-201ENST00000279027 GDAP1L1Q96MZ0 367 aa13.31□□□□□ -0.28
SLC13A3-201ENST00000279027 PYM1Q9BRP8 204 aaKnown RBP13.31□□□□□ -0.28
SLC13A3-201ENST00000279027 MYO1BO43795 1136 aa13.3□□□□□ -0.28
SLC13A3-201ENST00000279027 ADCY7P51828 1080 aa13.3□□□□□ -0.28
SLC13A3-201ENST00000279027 TXNRD1Q16881 649 aa13.3□□□□□ -0.28
SLC13A3-201ENST00000279027 KRT25Q7Z3Z0 450 aa13.3□□□□□ -0.28
SLC13A3-201ENST00000279027 SPICE1Q8N0Z3 855 aa13.3□□□□□ -0.28
SLC13A3-201ENST00000279027 CTAGE9A4FU28 777 aa13.3□□□□□ -0.28
SLC13A3-201ENST00000279027 POTEMA6NI47 508 aa13.3□□□□□ -0.28
SLC13A3-201ENST00000279027 AKR1B10O60218 316 aa13.3□□□□□ -0.28
SLC13A3-201ENST00000279027 STX10O60499 249 aa13.3□□□□□ -0.28
SLC13A3-201ENST00000279027 PHACTR2O75167 634 aa13.3□□□□□ -0.28
SLC13A3-201ENST00000279027 SPA17Q15506 151 aa13.3□□□□□ -0.28
SLC13A3-201ENST00000279027 CCDC122Q5T0U0 273 aa13.3□□□□□ -0.28
SLC13A3-201ENST00000279027 TTBK2Q6IQ55 1244 aa13.3□□□□□ -0.28
SLC13A3-201ENST00000279027 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.3□□□□□ -0.283e-7■□□□□ 8.7
SLC13A3-201ENST00000279027 TFR2Q9UP52 801 aa13.3□□□□□ -0.28
SLC13A3-201ENST00000279027 GDF11O95390 407 aa13.3□□□□□ -0.28
SLC13A3-201ENST00000279027 RASA1P20936 1047 aa13.3□□□□□ -0.28
SLC13A3-201ENST00000279027 LONP1P36776 959 aaKnown RBP13.3□□□□□ -0.28
SLC13A3-201ENST00000279027 VPS72Q15906 364 aa13.3□□□□□ -0.28
SLC13A3-201ENST00000279027 NYAP1Q6ZVC0 841 aa13.3□□□□□ -0.28
SLC13A3-201ENST00000279027 PLEKHA4Q9H4M7 779 aa13.3□□□□□ -0.28
SLC13A3-201ENST00000279027 DISC1Q9NRI5 854 aa13.3□□□□□ -0.28
SLC13A3-201ENST00000279027 OGFRQ9NZT2 677 aa13.3□□□□□ -0.28
SLC13A3-201ENST00000279027 PCDHA6Q9UN73 950 aa13.3□□□□□ -0.28
SLC13A3-201ENST00000279027 PCDHA8Q9Y5H6 950 aa13.3□□□□□ -0.28
SLC13A3-201ENST00000279027 AFF2P51816 1311 aa13.3□□□□□ -0.28
SLC13A3-201ENST00000279027 COL18A1P39060 1754 aa13.3□□□□□ -0.28
SLC13A3-201ENST00000279027 AKR1B1P15121 316 aa13.29□□□□□ -0.28
SLC13A3-201ENST00000279027 SLC1A4P43007 532 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms