RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 TMEM39BQ9GZU3 492 aa23.56■■□□□ 1.36
LYSMD2-201ENST00000267838 ZKSCAN5Q9Y2L8 839 aa23.56■■□□□ 1.36
LYSMD2-201ENST00000267838 TRIM75PA6NK02 468 aa23.55■■□□□ 1.36
LYSMD2-201ENST00000267838 ADAMTS3O15072 1205 aa23.55■■□□□ 1.36
LYSMD2-201ENST00000267838 GH2P01242 217 aa23.55■■□□□ 1.36
LYSMD2-201ENST00000267838 NDUFA8P51970 172 aa23.55■■□□□ 1.36
LYSMD2-201ENST00000267838 JAG1P78504 1218 aa23.55■■□□□ 1.36
LYSMD2-201ENST00000267838 CCDC96Q2M329 555 aa23.55■■□□□ 1.36
LYSMD2-201ENST00000267838 CCDC12Q8WUD4 166 aaPredicted RBP23.55■■□□□ 1.36
LYSMD2-201ENST00000267838 DPF2Q92785 391 aa23.55■■□□□ 1.36
LYSMD2-201ENST00000267838 GJA3Q9Y6H8 435 aa23.55■■□□□ 1.36
LYSMD2-201ENST00000267838 PIK3AP1Q6ZUJ8 805 aa23.55■■□□□ 1.36
LYSMD2-201ENST00000267838 CKAP2LQ8IYA6 745 aa23.55■■□□□ 1.36
LYSMD2-201ENST00000267838 KRI1Q8N9T8 703 aaKnown RBP23.55■■□□□ 1.36
LYSMD2-201ENST00000267838 CTAGE5O15320 804 aa23.54■■□□□ 1.36
LYSMD2-201ENST00000267838 TBC1D12O60347 775 aa23.54■■□□□ 1.36
LYSMD2-201ENST00000267838 NAPAP54920 295 aa23.54■■□□□ 1.36
LYSMD2-201ENST00000267838 MICALL2Q8IY33 904 aa23.54■■□□□ 1.36
LYSMD2-201ENST00000267838 DCAF4Q8WV16 495 aa23.54■■□□□ 1.36
LYSMD2-201ENST00000267838 MORC2Q9Y6X9 1032 aaPredicted RBP23.54■■□□□ 1.36
LYSMD2-201ENST00000267838 hCG_1984214I3L0E3 225 aa23.53■■□□□ 1.36
LYSMD2-201ENST00000267838 M0R2N6 131 aa23.53■■□□□ 1.36
LYSMD2-201ENST00000267838 CCDC192P0DO97 292 aa23.53■■□□□ 1.36
LYSMD2-201ENST00000267838 PFKFB1P16118 471 aa23.53■■□□□ 1.36
LYSMD2-201ENST00000267838 TRAPPC10P48553 1259 aa23.53■■□□□ 1.36
LYSMD2-201ENST00000267838 TNNI2P48788 182 aa23.53■■□□□ 1.36
LYSMD2-201ENST00000267838 SLFN13Q68D06 897 aa23.53■■□□□ 1.36
LYSMD2-201ENST00000267838 TTBK2Q6IQ55 1244 aa23.53■■□□□ 1.36
LYSMD2-201ENST00000267838 SHC4Q6S5L8 630 aa23.53■■□□□ 1.36
LYSMD2-201ENST00000267838 CDAN1Q8IWY9 1227 aa23.53■■□□□ 1.36
LYSMD2-201ENST00000267838 ZNF713Q8N859 430 aaPredicted RBP23.53■■□□□ 1.36
LYSMD2-201ENST00000267838 CLIC6Q96NY7 704 aa23.53■■□□□ 1.36
LYSMD2-201ENST00000267838 ZMYND12Q9H0C1 365 aa23.53■■□□□ 1.36
LYSMD2-201ENST00000267838 PGAP2Q9UHJ9 254 aa23.53■■□□□ 1.36
LYSMD2-201ENST00000267838 EGFRP00533 1210 aa23.52■■□□□ 1.36
LYSMD2-201ENST00000267838 PTPREP23469 700 aa23.52■■□□□ 1.36
LYSMD2-201ENST00000267838 TTC38Q5R3I4 469 aa23.52■■□□□ 1.36
LYSMD2-201ENST00000267838 RESP18Q5W5W9 173 aa23.52■■□□□ 1.36
LYSMD2-201ENST00000267838 KCTD1Q719H9 257 aa23.52■■□□□ 1.36
LYSMD2-201ENST00000267838 ADGRF4Q8IZF3 695 aa23.52■■□□□ 1.36
LYSMD2-201ENST00000267838 CNOT7Q9UIV1 285 aaKnown RBP23.52■■□□□ 1.36
LYSMD2-201ENST00000267838 FBXO2Q9UK22 296 aaPredicted RBP23.52■■□□□ 1.36
LYSMD2-201ENST00000267838 ZNF541Q9H0D2 1346 aa23.52■■□□□ 1.36
LYSMD2-201ENST00000267838 RAD21O60216 631 aa23.52■■□□□ 1.36
LYSMD2-201ENST00000267838 BMP15O95972 392 aa23.52■■□□□ 1.36
LYSMD2-201ENST00000267838 RNF214Q8ND24 703 aa23.52■■□□□ 1.36
LYSMD2-201ENST00000267838 GMCL1P1Q8NEA9 526 aa23.52■■□□□ 1.36
LYSMD2-201ENST00000267838 JMJD4Q9H9V9 463 aa23.52■■□□□ 1.36
LYSMD2-201ENST00000267838 PCDHA6Q9UN73 950 aa23.52■■□□□ 1.36
LYSMD2-201ENST00000267838 PCDHA8Q9Y5H6 950 aa23.52■■□□□ 1.36
LYSMD2-201ENST00000267838 FAM237AA0A1B0GTK4 181 aa23.51■■□□□ 1.35
LYSMD2-201ENST00000267838 SLC1A4P43007 532 aa23.51■■□□□ 1.35
LYSMD2-201ENST00000267838 ARHGAP27Q6ZUM4 889 aa23.51■■□□□ 1.35
LYSMD2-201ENST00000267838 FHDC1Q9C0D6 1143 aaPredicted RBP23.51■■□□□ 1.35
LYSMD2-201ENST00000267838 C6orf50Q9HD87 102 aa23.51■■□□□ 1.35
LYSMD2-201ENST00000267838 SMCO2A6NFE2 343 aa23.5■■□□□ 1.35
LYSMD2-201ENST00000267838 WNT7AO00755 349 aa23.5■■□□□ 1.35
LYSMD2-201ENST00000267838 RRP9O43818 475 aaKnown RBP23.5■■□□□ 1.35
LYSMD2-201ENST00000267838 TNFAIP1Q13829 316 aa23.5■■□□□ 1.35
LYSMD2-201ENST00000267838 SAMD7Q7Z3H4 446 aa23.5■■□□□ 1.35
LYSMD2-201ENST00000267838 RASGRP4Q8TDF6 673 aa23.5■■□□□ 1.35
LYSMD2-201ENST00000267838 HPSEQ9Y251 543 aa23.5■■□□□ 1.35
LYSMD2-201ENST00000267838 SRPRBQ9Y5M8 271 aaKnown RBP23.5■■□□□ 1.35
LYSMD2-201ENST00000267838 PNMA6FA0A0J9YX94 578 aa23.5■■□□□ 1.35
LYSMD2-201ENST00000267838 CCDC194A0A1B0GVG4 234 aa23.5■■□□□ 1.35
LYSMD2-201ENST00000267838 F5H6K3 240 aa23.5■■□□□ 1.35
LYSMD2-201ENST00000267838 ZNF202O95125 648 aa23.5■■□□□ 1.35
LYSMD2-201ENST00000267838 GNA11P29992 359 aa23.5■■□□□ 1.35
LYSMD2-201ENST00000267838 SLC16A2P36021 539 aa23.5■■□□□ 1.35
LYSMD2-201ENST00000267838 TYRO3Q06418 890 aa23.5■■□□□ 1.35
LYSMD2-201ENST00000267838 KLRC3Q07444 240 aa23.5■■□□□ 1.35
LYSMD2-201ENST00000267838 RASA3Q14644 834 aa23.5■■□□□ 1.35
LYSMD2-201ENST00000267838 ZNF174Q15697 407 aa23.5■■□□□ 1.35
LYSMD2-201ENST00000267838 MIGA2Q7L4E1 593 aa23.5■■□□□ 1.35
LYSMD2-201ENST00000267838 SYNPO2Q9UMS6 1093 aa23.5■■□□□ 1.35
LYSMD2-201ENST00000267838 DICER1Q9UPY3 1922 aaKnown RBP23.49■■□□□ 1.35
LYSMD2-201ENST00000267838 ESYT2A0FGR8 921 aa23.49■■□□□ 1.35
LYSMD2-201ENST00000267838 MAP3K10Q02779 954 aa23.49■■□□□ 1.35
LYSMD2-201ENST00000267838 TBC1D10BQ4KMP7 808 aaPredicted RBP23.49■■□□□ 1.35
LYSMD2-201ENST00000267838 ZNF579Q8NAF0 562 aaKnown RBP23.49■■□□□ 1.35
LYSMD2-201ENST00000267838 ZBTB21Q9ULJ3 1066 aa23.49■■□□□ 1.35
LYSMD2-201ENST00000267838 SYKP43405 635 aa23.48■■□□□ 1.35
LYSMD2-201ENST00000267838 SASS6Q6UVJ0 657 aa23.48■■□□□ 1.35
LYSMD2-201ENST00000267838 MTMR8Q96EF0 704 aa23.48■■□□□ 1.35
LYSMD2-201ENST00000267838 GMCL1Q96IK5 515 aa23.48■■□□□ 1.35
LYSMD2-201ENST00000267838 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.48■■□□□ 1.35
LYSMD2-201ENST00000267838 MRVI1Q9Y6F6 885 aa23.48■■□□□ 1.35
LYSMD2-201ENST00000267838 USP17L10C9JJH3 530 aa23.47■■□□□ 1.35
LYSMD2-201ENST00000267838 NDUFB10O96000 172 aa23.47■■□□□ 1.35
LYSMD2-201ENST00000267838 LMNB1P20700 586 aa23.47■■□□□ 1.35
LYSMD2-201ENST00000267838 GRIN1Q05586 938 aa23.47■■□□□ 1.35
LYSMD2-201ENST00000267838 KIF4BQ2VIQ3 1234 aa23.47■■□□□ 1.35
LYSMD2-201ENST00000267838 SDF4Q9BRK5 362 aa23.47■■□□□ 1.35
LYSMD2-201ENST00000267838 ARHGEF10LQ9HCE6 1279 aa23.47■■□□□ 1.35
LYSMD2-201ENST00000267838 A0A1W2PRG0 241 aa23.47■■□□□ 1.35
LYSMD2-201ENST00000267838 ZBTB5O15062 677 aa23.47■■□□□ 1.35
LYSMD2-201ENST00000267838 COA7Q96BR5 231 aa23.47■■□□□ 1.35
LYSMD2-201ENST00000267838 TIGD1Q96MW7 591 aa23.47■■□□□ 1.35
LYSMD2-201ENST00000267838 SCAF8Q9UPN6 1271 aaKnown RBP23.47■■□□□ 1.35
LYSMD2-201ENST00000267838 PTMAP06454 111 aaKnown RBP23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms