RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 TSPY1Q01534 308 aa12.2□□□□□ -0.46
CHFR-201ENST00000266880 PASKQ96RG2 1323 aa12.2□□□□□ -0.46
CHFR-201ENST00000266880 TRAF1Q13077 416 aa12.2□□□□□ -0.46
CHFR-201ENST00000266880 OTUD7BQ6GQQ9 843 aa12.2□□□□□ -0.46
CHFR-201ENST00000266880 MAP7D3Q8IWC1 876 aa12.2□□□□□ -0.46
CHFR-201ENST00000266880 GARSP41250 739 aaKnown RBP12.2□□□□□ -0.46
CHFR-201ENST00000266880 SMYD3Q9H7B4 428 aa12.2□□□□□ -0.46
CHFR-201ENST00000266880 STRIP2Q9ULQ0 834 aa12.2□□□□□ -0.46
CHFR-201ENST00000266880 KIFC3Q9BVG8 833 aa12.2□□□□□ -0.46
CHFR-201ENST00000266880 SUCLA2Q9P2R7 463 aaPredicted RBP12.2□□□□□ -0.46
CHFR-201ENST00000266880 BCRP11274 1271 aa12.19□□□□□ -0.46
CHFR-201ENST00000266880 MRPS15P82914 257 aaKnown RBP12.19□□□□□ -0.46
CHFR-201ENST00000266880 PRKG1Q13976 671 aa12.19□□□□□ -0.46
CHFR-201ENST00000266880 MCUQ8NE86 351 aa12.19□□□□□ -0.46
CHFR-201ENST00000266880 DACH2Q96NX9 599 aa12.19□□□□□ -0.46
CHFR-201ENST00000266880 RIOK1Q9BRS2 568 aaKnown RBP12.19□□□□□ -0.46
CHFR-201ENST00000266880 DYNC1I2Q13409 638 aaKnown RBP12.19□□□□□ -0.46
CHFR-201ENST00000266880 KMT5BQ4FZB7 885 aa12.19□□□□□ -0.46
CHFR-201ENST00000266880 MMS22LQ6ZRQ5 1243 aa12.19□□□□□ -0.46
CHFR-201ENST00000266880 MYCT1Q8N699 235 aa12.19□□□□□ -0.46
CHFR-201ENST00000266880 TRIM58Q8NG06 486 aa12.19□□□□□ -0.46
CHFR-201ENST00000266880 CACTINQ8WUQ7 758 aaKnown RBP12.19□□□□□ -0.46
CHFR-201ENST00000266880 HAUS2Q9NVX0 235 aa12.19□□□□□ -0.46
CHFR-201ENST00000266880 DAAM1Q9Y4D1 1078 aa12.19□□□□□ -0.46
CHFR-201ENST00000266880 RPS6KB1P23443 525 aa12.19□□□□□ -0.46
CHFR-201ENST00000266880 STX1BP61266 288 aa12.19□□□□□ -0.46
CHFR-201ENST00000266880 CFAP36Q96G28 342 aa12.19□□□□□ -0.46
CHFR-201ENST00000266880 SPATA17Q96L03 361 aa12.19□□□□□ -0.46
CHFR-201ENST00000266880 DDX39AO00148 427 aaKnown RBP12.19□□□□□ -0.46
CHFR-201ENST00000266880 GRM1Q13255 1194 aa12.19□□□□□ -0.46
CHFR-201ENST00000266880 EMILIN1Q9Y6C2 1016 aa12.19□□□□□ -0.46
CHFR-201ENST00000266880 TRIM11Q96F44 468 aa12.19□□□□□ -0.46
CHFR-201ENST00000266880 NME8Q8N427 588 aa12.19□□□□□ -0.46
CHFR-201ENST00000266880 TMCO5AQ8N6Q1 288 aa12.19□□□□□ -0.46
CHFR-201ENST00000266880 TSC22D4Q9Y3Q8 395 aa12.19□□□□□ -0.46
CHFR-201ENST00000266880 SPAG7O75391 227 aa12.19□□□□□ -0.46
CHFR-201ENST00000266880 GPC4O75487 556 aa12.19□□□□□ -0.46
CHFR-201ENST00000266880 CYP2J2P51589 502 aa12.19□□□□□ -0.46
CHFR-201ENST00000266880 MLKLQ8NB16 471 aa12.19□□□□□ -0.46
CHFR-201ENST00000266880 NOP53Q9NZM5 478 aaKnown RBP12.19□□□□□ -0.46
CHFR-201ENST00000266880 H0YC42 278 aa12.19□□□□□ -0.46
CHFR-201ENST00000266880 CDC37L1Q7L3B6 337 aa12.19□□□□□ -0.46
CHFR-201ENST00000266880 ATP6V0A1Q93050 837 aa12.19□□□□□ -0.46
CHFR-201ENST00000266880 FAM167BQ9BTA0 163 aa12.19□□□□□ -0.46
CHFR-201ENST00000266880 ENAHQ8N8S7 591 aaPredicted RBP12.18□□□□□ -0.46
CHFR-201ENST00000266880 EHBP1L1Q8N3D4 1523 aa12.18□□□□□ -0.46
CHFR-201ENST00000266880 HERC4Q5GLZ8 1057 aaPredicted RBP12.18□□□□□ -0.46
CHFR-201ENST00000266880 GIMAP4Q9NUV9 329 aa12.18□□□□□ -0.46
CHFR-201ENST00000266880 GNAT2P19087 354 aa12.18□□□□□ -0.46
CHFR-201ENST00000266880 EHHADHQ08426 723 aa12.18□□□□□ -0.46
CHFR-201ENST00000266880 ACBD5Q5T8D3 534 aaPredicted RBP12.18□□□□□ -0.46
CHFR-201ENST00000266880 NUDT16Q96DE0 195 aaKnown RBP12.18□□□□□ -0.46
CHFR-201ENST00000266880 WARS2Q9UGM6 360 aaKnown RBP12.18□□□□□ -0.46
CHFR-201ENST00000266880 H0Y3Z8 333 aa12.18□□□□□ -0.46
CHFR-201ENST00000266880 TTBK2Q6IQ55 1244 aa12.18□□□□□ -0.46
CHFR-201ENST00000266880 DYMQ7RTS9 669 aa12.18□□□□□ -0.46
CHFR-201ENST00000266880 SPZ1Q9BXG8 430 aa12.18□□□□□ -0.46
CHFR-201ENST00000266880 GOLGA8QA0A0J9YX86 632 aa12.18□□□□□ -0.46
CHFR-201ENST00000266880 GOLGA8OA6NCC3 632 aa12.18□□□□□ -0.46
CHFR-201ENST00000266880 GOLGA8NF8WBI6 632 aa12.18□□□□□ -0.46
CHFR-201ENST00000266880 EXOC3O60645 756 aa12.18□□□□□ -0.46
CHFR-201ENST00000266880 CTNND1O60716 968 aaKnown RBP12.18□□□□□ -0.46
CHFR-201ENST00000266880 RNASELQ05823 741 aaKnown RBP12.18□□□□□ -0.46
CHFR-201ENST00000266880 GOLGA8FQ08AF8 430 aa12.18□□□□□ -0.46
CHFR-201ENST00000266880 C2orf54Q08AI8 447 aa12.18□□□□□ -0.46
CHFR-201ENST00000266880 GOLGA8DPQ0D2H9 430 aa12.18□□□□□ -0.46
CHFR-201ENST00000266880 CCDC85BQ15834 202 aaPredicted RBP12.18□□□□□ -0.46
CHFR-201ENST00000266880 C6orf118Q5T5N4 469 aa12.18□□□□□ -0.46
CHFR-201ENST00000266880 MPP4Q96JB8 637 aa12.18□□□□□ -0.46
CHFR-201ENST00000266880 MED10Q9BTT4 135 aa12.18□□□□□ -0.46
CHFR-201ENST00000266880 TYW1Q9NV66 732 aaKnown RBP12.18□□□□□ -0.46
CHFR-201ENST00000266880 GINS2Q9Y248 185 aa12.18□□□□□ -0.46
CHFR-201ENST00000266880 PPP1R2P41236 205 aa12.18□□□□□ -0.46
CHFR-201ENST00000266880 SLCO1A2P46721 670 aa12.18□□□□□ -0.46
CHFR-201ENST00000266880 RAB44Q7Z6P3 723 aaPredicted RBP12.18□□□□□ -0.46
CHFR-201ENST00000266880 TRIML2Q8N7C3 387 aa12.18□□□□□ -0.46
CHFR-201ENST00000266880 TRIM55Q9BYV6 548 aa12.18□□□□□ -0.46
CHFR-201ENST00000266880 SYCE1LA8MT33 242 aa12.18□□□□□ -0.46
CHFR-201ENST00000266880 INHBAP08476 426 aa12.18□□□□□ -0.46
CHFR-201ENST00000266880 RAPH1Q70E73 1250 aa12.18□□□□□ -0.46
CHFR-201ENST00000266880 TRAIPQ9BWF2 469 aa12.18□□□□□ -0.46
CHFR-201ENST00000266880 DBNLQ9UJU6 430 aaKnown RBP12.18□□□□□ -0.46
CHFR-201ENST00000266880 NCF2P19878 526 aaPredicted RBP12.17□□□□□ -0.46
CHFR-201ENST00000266880 UBE3AQ05086 875 aa12.17□□□□□ -0.46
CHFR-201ENST00000266880 NBPF9Q3BBW0 867 aa12.17□□□□□ -0.46
CHFR-201ENST00000266880 STAMQ92783 540 aa12.17□□□□□ -0.46
CHFR-201ENST00000266880 CALCRLQ16602 461 aa12.17□□□□□ -0.46
CHFR-201ENST00000266880 NBPF20Q3BBV1 942 aa12.17□□□□□ -0.46
CHFR-201ENST00000266880 FAM173BQ6P4H8 233 aa12.17□□□□□ -0.46
CHFR-201ENST00000266880 OTUD6AQ7L8S5 288 aa12.17□□□□□ -0.46
CHFR-201ENST00000266880 OLA1Q9NTK5 396 aaKnown RBP12.17□□□□□ -0.46
CHFR-201ENST00000266880 DTNBP1Q96EV8 351 aa12.17□□□□□ -0.46
CHFR-201ENST00000266880 HDLBPQ00341 1268 aaKnown RBP12.17□□□□□ -0.46
CHFR-201ENST00000266880 MYSM1Q5VVJ2 828 aa12.17□□□□□ -0.46
CHFR-201ENST00000266880 CYP4F22Q6NT55 531 aa12.17□□□□□ -0.46
CHFR-201ENST00000266880 TXKP42681 527 aa12.17□□□□□ -0.46
CHFR-201ENST00000266880 CARSP49589 748 aaKnown RBP12.17□□□□□ -0.46
CHFR-201ENST00000266880 RNF169Q8NCN4 708 aa12.17□□□□□ -0.46
CHFR-201ENST00000266880 DKC1O60832 514 aaKnown RBP eCLIP12.17□□□□□ -0.46
CHFR-201ENST00000266880 CARD10Q9BWT7 1032 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms