RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 PPP1R12CQ9BZL4 782 aa18.09■□□□□ 0.49
GPC1-201ENST00000264039 RMND1Q9NWS8 449 aa18.09■□□□□ 0.49
GPC1-201ENST00000264039 NOVA2Q9UNW9 492 aaKnown RBP18.09■□□□□ 0.49
GPC1-201ENST00000264039 PPP1R37O75864 691 aa18.08■□□□□ 0.49
GPC1-201ENST00000264039 HOXB7P09629 217 aa18.08■□□□□ 0.49
GPC1-201ENST00000264039 MAGEB6Q8N7X4 407 aa18.08■□□□□ 0.49
GPC1-201ENST00000264039 ZKSCAN4Q969J2 545 aaPredicted RBP18.08■□□□□ 0.49
GPC1-201ENST00000264039 UIMC1Q96RL1 719 aa18.08■□□□□ 0.49
GPC1-201ENST00000264039 ZBTB12Q9Y330 459 aaPredicted RBP18.08■□□□□ 0.49
GPC1-201ENST00000264039 HYOU1Q9Y4L1 999 aa18.08■□□□□ 0.49
GPC1-201ENST00000264039 DEPDC5O75140 1603 aa18.08■□□□□ 0.48
GPC1-201ENST00000264039 TTC38Q5R3I4 469 aa18.08■□□□□ 0.48
GPC1-201ENST00000264039 WDR93Q6P2C0 686 aa18.08■□□□□ 0.48
GPC1-201ENST00000264039 KCNV1Q6PIU1 500 aa18.08■□□□□ 0.48
GPC1-201ENST00000264039 EXOC1Q9NV70 894 aa18.08■□□□□ 0.48
GPC1-201ENST00000264039 RNF225M0QZC1 329 aaPredicted RBP18.08■□□□□ 0.48
GPC1-201ENST00000264039 CARSP49589 748 aaKnown RBP18.08■□□□□ 0.48
GPC1-201ENST00000264039 TCP11X2Q5H9J9 407 aa18.08■□□□□ 0.48
GPC1-201ENST00000264039 SWT1Q5T5J6 900 aaKnown RBP18.08■□□□□ 0.48
GPC1-201ENST00000264039 CCDC194A0A1B0GVG4 234 aa18.07■□□□□ 0.48
GPC1-201ENST00000264039 MPHOSPH10O00566 681 aaKnown RBP18.07■□□□□ 0.48
GPC1-201ENST00000264039 DEXIO95424 95 aa18.07■□□□□ 0.48
GPC1-201ENST00000264039 PSEN1P49768 467 aa18.07■□□□□ 0.48
GPC1-201ENST00000264039 ANTXR2P58335 489 aa18.07■□□□□ 0.48
GPC1-201ENST00000264039 PTPAQ15257 358 aa18.07■□□□□ 0.48
GPC1-201ENST00000264039 TMC4Q7Z404 712 aa18.07■□□□□ 0.48
GPC1-201ENST00000264039 SH3TC1Q8TE82 1336 aa18.07■□□□□ 0.48
GPC1-201ENST00000264039 YEATS2Q9ULM3 1422 aa18.07■□□□□ 0.48
GPC1-201ENST00000264039 CPS1P31327 1500 aa18.07■□□□□ 0.48
GPC1-201ENST00000264039 PDE2AO00408 941 aaPredicted RBP18.07■□□□□ 0.48
GPC1-201ENST00000264039 RPS6KA5O75582 802 aa18.07■□□□□ 0.48
GPC1-201ENST00000264039 SPTY2D1Q68D10 685 aaPredicted RBP18.07■□□□□ 0.48
GPC1-201ENST00000264039 TUBGCP2Q9BSJ2 902 aa18.07■□□□□ 0.48
GPC1-201ENST00000264039 PLAAQ9Y263 795 aa18.07■□□□□ 0.48
GPC1-201ENST00000264039 ASXL2Q76L83 1435 aa18.07■□□□□ 0.48
GPC1-201ENST00000264039 ADGRL3Q9HAR2 1447 aa18.07■□□□□ 0.48
GPC1-201ENST00000264039 ZNF18P17022 549 aa18.07■□□□□ 0.48
GPC1-201ENST00000264039 CEBPAP49715 358 aaPredicted RBP18.07■□□□□ 0.48
GPC1-201ENST00000264039 KLK7P49862 253 aa18.07■□□□□ 0.48
GPC1-201ENST00000264039 PDE4DQ08499 809 aa18.07■□□□□ 0.48
GPC1-201ENST00000264039 CCDC25Q86WR0 208 aa18.07■□□□□ 0.48
GPC1-201ENST00000264039 TBC1D10CQ8IV04 446 aa18.07■□□□□ 0.48
GPC1-201ENST00000264039 CCDC63Q8NA47 563 aa18.07■□□□□ 0.48
GPC1-201ENST00000264039 PAIP2Q9BPZ3 127 aaKnown RBP18.07■□□□□ 0.48
GPC1-201ENST00000264039 SEC31BQ9NQW1 1179 aa18.07■□□□□ 0.48
GPC1-201ENST00000264039 SAMD15Q9P1V8 674 aa18.07■□□□□ 0.48
GPC1-201ENST00000264039 HPSEQ9Y251 543 aa18.07■□□□□ 0.48
GPC1-201ENST00000264039 BAZ2BQ9UIF8 2168 aaKnown RBP18.06■□□□□ 0.48
GPC1-201ENST00000264039 PPRC1Q5VV67 1664 aaKnown RBP18.06■□□□□ 0.48
GPC1-201ENST00000264039 ZNF532Q9HCE3 1301 aa18.06■□□□□ 0.48
GPC1-201ENST00000264039 SNRPA1P09661 255 aaKnown RBP18.06■□□□□ 0.48
GPC1-201ENST00000264039 TATP17735 454 aaPredicted RBP18.06■□□□□ 0.48
GPC1-201ENST00000264039 CATIPQ7Z7H3 387 aa18.06■□□□□ 0.48
GPC1-201ENST00000264039 GSDMAQ96QA5 445 aa18.06■□□□□ 0.48
GPC1-201ENST00000264039 UBN2Q6ZU65 1347 aa18.06■□□□□ 0.48
GPC1-201ENST00000264039 PHF20L1A8MW92 1017 aa18.06■□□□□ 0.48
GPC1-201ENST00000264039 PCK1P35558 622 aa18.06■□□□□ 0.48
GPC1-201ENST00000264039 KCNV2Q8TDN2 545 aa18.06■□□□□ 0.48
GPC1-201ENST00000264039 NOX5Q96PH1 765 aa18.06■□□□□ 0.48
GPC1-201ENST00000264039 ZSWIM5Q9P217 1185 aa18.06■□□□□ 0.48
GPC1-201ENST00000264039 VWDEQ8N2E2 1590 aa18.06■□□□□ 0.48
GPC1-201ENST00000264039 MMP1P03956 469 aa18.06■□□□□ 0.48
GPC1-201ENST00000264039 MB21D2Q8IYB1 491 aaPredicted RBP18.06■□□□□ 0.48
GPC1-201ENST00000264039 TSEN2Q8NCE0 465 aaKnown RBP18.06■□□□□ 0.48
GPC1-201ENST00000264039 SETBP1Q9Y6X0 1596 aa18.05■□□□□ 0.48
GPC1-201ENST00000264039 KCNK3O14649 394 aa18.05■□□□□ 0.48
GPC1-201ENST00000264039 CTNND1O60716 968 aaKnown RBP18.05■□□□□ 0.48
GPC1-201ENST00000264039 SCARF1Q14162 830 aa18.05■□□□□ 0.48
GPC1-201ENST00000264039 A6NNZ2 444 aa18.05■□□□□ 0.48
GPC1-201ENST00000264039 SLC8A1P32418 973 aa18.05■□□□□ 0.48
GPC1-201ENST00000264039 MAP3K12Q12852 859 aa18.05■□□□□ 0.48
GPC1-201ENST00000264039 RAPGEF1Q13905 1077 aa18.05■□□□□ 0.48
GPC1-201ENST00000264039 TUBB8Q3ZCM7 444 aa18.05■□□□□ 0.48
GPC1-201ENST00000264039 TRAPPC11Q7Z392 1133 aa18.05■□□□□ 0.48
GPC1-201ENST00000264039 TMEM87BQ96K49 555 aa18.05■□□□□ 0.48
GPC1-201ENST00000264039 NRXN1Q9ULB1 1477 aa18.05■□□□□ 0.48
GPC1-201ENST00000264039 RPN1P04843 607 aaKnown RBP18.05■□□□□ 0.48
GPC1-201ENST00000264039 GNPTABQ3T906 1256 aa18.05■□□□□ 0.48
GPC1-201ENST00000264039 ZBTB10Q96DT7 871 aa18.05■□□□□ 0.48
GPC1-201ENST00000264039 BABAM1Q9NWV8 329 aa18.05■□□□□ 0.48
GPC1-201ENST00000264039 PLEKP08567 350 aaPredicted RBP18.04■□□□□ 0.48
GPC1-201ENST00000264039 TCP1P17987 556 aaKnown RBP18.04■□□□□ 0.48
GPC1-201ENST00000264039 TRHP20396 242 aaPredicted RBP18.04■□□□□ 0.48
GPC1-201ENST00000264039 CCDC50Q8IVM0 306 aa18.04■□□□□ 0.48
GPC1-201ENST00000264039 KIF9Q9HAQ2 790 aa18.04■□□□□ 0.48
GPC1-201ENST00000264039 FBXO2Q9UK22 296 aaPredicted RBP18.04■□□□□ 0.48
GPC1-201ENST00000264039 SRPRBQ9Y5M8 271 aaKnown RBP18.04■□□□□ 0.48
GPC1-201ENST00000264039 ADGRB3O60242 1522 aa18.04■□□□□ 0.48
GPC1-201ENST00000264039 EIF4A3P38919 411 aaKnown RBP18.04■□□□□ 0.48
GPC1-201ENST00000264039 PRCPP42785 496 aa18.04■□□□□ 0.48
GPC1-201ENST00000264039 TNNC1P63316 161 aa18.04■□□□□ 0.48
GPC1-201ENST00000264039 CYB5D1Q6P9G0 228 aa18.04■□□□□ 0.48
GPC1-201ENST00000264039 MIEF2Q96C03 454 aa18.04■□□□□ 0.48
GPC1-201ENST00000264039 EPN3Q9H201 632 aa18.04■□□□□ 0.48
GPC1-201ENST00000264039 IFIT1BQ5T764 474 aaKnown RBP18.03■□□□□ 0.48
GPC1-201ENST00000264039 SPATS2Q86XZ4 545 aaKnown RBP18.03■□□□□ 0.48
GPC1-201ENST00000264039 MB21D1Q8N884 522 aa18.03■□□□□ 0.48
GPC1-201ENST00000264039 LBHD1Q9BQE6 289 aaPredicted RBP18.03■□□□□ 0.48
GPC1-201ENST00000264039 KAT6BQ8WYB5 2073 aa18.03■□□□□ 0.48
GPC1-201ENST00000264039 PRPF6O94906 941 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms