RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 TRMT44Q8IYL2 757 aaKnown RBP19.25■□□□□ 0.67
FOXA1-201ENST00000250448 SMARCE1Q969G3 411 aa19.25■□□□□ 0.67
FOXA1-201ENST00000250448 NUP133Q8WUM0 1156 aa19.24■□□□□ 0.67
FOXA1-201ENST00000250448 WASF1Q92558 559 aa19.24■□□□□ 0.67
FOXA1-201ENST00000250448 SERTAD1Q9UHV2 236 aa19.24■□□□□ 0.67
FOXA1-201ENST00000250448 PTPREP23469 700 aa19.24■□□□□ 0.67
FOXA1-201ENST00000250448 LIFRP42702 1097 aa19.24■□□□□ 0.67
FOXA1-201ENST00000250448 TOB1P50616 345 aaPredicted RBP19.24■□□□□ 0.67
FOXA1-201ENST00000250448 GRIN1Q05586 938 aa19.24■□□□□ 0.67
FOXA1-201ENST00000250448 SAFBQ15424 915 aaKnown RBP eCLIP19.24■□□□□ 0.67
FOXA1-201ENST00000250448 C12orf60Q5U649 245 aa19.24■□□□□ 0.67
FOXA1-201ENST00000250448 CCDC125Q86Z20 511 aa19.24■□□□□ 0.67
FOXA1-201ENST00000250448 ZNF277Q9NRM2 450 aaPredicted RBP19.24■□□□□ 0.67
FOXA1-201ENST00000250448 RNF216Q9NWF9 866 aaPredicted RBP19.24■□□□□ 0.67
FOXA1-201ENST00000250448 ERICH2A1L162 156 aa19.23■□□□□ 0.67
FOXA1-201ENST00000250448 BTBD18B2RXH4 712 aa19.23■□□□□ 0.67
FOXA1-201ENST00000250448 POLR2DO15514 142 aaKnown RBP19.23■□□□□ 0.67
FOXA1-201ENST00000250448 MMP1P03956 469 aa19.23■□□□□ 0.67
FOXA1-201ENST00000250448 SARSP49591 514 aaKnown RBP19.23■□□□□ 0.67
FOXA1-201ENST00000250448 PODNQ7Z5L7 613 aa19.23■□□□□ 0.67
FOXA1-201ENST00000250448 ENAHQ8N8S7 591 aaPredicted RBP19.23■□□□□ 0.67
FOXA1-201ENST00000250448 DESI2Q9BSY9 194 aa19.23■□□□□ 0.67
FOXA1-201ENST00000250448 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.23■□□□□ 0.67
FOXA1-201ENST00000250448 KIAA1551Q9HCM1 1747 aa19.23■□□□□ 0.67
FOXA1-201ENST00000250448 SART3Q15020 963 aaKnown RBP19.23■□□□□ 0.67
FOXA1-201ENST00000250448 DIS3L2Q8IYB7 885 aaKnown RBP19.23■□□□□ 0.67
FOXA1-201ENST00000250448 TRIML1Q8N9V2 468 aa19.23■□□□□ 0.67
FOXA1-201ENST00000250448 RABGGTAQ92696 567 aa19.23■□□□□ 0.67
FOXA1-201ENST00000250448 GAKO14976 1311 aa19.23■□□□□ 0.67
FOXA1-201ENST00000250448 IFNAR1P17181 557 aa19.22■□□□□ 0.67
FOXA1-201ENST00000250448 FLT1P17948 1338 aa19.22■□□□□ 0.67
FOXA1-201ENST00000250448 OAS2P29728 719 aaKnown RBP19.22■□□□□ 0.67
FOXA1-201ENST00000250448 KARSQ15046 597 aaKnown RBP19.22■□□□□ 0.67
FOXA1-201ENST00000250448 GOLGA1Q92805 767 aa19.22■□□□□ 0.67
FOXA1-201ENST00000250448 DHX58Q96C10 678 aa19.22■□□□□ 0.67
FOXA1-201ENST00000250448 SNED1Q8TER0 1413 aa19.22■□□□□ 0.67
FOXA1-201ENST00000250448 NID2Q14112 1375 aa19.22■□□□□ 0.67
FOXA1-201ENST00000250448 YDJCA8MPS7 323 aa19.22■□□□□ 0.67
FOXA1-201ENST00000250448 CACNB3P54284 484 aa19.22■□□□□ 0.67
FOXA1-201ENST00000250448 SBK1Q52WX2 424 aa19.22■□□□□ 0.67
FOXA1-201ENST00000250448 ZSCAN10Q96SZ4 725 aaPredicted RBP19.22■□□□□ 0.67
FOXA1-201ENST00000250448 CDK5RAP2Q96SN8 1893 aa19.22■□□□□ 0.67
FOXA1-201ENST00000250448 GUCY1A2P33402 732 aa19.22■□□□□ 0.67
FOXA1-201ENST00000250448 SEC23AQ15436 765 aa19.22■□□□□ 0.67
FOXA1-201ENST00000250448 GRAMD1CQ8IYS0 662 aa19.22■□□□□ 0.67
FOXA1-201ENST00000250448 ARFGAP3Q9NP61 516 aa19.22■□□□□ 0.67
FOXA1-201ENST00000250448 KCNJ14Q9UNX9 436 aa19.22■□□□□ 0.67
FOXA1-201ENST00000250448 SLURP2P0DP57 97 aa19.21■□□□□ 0.67
FOXA1-201ENST00000250448 RBM5P52756 815 aaKnown RBP eCLIP19.21■□□□□ 0.67
FOXA1-201ENST00000250448 RILPL1Q5EBL4 403 aa19.21■□□□□ 0.67
FOXA1-201ENST00000250448 DACT2Q5SW24 774 aa19.21■□□□□ 0.67
FOXA1-201ENST00000250448 FAM163AQ96GL9 167 aaPredicted RBP19.21■□□□□ 0.67
FOXA1-201ENST00000250448 MED15Q96RN5 788 aa19.21■□□□□ 0.67
FOXA1-201ENST00000250448 PARD6BQ9BYG5 372 aa19.21■□□□□ 0.67
FOXA1-201ENST00000250448 MRPL44Q9H9J2 332 aaKnown RBP19.21■□□□□ 0.67
FOXA1-201ENST00000250448 DDX4Q9NQI0 724 aaKnown RBP19.21■□□□□ 0.67
FOXA1-201ENST00000250448 SAMSN1Q9NSI8 373 aaKnown RBP19.21■□□□□ 0.67
FOXA1-201ENST00000250448 TSPY2A6NKD2 308 aa19.21■□□□□ 0.67
FOXA1-201ENST00000250448 SLF2Q8IX21 1173 aa19.21■□□□□ 0.67
FOXA1-201ENST00000250448 CCDC12Q8WUD4 166 aaPredicted RBP19.21■□□□□ 0.67
FOXA1-201ENST00000250448 LAMB1P07942 1786 aa19.21■□□□□ 0.67
FOXA1-201ENST00000250448 FGRP09769 529 aa19.2■□□□□ 0.66
FOXA1-201ENST00000250448 SMC1AQ14683 1233 aaKnown RBP19.2■□□□□ 0.66
FOXA1-201ENST00000250448 NR1I3Q14994 352 aa19.2■□□□□ 0.66
FOXA1-201ENST00000250448 TMED8Q6PL24 325 aaPredicted RBP19.2■□□□□ 0.66
FOXA1-201ENST00000250448 ZNF654Q8IZM8 581 aa19.2■□□□□ 0.66
FOXA1-201ENST00000250448 ZNF579Q8NAF0 562 aaKnown RBP19.2■□□□□ 0.66
FOXA1-201ENST00000250448 FOXP1Q9H334 677 aaPredicted RBP19.2■□□□□ 0.66
FOXA1-201ENST00000250448 USP40Q9NVE5 1235 aa19.2■□□□□ 0.66
FOXA1-201ENST00000250448 NAV1Q8NEY1 1877 aa19.2■□□□□ 0.66
FOXA1-201ENST00000250448 A0A1B0GTH6 734 aa19.2■□□□□ 0.66
FOXA1-201ENST00000250448 ACTN4O43707 911 aaKnown RBP19.2■□□□□ 0.66
FOXA1-201ENST00000250448 CCDC175P0C221 793 aa19.2■□□□□ 0.66
FOXA1-201ENST00000250448 POLD1P28340 1107 aa19.2■□□□□ 0.66
FOXA1-201ENST00000250448 HNRNPH2P55795 449 aaKnown RBP19.2■□□□□ 0.66
FOXA1-201ENST00000250448 MTF1Q14872 753 aa19.2■□□□□ 0.66
FOXA1-201ENST00000250448 TRIM22Q8IYM9 498 aa19.2■□□□□ 0.66
FOXA1-201ENST00000250448 CCDC34Q96HJ3 373 aa19.2■□□□□ 0.66
FOXA1-201ENST00000250448 MTFR1LQ9H019 292 aa19.2■□□□□ 0.66
FOXA1-201ENST00000250448 MKNK2Q9HBH9 465 aa19.2■□□□□ 0.66
FOXA1-201ENST00000250448 AKR1B15C9JRZ8 316 aaPredicted RBP19.19■□□□□ 0.66
FOXA1-201ENST00000250448 RAD17O75943 681 aa19.19■□□□□ 0.66
FOXA1-201ENST00000250448 TFAP4Q01664 338 aa19.19■□□□□ 0.66
FOXA1-201ENST00000250448 KANK3Q6NY19 840 aa19.19■□□□□ 0.66
FOXA1-201ENST00000250448 IQCA1Q86XH1 822 aa19.19■□□□□ 0.66
FOXA1-201ENST00000250448 TXLNBQ8N3L3 684 aa19.19■□□□□ 0.66
FOXA1-201ENST00000250448 NEK11Q8NG66 645 aa19.19■□□□□ 0.66
FOXA1-201ENST00000250448 PANX2Q96RD6 677 aa19.19■□□□□ 0.66
FOXA1-201ENST00000250448 USP17L3A6NCW0 530 aa19.19■□□□□ 0.66
FOXA1-201ENST00000250448 USP17L4A6NCW7 530 aa19.19■□□□□ 0.66
FOXA1-201ENST00000250448 CRKP46108 304 aa19.19■□□□□ 0.66
FOXA1-201ENST00000250448 IRX5P78411 483 aaPredicted RBP19.19■□□□□ 0.66
FOXA1-201ENST00000250448 IFIT1BQ5T764 474 aaKnown RBP19.19■□□□□ 0.66
FOXA1-201ENST00000250448 JAKMIP3Q5VZ66 844 aa19.19■□□□□ 0.66
FOXA1-201ENST00000250448 USP17L1Q7RTZ2 530 aa19.19■□□□□ 0.66
FOXA1-201ENST00000250448 UPF1Q92900 1129 aaKnown RBP eCLIP19.19■□□□□ 0.66
FOXA1-201ENST00000250448 PCDHB6Q9Y5E3 794 aa19.19■□□□□ 0.66
FOXA1-201ENST00000250448 ORC4O43929 436 aa19.18■□□□□ 0.66
FOXA1-201ENST00000250448 ERCC5P28715 1186 aaPredicted RBP19.18■□□□□ 0.66
FOXA1-201ENST00000250448 TXLNAP40222 546 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms