RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 CTNND1O60716 968 aaKnown RBP15.26■□□□□ 0.03
SLIRP-201ENST00000238688 RASA1P20936 1047 aa15.26■□□□□ 0.03
SLIRP-201ENST00000238688 CDK8P49336 464 aa15.26■□□□□ 0.03
SLIRP-201ENST00000238688 TFAP4Q01664 338 aa15.26■□□□□ 0.03
SLIRP-201ENST00000238688 CCDC84Q86UT8 332 aaPredicted RBP15.26■□□□□ 0.03
SLIRP-201ENST00000238688 KAT14Q9H8E8 782 aa15.26■□□□□ 0.03
SLIRP-201ENST00000238688 SYNPO2Q9UMS6 1093 aa15.26■□□□□ 0.03
SLIRP-201ENST00000238688 ZHX2Q9Y6X8 837 aa15.26■□□□□ 0.03
SLIRP-201ENST00000238688 A0A0G2JLL6 359 aaPredicted RBP15.25■□□□□ 0.03
SLIRP-201ENST00000238688 PDHXO00330 501 aa15.25■□□□□ 0.03
SLIRP-201ENST00000238688 PRPF3O43395 683 aaKnown RBP15.25■□□□□ 0.03
SLIRP-201ENST00000238688 PRPF40AO75400 957 aaKnown RBP15.25■□□□□ 0.03
SLIRP-201ENST00000238688 CDC27P30260 824 aa15.25■□□□□ 0.03
SLIRP-201ENST00000238688 ADD1P35611 737 aaKnown RBP15.25■□□□□ 0.03
SLIRP-201ENST00000238688 SAFBQ15424 915 aaKnown RBP eCLIP15.25■□□□□ 0.03
SLIRP-201ENST00000238688 PRRT2Q7Z6L0 340 aaPredicted RBP15.25■□□□□ 0.03
SLIRP-201ENST00000238688 METTL16Q86W50 562 aaKnown RBP15.25■□□□□ 0.03
SLIRP-201ENST00000238688 FOXP4Q8IVH2 680 aaPredicted RBP15.25■□□□□ 0.03
SLIRP-201ENST00000238688 CRACR2BQ8N4Y2 399 aaPredicted RBP15.25■□□□□ 0.03
SLIRP-201ENST00000238688 ARMC5Q96C12 935 aa15.25■□□□□ 0.03
SLIRP-201ENST00000238688 PI4KBQ9UBF8 816 aa15.25■□□□□ 0.03
SLIRP-201ENST00000238688 LOC285556D6RIA3 1793 aa15.25■□□□□ 0.03
SLIRP-201ENST00000238688 BRCA2P51587 3418 aa15.24■□□□□ 0.03
SLIRP-201ENST00000238688 LETM1O95202 739 aaPredicted RBP15.24■□□□□ 0.03
SLIRP-201ENST00000238688 CYP2D6P10635 497 aa15.24■□□□□ 0.03
SLIRP-201ENST00000238688 TOP1P11387 765 aaKnown RBP15.24■□□□□ 0.03
SLIRP-201ENST00000238688 PLCD1P51178 756 aa15.24■□□□□ 0.03
SLIRP-201ENST00000238688 LACTBP83111 547 aaPredicted RBP15.24■□□□□ 0.03
SLIRP-201ENST00000238688 TMTC3Q6ZXV5 915 aa15.24■□□□□ 0.03
SLIRP-201ENST00000238688 ALG1Q9BT22 464 aa15.24■□□□□ 0.03
SLIRP-201ENST00000238688 INCENPQ9NQS7 918 aa15.24■□□□□ 0.03
SLIRP-201ENST00000238688 CPA4Q9UI42 421 aa15.24■□□□□ 0.03
SLIRP-201ENST00000238688 PTCH2Q9Y6C5 1203 aa15.24■□□□□ 0.03
SLIRP-201ENST00000238688 POTEFA5A3E0 1075 aa15.23■□□□□ 0.03
SLIRP-201ENST00000238688 PRDM1O75626 825 aa15.23■□□□□ 0.03
SLIRP-201ENST00000238688 BCRP11274 1271 aa15.23■□□□□ 0.03
SLIRP-201ENST00000238688 RCSD1Q6JBY9 416 aa15.23■□□□□ 0.03
SLIRP-201ENST00000238688 NBPF11Q86T75 865 aa15.23■□□□□ 0.03
SLIRP-201ENST00000238688 ZKSCAN3Q9BRR0 538 aa15.23■□□□□ 0.03
SLIRP-201ENST00000238688 DNAJC18Q9H819 358 aa15.23■□□□□ 0.03
SLIRP-201ENST00000238688 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.23■□□□□ 0.03
SLIRP-201ENST00000238688 MORC2Q9Y6X9 1032 aaPredicted RBP15.23■□□□□ 0.03
SLIRP-201ENST00000238688 MYH4Q9Y623 1939 aa15.23■□□□□ 0.03
SLIRP-201ENST00000238688 YEATS4O95619 227 aa15.22■□□□□ 0.03
SLIRP-201ENST00000238688 CYP2C8P10632 490 aa15.22■□□□□ 0.03
SLIRP-201ENST00000238688 U2AF2P26368 475 aaKnown RBP eCLIP15.22■□□□□ 0.031e-7■□□□□ 8
SLIRP-201ENST00000238688 JAG1P78504 1218 aa15.22■□□□□ 0.03
SLIRP-201ENST00000238688 DNM1Q05193 864 aaKnown RBP15.22■□□□□ 0.03
SLIRP-201ENST00000238688 GRM4Q14833 912 aa15.22■□□□□ 0.03
SLIRP-201ENST00000238688 FOXD4L5Q5VV16 416 aaPredicted RBP15.22■□□□□ 0.03
SLIRP-201ENST00000238688 PNMA1Q8ND90 353 aa15.22■□□□□ 0.03
SLIRP-201ENST00000238688 NKX2-3Q8TAU0 364 aa15.22■□□□□ 0.03
SLIRP-201ENST00000238688 NUP133Q8WUM0 1156 aa15.22■□□□□ 0.03
SLIRP-201ENST00000238688 FOXD4L4Q8WXT5 416 aaPredicted RBP15.22■□□□□ 0.03
SLIRP-201ENST00000238688 SPATA32Q96LK8 384 aa15.22■□□□□ 0.03
SLIRP-201ENST00000238688 FOXP1Q9H334 677 aaPredicted RBP15.22■□□□□ 0.03
SLIRP-201ENST00000238688 SENP2Q9HC62 589 aa15.22■□□□□ 0.03
SLIRP-201ENST00000238688 SH3GLB2Q9NR46 395 aa15.22■□□□□ 0.03
SLIRP-201ENST00000238688 PICK1Q9NRD5 415 aa15.22■□□□□ 0.03
SLIRP-201ENST00000238688 POLR3EQ9NVU0 708 aa15.22■□□□□ 0.03
SLIRP-201ENST00000238688 HERC5Q9UII4 1024 aaKnown RBP15.22■□□□□ 0.03
SLIRP-201ENST00000238688 MKI67P46013 3256 aaKnown RBP15.21■□□□□ 0.03
SLIRP-201ENST00000238688 hCG_1984214I3L0E3 225 aa15.21■□□□□ 0.03
SLIRP-201ENST00000238688 CAP2P40123 477 aa15.21■□□□□ 0.03
SLIRP-201ENST00000238688 FUT2Q10981 343 aa15.21■□□□□ 0.03
SLIRP-201ENST00000238688 FAM47AQ5JRC9 791 aa15.21■□□□□ 0.03
SLIRP-201ENST00000238688 L1TD1Q5T7N2 865 aaKnown RBP15.21■□□□□ 0.03
SLIRP-201ENST00000238688 GALNT17Q6IS24 598 aa15.21■□□□□ 0.03
SLIRP-201ENST00000238688 ZNF713Q8N859 430 aaPredicted RBP15.21■□□□□ 0.03
SLIRP-201ENST00000238688 KCNG4Q8TDN1 519 aa15.21■□□□□ 0.03
SLIRP-201ENST00000238688 ZNF333Q96JL9 665 aa15.21■□□□□ 0.03
SLIRP-201ENST00000238688 TRIM47Q96LD4 638 aa15.21■□□□□ 0.03
SLIRP-201ENST00000238688 SLC26A6Q9BXS9 759 aa15.21■□□□□ 0.03
SLIRP-201ENST00000238688 BRMS1Q9HCU9 246 aa15.21■□□□□ 0.03
SLIRP-201ENST00000238688 IL17RBQ9NRM6 502 aa15.21■□□□□ 0.03
SLIRP-201ENST00000238688 SAP30BPQ9UHR5 308 aaKnown RBP15.21■□□□□ 0.03
SLIRP-201ENST00000238688 RCOR1Q9UKL0 485 aa15.21■□□□□ 0.03
SLIRP-201ENST00000238688 CNPY2Q9Y2B0 182 aa15.21■□□□□ 0.03
SLIRP-201ENST00000238688 IGKV6D-41A0A0C4DH26 115 aa15.2■□□□□ 0.02
SLIRP-201ENST00000238688 GOLGA6L4A6NEF3 574 aa15.2■□□□□ 0.02
SLIRP-201ENST00000238688 ZNF445P59923 1031 aa15.2■□□□□ 0.02
SLIRP-201ENST00000238688 SHROOM1Q2M3G4 852 aaPredicted RBP15.2■□□□□ 0.02
SLIRP-201ENST00000238688 KRT40Q6A162 431 aa15.2■□□□□ 0.02
SLIRP-201ENST00000238688 FASTKD5Q7L8L6 764 aaKnown RBP15.2■□□□□ 0.02
SLIRP-201ENST00000238688 FERMT3Q86UX7 667 aa15.2■□□□□ 0.02
SLIRP-201ENST00000238688 DYNLL2Q96FJ2 89 aa15.2■□□□□ 0.02
SLIRP-201ENST00000238688 SPZ1Q9BXG8 430 aa15.2■□□□□ 0.02
SLIRP-201ENST00000238688 TRIM34Q9BYJ4 488 aa15.2■□□□□ 0.02
SLIRP-201ENST00000238688 RTEL1Q9NZ71 1219 aa15.2■□□□□ 0.02
SLIRP-201ENST00000238688 SLC45A1Q9Y2W3 748 aa15.2■□□□□ 0.02
SLIRP-201ENST00000238688 TRIM75PA6NK02 468 aa15.19■□□□□ 0.02
SLIRP-201ENST00000238688 FIBPO43427 364 aa15.19■□□□□ 0.02
SLIRP-201ENST00000238688 ECM2O94769 699 aaPredicted RBP15.19■□□□□ 0.02
SLIRP-201ENST00000238688 TTLL1O95922 423 aa15.19■□□□□ 0.02
SLIRP-201ENST00000238688 BMP15O95972 392 aa15.19■□□□□ 0.02
SLIRP-201ENST00000238688 MMP1P03956 469 aa15.19■□□□□ 0.02
SLIRP-201ENST00000238688 CALML3P27482 149 aa15.19■□□□□ 0.02
SLIRP-201ENST00000238688 PSMC4P43686 418 aa15.19■□□□□ 0.02
SLIRP-201ENST00000238688 NASPP49321 788 aaPredicted RBP15.19■□□□□ 0.02
SLIRP-201ENST00000238688 ASPRV1Q53RT3 343 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms