RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 ANKRD50Q9ULJ7 1429 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 A0A087WUV0 522 aaPredicted RBP12.16□□□□□ -0.46
MSH6-201ENST00000234420 ARHGAP4P98171 946 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 GDAP1Q8TB36 358 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 HOMER3Q9NSC5 361 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 SUFUQ9UMX1 484 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 CD109Q6YHK3 1445 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 TYW5A2RUC4 315 aaKnown RBP12.16□□□□□ -0.46
MSH6-201ENST00000234420 IGHDP01880 384 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 PDHA1P08559 390 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 SKIP12755 728 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 TBC1D8BQ0IIM8 1120 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 PTPROQ16827 1216 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 KRT80Q6KB66 452 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 DTHD1Q6ZMT9 781 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 FAM89AQ96GI7 184 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 NME8Q8N427 588 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 TMEM106CQ9BVX2 250 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 MED4Q9NPJ6 270 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 FAM8A1Q9UBU6 413 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 FAM135AQ9P2D6 1515 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 GOLGA8CPA6NN73 597 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 ZNF75DP51815 510 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 GOLGA8FQ08AF8 430 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 GOLGA8DPQ0D2H9 430 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 CTAGE3PQ8IX95 158 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 VWA3AA6NCI4 1184 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 HNRNPCL2B2RXH8 293 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 M0R2C6 588 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 HNRNPCL1O60812 293 aaKnown RBP12.16□□□□□ -0.46
MSH6-201ENST00000234420 TNFAIP3P21580 790 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 IFNAR2P48551 515 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 DCUN1D2Q6PH85 259 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 TRIML2Q8N7C3 387 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 TSC22D4Q9Y3Q8 395 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 ELP1O95163 1332 aa12.16□□□□□ -0.46
MSH6-201ENST00000234420 ANKRD65E5RJM6 399 aa12.15□□□□□ -0.46
MSH6-201ENST00000234420 GSTA1P08263 222 aa12.15□□□□□ -0.46
MSH6-201ENST00000234420 GSTA2P09210 222 aa12.15□□□□□ -0.46
MSH6-201ENST00000234420 ST13P4Q8IZP2 240 aaPredicted RBP12.15□□□□□ -0.46
MSH6-201ENST00000234420 SSH1Q8WYL5 1049 aa12.15□□□□□ -0.46
MSH6-201ENST00000234420 SH3GL3Q99963 347 aa12.15□□□□□ -0.46
MSH6-201ENST00000234420 MMTAG2Q9BU76 263 aaKnown RBP12.15□□□□□ -0.46
MSH6-201ENST00000234420 ELF1P32519 619 aa12.15□□□□□ -0.46
MSH6-201ENST00000234420 NBPF20Q3BBV1 942 aa12.15□□□□□ -0.46
MSH6-201ENST00000234420 LMBR1LQ6UX01 489 aa12.15□□□□□ -0.46
MSH6-201ENST00000234420 CAPN12Q6ZSI9 719 aa12.15□□□□□ -0.46
MSH6-201ENST00000234420 CCDC197Q8NCU1 140 aa12.15□□□□□ -0.46
MSH6-201ENST00000234420 ARMC2Q8NEN0 867 aa12.15□□□□□ -0.46
MSH6-201ENST00000234420 MAPKAPK5Q8IW41 473 aa12.15□□□□□ -0.46
MSH6-201ENST00000234420 MRPL44Q9H9J2 332 aaKnown RBP12.15□□□□□ -0.46
MSH6-201ENST00000234420 PAIP2BQ9ULR5 123 aaKnown RBP12.15□□□□□ -0.46
MSH6-201ENST00000234420 FGD5Q6ZNL6 1462 aa12.15□□□□□ -0.46
MSH6-201ENST00000234420 HMGB1P1B2RPK0 211 aaPredicted RBP12.15□□□□□ -0.46
MSH6-201ENST00000234420 TTC4O95801 387 aa12.15□□□□□ -0.46
MSH6-201ENST00000234420 S100BP04271 92 aaPredicted RBP12.15□□□□□ -0.46
MSH6-201ENST00000234420 OCM2P0CE71 109 aa12.15□□□□□ -0.46
MSH6-201ENST00000234420 OCMP0CE72 109 aaPredicted RBP12.15□□□□□ -0.46
MSH6-201ENST00000234420 TRAPPC10P48553 1259 aa12.15□□□□□ -0.46
MSH6-201ENST00000234420 MYOM3Q5VTT5 1437 aa12.15□□□□□ -0.46
MSH6-201ENST00000234420 SLC52A1Q9NWF4 448 aa12.15□□□□□ -0.46
MSH6-201ENST00000234420 ACEP12821 1306 aa12.15□□□□□ -0.46
MSH6-201ENST00000234420 N4BP1O75113 896 aaKnown RBP12.15□□□□□ -0.46
MSH6-201ENST00000234420 SLC12A2P55011 1212 aa12.15□□□□□ -0.46
MSH6-201ENST00000234420 SART1O43290 800 aaKnown RBP12.15□□□□□ -0.47
MSH6-201ENST00000234420 SUN1O94901 812 aa12.15□□□□□ -0.47
MSH6-201ENST00000234420 TXKP42681 527 aa12.15□□□□□ -0.47
MSH6-201ENST00000234420 TSPY1Q01534 308 aa12.15□□□□□ -0.47
MSH6-201ENST00000234420 NRBF2Q96F24 287 aa12.15□□□□□ -0.47
MSH6-201ENST00000234420 ZNF215Q9UL58 517 aaPredicted RBP12.15□□□□□ -0.47
MSH6-201ENST00000234420 PLCG2P16885 1265 aa12.14□□□□□ -0.47
MSH6-201ENST00000234420 PSMC1P62191 440 aaKnown RBP12.14□□□□□ -0.47
MSH6-201ENST00000234420 FANCCQ00597 558 aa12.14□□□□□ -0.47
MSH6-201ENST00000234420 NKX1-1Q15270 411 aaPredicted RBP12.14□□□□□ -0.47
MSH6-201ENST00000234420 MAP7D3Q8IWC1 876 aa12.14□□□□□ -0.47
MSH6-201ENST00000234420 SLF1Q9BQI6 1058 aa12.14□□□□□ -0.47
MSH6-201ENST00000234420 POLR3CQ9BUI4 534 aaPredicted RBP12.14□□□□□ -0.47
MSH6-201ENST00000234420 IFT122Q9HBG6 1241 aa12.14□□□□□ -0.47
MSH6-201ENST00000234420 G3BP2Q9UN86 482 aaKnown RBP12.14□□□□□ -0.47
MSH6-201ENST00000234420 RARSP54136 660 aaKnown RBP12.14□□□□□ -0.47
MSH6-201ENST00000234420 KAZNQ674X7 775 aa12.14□□□□□ -0.47
MSH6-201ENST00000234420 SRGAP1Q7Z6B7 1085 aa12.14□□□□□ -0.47
MSH6-201ENST00000234420 CCDC68Q9H2F9 335 aa12.14□□□□□ -0.47
MSH6-201ENST00000234420 ARMT1Q9H993 441 aa12.14□□□□□ -0.47
MSH6-201ENST00000234420 GIMAP4Q9NUV9 329 aa12.14□□□□□ -0.47
MSH6-201ENST00000234420 ERBB3P21860 1342 aa12.14□□□□□ -0.47
MSH6-201ENST00000234420 ZBTB7AO95365 584 aa12.14□□□□□ -0.47
MSH6-201ENST00000234420 ZC3H18Q86VM9 953 aaKnown RBP12.14□□□□□ -0.47
MSH6-201ENST00000234420 KLHL29Q96CT2 875 aa12.14□□□□□ -0.47
MSH6-201ENST00000234420 INPP5FQ9Y2H2 1132 aa12.14□□□□□ -0.47
MSH6-201ENST00000234420 SUGT1Q9Y2Z0 365 aa12.14□□□□□ -0.47
MSH6-201ENST00000234420 NPHP3Q7Z494 1330 aa12.14□□□□□ -0.47
MSH6-201ENST00000234420 BMP15O95972 392 aa12.14□□□□□ -0.47
MSH6-201ENST00000234420 FAM117BQ6P1L5 589 aa12.14□□□□□ -0.47
MSH6-201ENST00000234420 TRMT10CQ7L0Y3 403 aaKnown RBP12.14□□□□□ -0.47
MSH6-201ENST00000234420 SPICE1Q8N0Z3 855 aa12.14□□□□□ -0.47
MSH6-201ENST00000234420 THRAP3Q9Y2W1 955 aaKnown RBP12.14□□□□□ -0.47
MSH6-201ENST00000234420 DKC1O60832 514 aaKnown RBP eCLIP12.14□□□□□ -0.47
MSH6-201ENST00000234420 FBXW10Q5XX13 1052 aa12.14□□□□□ -0.47
MSH6-201ENST00000234420 ZNF594Q96JF6 807 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms