RNA–Protein interactions for RNA: ENST00000231526.8

TRAPPC13-201, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TRAPPC13, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-201ENST00000231526 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.21□□□□□ -1.41
TRAPPC13-201ENST00000231526 DAGLAQ9Y4D2 1042 aa6.21□□□□□ -1.41
TRAPPC13-201ENST00000231526 TIAM2Q8IVF5 1701 aa6.21□□□□□ -1.42
TRAPPC13-201ENST00000231526 MAST2Q6P0Q8 1798 aa6.21□□□□□ -1.42
TRAPPC13-201ENST00000231526 CFAP99D6REC4 459 aa6.21□□□□□ -1.42
TRAPPC13-201ENST00000231526 UBE2Q2LH0YL09 131 aa6.21□□□□□ -1.42
TRAPPC13-201ENST00000231526 ECE2O60344 883 aa6.21□□□□□ -1.42
TRAPPC13-201ENST00000231526 ZBTB7AO95365 584 aa6.21□□□□□ -1.42
TRAPPC13-201ENST00000231526 IFNAR1P17181 557 aa6.21□□□□□ -1.42
TRAPPC13-201ENST00000231526 RBM5P52756 815 aaKnown RBP eCLIP6.21□□□□□ -1.42
TRAPPC13-201ENST00000231526 AKAP17AQ02040 695 aaKnown RBP6.21□□□□□ -1.42
TRAPPC13-201ENST00000231526 PHLDB3Q6NSJ2 640 aa6.21□□□□□ -1.42
TRAPPC13-201ENST00000231526 NUDT18Q6ZVK8 323 aa6.21□□□□□ -1.42
TRAPPC13-201ENST00000231526 TTLL6Q8N841 843 aa6.21□□□□□ -1.42
TRAPPC13-201ENST00000231526 GIPC2Q8TF65 315 aa6.21□□□□□ -1.42
TRAPPC13-201ENST00000231526 SLC16A10Q8TF71 515 aa6.21□□□□□ -1.42
TRAPPC13-201ENST00000231526 ISY1Q9ULR0 285 aaKnown RBP6.21□□□□□ -1.42
TRAPPC13-201ENST00000231526 COMMD10Q9Y6G5 202 aa6.21□□□□□ -1.42
TRAPPC13-201ENST00000231526 FLT1P17948 1338 aa6.21□□□□□ -1.42
TRAPPC13-201ENST00000231526 DUOX1Q9NRD9 1551 aa6.21□□□□□ -1.42
TRAPPC13-201ENST00000231526 FSD2A1L4K1 749 aa6.2□□□□□ -1.42
TRAPPC13-201ENST00000231526 GAKO14976 1311 aa6.2□□□□□ -1.42
TRAPPC13-201ENST00000231526 PPIP5K2O43314 1243 aa6.2□□□□□ -1.42
TRAPPC13-201ENST00000231526 LTBP1Q14766 1721 aa6.2□□□□□ -1.42
TRAPPC13-201ENST00000231526 ZNF710Q8N1W2 664 aa6.2□□□□□ -1.42
TRAPPC13-201ENST00000231526 ATL2Q8NHH9 583 aa6.2□□□□□ -1.42
TRAPPC13-201ENST00000231526 CTCFLQ8NI51 663 aaPredicted RBP6.2□□□□□ -1.42
TRAPPC13-201ENST00000231526 BICD2Q8TD16 824 aa6.2□□□□□ -1.42
TRAPPC13-201ENST00000231526 LEO1Q8WVC0 666 aaPredicted RBP6.2□□□□□ -1.42
TRAPPC13-201ENST00000231526 TEKT1Q969V4 418 aa6.2□□□□□ -1.42
TRAPPC13-201ENST00000231526 USP28Q96RU2 1077 aa6.2□□□□□ -1.42
TRAPPC13-201ENST00000231526 FTOQ9C0B1 505 aaKnown RBP eCLIP6.2□□□□□ -1.42
TRAPPC13-201ENST00000231526 GRPEL1Q9HAV7 217 aa6.2□□□□□ -1.42
TRAPPC13-201ENST00000231526 ELP1O95163 1332 aa6.2□□□□□ -1.42
TRAPPC13-201ENST00000231526 MRE11P49959 708 aa6.2□□□□□ -1.42
TRAPPC13-201ENST00000231526 RCAN1P53805 252 aa6.2□□□□□ -1.42
TRAPPC13-201ENST00000231526 TROAPQ12815 778 aa6.2□□□□□ -1.42
TRAPPC13-201ENST00000231526 SEMA3FQ13275 785 aa6.2□□□□□ -1.42
TRAPPC13-201ENST00000231526 PPP2R5BQ15173 497 aa6.2□□□□□ -1.42
TRAPPC13-201ENST00000231526 STRIP1Q5VSL9 837 aa6.2□□□□□ -1.42
TRAPPC13-201ENST00000231526 KRT40Q6A162 431 aa6.2□□□□□ -1.42
TRAPPC13-201ENST00000231526 C7orf43Q8WVR3 580 aa6.2□□□□□ -1.42
TRAPPC13-201ENST00000231526 WASF1Q92558 559 aa6.2□□□□□ -1.42
TRAPPC13-201ENST00000231526 ZNF396Q96N95 335 aaPredicted RBP6.2□□□□□ -1.42
TRAPPC13-201ENST00000231526 KAT14Q9H8E8 782 aa6.2□□□□□ -1.42
TRAPPC13-201ENST00000231526 NRBP1Q9UHY1 535 aa6.2□□□□□ -1.42
TRAPPC13-201ENST00000231526 TMA7Q9Y2S6 64 aaKnown RBP6.2□□□□□ -1.42
TRAPPC13-201ENST00000231526 CCDC189A1A4V9 331 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 USP17L3A6NCW0 530 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 USP17L4A6NCW7 530 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 DEXIO95424 95 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 FMNL1O95466 1100 aaPredicted RBP6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 XRCC6P12956 609 aaKnown RBP eCLIP6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 GUCY1A2P33402 732 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 ZNF445P59923 1031 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 MTMR3Q13615 1198 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 USP17L1Q7RTZ2 530 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 CRACR2BQ8N4Y2 399 aaPredicted RBP6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 SUPT20HQ8NEM7 779 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 PTCD2Q8WV60 388 aaKnown RBP6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 PBXIP1Q96AQ6 731 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 USP40Q9NVE5 1235 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 ZMIZ1Q9ULJ6 1067 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 hCG_1642624A0A1W2PR95 340 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 STK10O94804 968 aaKnown RBP6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 CALM1P0DP23 149 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 CALM2P0DP24 149 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 CALM3P0DP25 149 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 DPEP1P16444 411 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 CRKP46108 304 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 ME1P48163 572 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 CDK8P49336 464 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 KIF23Q02241 960 aaPredicted RBP6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 KIAA2012Q0VF49 1180 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 NR6A1Q15406 480 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 SAFBQ15424 915 aaKnown RBP eCLIP6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 CCDC93Q567U6 631 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 CCDC183Q5T5S1 534 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 BRAPQ7Z569 592 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 PNMA1Q8ND90 353 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 PIBF1Q8WXW3 757 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 PANK2Q9BZ23 570 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 RBM28Q9NW13 759 aaKnown RBP6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 MYH1P12882 1939 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 SCN9AQ15858 1988 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 MYH6P13533 1939 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 CFAP69A5D8W1 941 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 KIF28PB7ZC32 967 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 DDAH1O94760 285 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 PLEKHA8P1O95397 391 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 XBP1P17861 261 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 RASA1P20936 1047 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 SCP2P22307 547 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 CACNB3P54284 484 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 TCP10Q12799 353 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 ARSIQ5FYB1 569 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 ATL3Q6DD88 541 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 RCSD1Q6JBY9 416 aa6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 APOBEC3HQ6NTF7 200 aaKnown RBP6.19□□□□□ -1.42
TRAPPC13-201ENST00000231526 LRSAM1Q6UWE0 723 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms