RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 RGL2O15211 777 aa19.84■□□□□ 0.77
CDKN1B-201ENST00000228872 HERVK_113P62684 666 aa19.84■□□□□ 0.77
CDKN1B-201ENST00000228872 TMEM67Q5HYA8 995 aa19.84■□□□□ 0.77
CDKN1B-201ENST00000228872 JAKMIP2Q96AA8 810 aa19.84■□□□□ 0.77
CDKN1B-201ENST00000228872 AATFQ9NY61 560 aaKnown RBP eCLIP19.84■□□□□ 0.77
CDKN1B-201ENST00000228872 DONSONQ9NYP3 566 aa19.84■□□□□ 0.77
CDKN1B-201ENST00000228872 CEP126Q9P2H0 1117 aa19.84■□□□□ 0.77
CDKN1B-201ENST00000228872 SAMM50Q9Y512 469 aa19.84■□□□□ 0.77
CDKN1B-201ENST00000228872 GOLGA8KD6RF30 607 aa19.83■□□□□ 0.77
CDKN1B-201ENST00000228872 CSF1RP07333 972 aa19.83■□□□□ 0.77
CDKN1B-201ENST00000228872 CAGE1Q8TC20 777 aa19.83■□□□□ 0.77
CDKN1B-201ENST00000228872 XAGE2Q96GT9 111 aa19.83■□□□□ 0.77
CDKN1B-201ENST00000228872 TFR2Q9UP52 801 aa19.83■□□□□ 0.77
CDKN1B-201ENST00000228872 MYO5AQ9Y4I1 1855 aaKnown RBP19.83■□□□□ 0.77
CDKN1B-201ENST00000228872 PDE2AO00408 941 aaPredicted RBP19.83■□□□□ 0.76
CDKN1B-201ENST00000228872 IFNAR1P17181 557 aa19.83■□□□□ 0.76
CDKN1B-201ENST00000228872 CCDC122Q5T0U0 273 aa19.83■□□□□ 0.76
CDKN1B-201ENST00000228872 EPSTI1Q96J88 318 aa19.83■□□□□ 0.76
CDKN1B-201ENST00000228872 CAPN7Q9Y6W3 813 aa19.83■□□□□ 0.76
CDKN1B-201ENST00000228872 ATXN2Q99700 1313 aaKnown RBP19.82■□□□□ 0.76
CDKN1B-201ENST00000228872 FNTAP49354 379 aa19.82■□□□□ 0.76
CDKN1B-201ENST00000228872 SPAG1Q07617 926 aa19.82■□□□□ 0.76
CDKN1B-201ENST00000228872 ZNF772Q68DY9 489 aaPredicted RBP19.82■□□□□ 0.76
CDKN1B-201ENST00000228872 TTC19Q6DKK2 380 aaPredicted RBP19.82■□□□□ 0.76
CDKN1B-201ENST00000228872 PI16Q6UXB8 463 aa19.82■□□□□ 0.76
CDKN1B-201ENST00000228872 SND1Q7KZF4 910 aaKnown RBP eCLIP19.82■□□□□ 0.76
CDKN1B-201ENST00000228872 SYNE4Q8N205 404 aa19.82■□□□□ 0.76
CDKN1B-201ENST00000228872 SLC12A7Q9Y666 1083 aa19.82■□□□□ 0.76
CDKN1B-201ENST00000228872 C2orf54Q08AI8 447 aa19.81■□□□□ 0.76
CDKN1B-201ENST00000228872 ANKRD18AQ8IVF6 992 aa19.81■□□□□ 0.76
CDKN1B-201ENST00000228872 GNL3LQ9NVN8 582 aaKnown RBP19.81■□□□□ 0.76
CDKN1B-201ENST00000228872 CCNL1Q9UK58 526 aaPredicted RBP19.81■□□□□ 0.76
CDKN1B-201ENST00000228872 ZNF185O15231 689 aa19.81■□□□□ 0.76
CDKN1B-201ENST00000228872 PARP10Q53GL7 1025 aa19.81■□□□□ 0.76
CDKN1B-201ENST00000228872 OXER1Q8TDS5 423 aa19.81■□□□□ 0.76
CDKN1B-201ENST00000228872 CABS1Q96KC9 395 aa19.81■□□□□ 0.76
CDKN1B-201ENST00000228872 TRMT112Q9UI30 125 aaKnown RBP19.81■□□□□ 0.76
CDKN1B-201ENST00000228872 SKOR1P84550 965 aa19.8■□□□□ 0.76
CDKN1B-201ENST00000228872 TTF1Q15361 905 aaPredicted RBP19.8■□□□□ 0.76
CDKN1B-201ENST00000228872 TCP11X2Q5H9J9 407 aa19.8■□□□□ 0.76
CDKN1B-201ENST00000228872 CLEC4GQ6UXB4 293 aa19.8■□□□□ 0.76
CDKN1B-201ENST00000228872 AMOTL1Q8IY63 956 aa19.8■□□□□ 0.76
CDKN1B-201ENST00000228872 EHBP1Q8NDI1 1231 aa19.8■□□□□ 0.76
CDKN1B-201ENST00000228872 OR8K1Q8NGG5 319 aa19.8■□□□□ 0.76
CDKN1B-201ENST00000228872 RRP36Q96EU6 259 aaKnown RBP19.8■□□□□ 0.76
CDKN1B-201ENST00000228872 FBXO3Q9UK99 471 aa19.8■□□□□ 0.76
CDKN1B-201ENST00000228872 KCNJ18B7U540 433 aa19.8■□□□□ 0.76
CDKN1B-201ENST00000228872 KCNJ12Q14500 433 aa19.8■□□□□ 0.76
CDKN1B-201ENST00000228872 FAM196AQ6ZSG2 479 aa19.8■□□□□ 0.76
CDKN1B-201ENST00000228872 KRT27Q7Z3Y8 459 aa19.8■□□□□ 0.76
CDKN1B-201ENST00000228872 CABP5Q9NP86 173 aa19.8■□□□□ 0.76
CDKN1B-201ENST00000228872 A1CFQ9NQ94 594 aaKnown RBP19.8■□□□□ 0.76
CDKN1B-201ENST00000228872 ZNF652Q9Y2D9 606 aa19.8■□□□□ 0.76
CDKN1B-201ENST00000228872 TTC26A0AVF1 554 aa19.79■□□□□ 0.76
CDKN1B-201ENST00000228872 MYO1FO00160 1098 aa19.79■□□□□ 0.76
CDKN1B-201ENST00000228872 LIFRP42702 1097 aa19.79■□□□□ 0.76
CDKN1B-201ENST00000228872 SETQ01105 290 aaPredicted RBP19.79■□□□□ 0.76
CDKN1B-201ENST00000228872 ZNF662Q6ZS27 426 aa19.79■□□□□ 0.76
CDKN1B-201ENST00000228872 B4GALNT4Q76KP1 1039 aa19.79■□□□□ 0.76
CDKN1B-201ENST00000228872 RPAINQ86UA6 219 aa19.79■□□□□ 0.76
CDKN1B-201ENST00000228872 SYMPKQ92797 1274 aaKnown RBP19.79■□□□□ 0.76
CDKN1B-201ENST00000228872 RWDD2AQ9UIY3 292 aa19.79■□□□□ 0.76
CDKN1B-201ENST00000228872 OPA1O60313 960 aa19.79■□□□□ 0.76
CDKN1B-201ENST00000228872 RPS6KA4O75676 772 aa19.79■□□□□ 0.76
CDKN1B-201ENST00000228872 FSBPO95073 299 aa19.79■□□□□ 0.76
CDKN1B-201ENST00000228872 APPP05067 770 aa19.79■□□□□ 0.76
CDKN1B-201ENST00000228872 KCNQ4P56696 695 aa19.79■□□□□ 0.76
CDKN1B-201ENST00000228872 UBXN1Q04323 297 aa19.79■□□□□ 0.76
CDKN1B-201ENST00000228872 IFIT5Q13325 482 aaKnown RBP19.79■□□□□ 0.76
CDKN1B-201ENST00000228872 TRIM22Q8IYM9 498 aa19.79■□□□□ 0.76
CDKN1B-201ENST00000228872 INCENPQ9NQS7 918 aa19.79■□□□□ 0.76
CDKN1B-201ENST00000228872 IRS4O14654 1257 aaPredicted RBP19.79■□□□□ 0.76
CDKN1B-201ENST00000228872 SF3B2Q13435 895 aaKnown RBP19.79■□□□□ 0.76
CDKN1B-201ENST00000228872 RRAGBQ5VZM2 374 aa19.79■□□□□ 0.76
CDKN1B-201ENST00000228872 IQCEQ6IPM2 695 aa19.79■□□□□ 0.76
CDKN1B-201ENST00000228872 AIDAQ96BJ3 306 aa19.79■□□□□ 0.76
CDKN1B-201ENST00000228872 DNAJC7Q99615 494 aa19.79■□□□□ 0.76
CDKN1B-201ENST00000228872 HINFPQ9BQA5 517 aa19.79■□□□□ 0.76
CDKN1B-201ENST00000228872 SUFUQ9UMX1 484 aa19.79■□□□□ 0.76
CDKN1B-201ENST00000228872 NDUFAB1O14561 156 aa19.78■□□□□ 0.76
CDKN1B-201ENST00000228872 IFIT3O14879 490 aaKnown RBP19.78■□□□□ 0.76
CDKN1B-201ENST00000228872 KIF1CO43896 1103 aaKnown RBP19.78■□□□□ 0.76
CDKN1B-201ENST00000228872 PDE8AO60658 829 aa19.78■□□□□ 0.76
CDKN1B-201ENST00000228872 EPB41P11171 864 aaKnown RBP19.78■□□□□ 0.76
CDKN1B-201ENST00000228872 ADD2P35612 726 aa19.78■□□□□ 0.76
CDKN1B-201ENST00000228872 CTSWP56202 376 aa19.78■□□□□ 0.76
CDKN1B-201ENST00000228872 DDR1Q08345 913 aa19.78■□□□□ 0.76
CDKN1B-201ENST00000228872 TTMPQ5BVD1 217 aa19.78■□□□□ 0.76
CDKN1B-201ENST00000228872 CCDC70Q6NSX1 233 aa19.78■□□□□ 0.76
CDKN1B-201ENST00000228872 KIAA1328Q86T90 577 aa19.78■□□□□ 0.76
CDKN1B-201ENST00000228872 ABCC12Q96J65 1359 aa19.78■□□□□ 0.76
CDKN1B-201ENST00000228872 ANO9A1A5B4 782 aa19.78■□□□□ 0.76
CDKN1B-201ENST00000228872 KIAA0754O94854 1291 aa19.78■□□□□ 0.76
CDKN1B-201ENST00000228872 KRT83P78385 493 aa19.78■□□□□ 0.76
CDKN1B-201ENST00000228872 SUSD4Q5VX71 490 aa19.78■□□□□ 0.76
CDKN1B-201ENST00000228872 WDR59Q6PJI9 974 aa19.78■□□□□ 0.76
CDKN1B-201ENST00000228872 MMGT1Q8N4V1 131 aa19.78■□□□□ 0.76
CDKN1B-201ENST00000228872 OTUD6BQ8N6M0 293 aa19.78■□□□□ 0.76
CDKN1B-201ENST00000228872 ARL8AQ96BM9 186 aa19.78■□□□□ 0.76
CDKN1B-201ENST00000228872 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms