RNA–Protein interactions for RNA: ENST00000227266.9

CTSC-201, Transcript of cathepsin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSC, Length 1,921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-201ENST00000227266 ADGRF4Q8IZF3 695 aa12.88□□□□□ -0.35
CTSC-201ENST00000227266 FAM184AQ8NB25 1140 aa12.88□□□□□ -0.35
CTSC-201ENST00000227266 CHURC1Q8WUH1 139 aa12.88□□□□□ -0.35
CTSC-201ENST00000227266 KIFC2Q96AC6 838 aa12.88□□□□□ -0.35
CTSC-201ENST00000227266 SPZ1Q9BXG8 430 aa12.88□□□□□ -0.35
CTSC-201ENST00000227266 FEM1BQ9UK73 627 aa12.88□□□□□ -0.35
CTSC-201ENST00000227266 MYH4Q9Y623 1939 aa12.88□□□□□ -0.35
CTSC-201ENST00000227266 ZBTB48P10074 688 aaPredicted RBP12.88□□□□□ -0.35
CTSC-201ENST00000227266 FDPSP14324 419 aaKnown RBP12.88□□□□□ -0.35
CTSC-201ENST00000227266 GTF2A2P52657 109 aa12.88□□□□□ -0.35
CTSC-201ENST00000227266 FOSBP53539 338 aa12.88□□□□□ -0.35
CTSC-201ENST00000227266 PROCA1Q8NCQ7 364 aaPredicted RBP12.88□□□□□ -0.35
CTSC-201ENST00000227266 RRP36Q96EU6 259 aaKnown RBP12.88□□□□□ -0.35
CTSC-201ENST00000227266 PIGSQ96S52 555 aa12.88□□□□□ -0.35
CTSC-201ENST00000227266 RNF26Q9BY78 433 aaPredicted RBP12.88□□□□□ -0.35
CTSC-201ENST00000227266 CETPP11597 493 aa12.87□□□□□ -0.35
CTSC-201ENST00000227266 SMARCA1P28370 1054 aa12.87□□□□□ -0.35
CTSC-201ENST00000227266 APLP1P51693 650 aa12.87□□□□□ -0.35
CTSC-201ENST00000227266 SNAP25P60880 206 aa12.87□□□□□ -0.35
CTSC-201ENST00000227266 GSE1Q14687 1217 aa12.87□□□□□ -0.35
CTSC-201ENST00000227266 BTNL9Q6UXG8 535 aa12.87□□□□□ -0.35
CTSC-201ENST00000227266 FASTKD5Q7L8L6 764 aaKnown RBP12.87□□□□□ -0.35
CTSC-201ENST00000227266 FAM160B2Q86V87 743 aa12.87□□□□□ -0.35
CTSC-201ENST00000227266 SLF1Q9BQI6 1058 aa12.87□□□□□ -0.35
CTSC-201ENST00000227266 RIOX1Q9H6W3 641 aa12.87□□□□□ -0.35
CTSC-201ENST00000227266 JMJD4Q9H9V9 463 aa12.87□□□□□ -0.35
CTSC-201ENST00000227266 SEC63Q9UGP8 760 aaKnown RBP12.87□□□□□ -0.35
CTSC-201ENST00000227266 PRR12Q9ULL5 1215 aa12.87□□□□□ -0.35
CTSC-201ENST00000227266 TRPM7Q96QT4 1865 aa12.86□□□□□ -0.35
CTSC-201ENST00000227266 CCL15-CCL14A0A0B4J2E2 113 aa12.86□□□□□ -0.35
CTSC-201ENST00000227266 USP17L15C9J2P7 530 aa12.86□□□□□ -0.35
CTSC-201ENST00000227266 USP17L13C9JLJ4 530 aa12.86□□□□□ -0.35
CTSC-201ENST00000227266 USP17L11C9JVI0 530 aa12.86□□□□□ -0.35
CTSC-201ENST00000227266 USP17L18D6R9N7 530 aa12.86□□□□□ -0.35
CTSC-201ENST00000227266 USP17L22D6RA61 530 aa12.86□□□□□ -0.35
CTSC-201ENST00000227266 USP17L17D6RBQ6 530 aa12.86□□□□□ -0.35
CTSC-201ENST00000227266 USP17L19D6RCP7 530 aa12.86□□□□□ -0.35
CTSC-201ENST00000227266 USP17L20D6RJB6 530 aa12.86□□□□□ -0.35
CTSC-201ENST00000227266 PRPF3O43395 683 aaKnown RBP12.86□□□□□ -0.35
CTSC-201ENST00000227266 USP17L24Q0WX57 530 aa12.86□□□□□ -0.35
CTSC-201ENST00000227266 MOGSQ13724 837 aa12.86□□□□□ -0.35
CTSC-201ENST00000227266 CCL15Q16663 113 aa12.86□□□□□ -0.35
CTSC-201ENST00000227266 MS4A4AQ96JQ5 239 aa12.86□□□□□ -0.35
CTSC-201ENST00000227266 AIFM3Q96NN9 605 aa12.86□□□□□ -0.35
CTSC-201ENST00000227266 CREBZFQ9NS37 354 aa12.86□□□□□ -0.35
CTSC-201ENST00000227266 PLA2G6O60733 806 aa12.86□□□□□ -0.35
CTSC-201ENST00000227266 DEXIO95424 95 aa12.86□□□□□ -0.35
CTSC-201ENST00000227266 SLC10A3P09131 477 aa12.86□□□□□ -0.35
CTSC-201ENST00000227266 CATSPERGQ6ZRH7 1159 aa12.86□□□□□ -0.35
CTSC-201ENST00000227266 PRPF38AQ8NAV1 312 aaKnown RBP12.86□□□□□ -0.35
CTSC-201ENST00000227266 BRI3BPQ8WY22 251 aa12.86□□□□□ -0.35
CTSC-201ENST00000227266 CCDC102AQ96A19 550 aa12.86□□□□□ -0.35
CTSC-201ENST00000227266 ALG1Q9BT22 464 aa12.86□□□□□ -0.35
CTSC-201ENST00000227266 CWC22Q9HCG8 908 aaKnown RBP12.86□□□□□ -0.35
CTSC-201ENST00000227266 AGTPBP1Q9UPW5 1226 aa12.86□□□□□ -0.35
CTSC-201ENST00000227266 KIF3AQ9Y496 699 aa12.86□□□□□ -0.35
CTSC-201ENST00000227266 STK36Q9NRP7 1315 aa12.86□□□□□ -0.35
CTSC-201ENST00000227266 PHIPQ8WWQ0 1821 aa12.85□□□□□ -0.35
CTSC-201ENST00000227266 IRX3P78415 501 aaPredicted RBP12.85□□□□□ -0.35
CTSC-201ENST00000227266 PKN1Q16512 942 aa12.85□□□□□ -0.35
CTSC-201ENST00000227266 CDC37Q16543 378 aaPredicted RBP12.85□□□□□ -0.35
CTSC-201ENST00000227266 LARP1BQ659C4 914 aaKnown RBP12.85□□□□□ -0.35
CTSC-201ENST00000227266 CYP4F22Q6NT55 531 aa12.85□□□□□ -0.35
CTSC-201ENST00000227266 HEATR3Q7Z4Q2 680 aa12.85□□□□□ -0.35
CTSC-201ENST00000227266 WASF1Q92558 559 aa12.85□□□□□ -0.35
CTSC-201ENST00000227266 GPKOWQ92917 476 aaPredicted RBP eCLIP12.85□□□□□ -0.35
CTSC-201ENST00000227266 HHIPL1Q96JK4 782 aa12.85□□□□□ -0.35
CTSC-201ENST00000227266 RBM27Q9P2N5 1060 aaKnown RBP12.85□□□□□ -0.35
CTSC-201ENST00000227266 PPP1R9AQ9ULJ8 1098 aa12.85□□□□□ -0.35
CTSC-201ENST00000227266 ZBTB5O15062 677 aa12.84□□□□□ -0.35
CTSC-201ENST00000227266 SCG2P13521 617 aa12.84□□□□□ -0.35
CTSC-201ENST00000227266 COG2Q14746 738 aa12.84□□□□□ -0.35
CTSC-201ENST00000227266 PFKFB3Q16875 520 aaPredicted RBP12.84□□□□□ -0.35
CTSC-201ENST00000227266 QRICH1Q2TAL8 776 aa12.84□□□□□ -0.35
CTSC-201ENST00000227266 GPAT2Q6NUI2 795 aa12.84□□□□□ -0.35
CTSC-201ENST00000227266 CCDC174Q6PII3 467 aa12.84□□□□□ -0.35
CTSC-201ENST00000227266 ATG4CQ96DT6 458 aa12.84□□□□□ -0.35
CTSC-201ENST00000227266 GJB4Q9NTQ9 266 aa12.84□□□□□ -0.35
CTSC-201ENST00000227266 PNMA6FA0A0J9YX94 578 aa12.84□□□□□ -0.35
CTSC-201ENST00000227266 FAM155AB1AL88 458 aaPredicted RBP12.84□□□□□ -0.35
CTSC-201ENST00000227266 HOXA7P31268 230 aaPredicted RBP12.84□□□□□ -0.35
CTSC-201ENST00000227266 PABPC4Q13310 644 aaKnown RBP eCLIP12.84□□□□□ -0.352e-14■■■■■ 33.2
CTSC-201ENST00000227266 OTUD7BQ6GQQ9 843 aa12.84□□□□□ -0.35
CTSC-201ENST00000227266 MTMR8Q96EF0 704 aa12.84□□□□□ -0.35
CTSC-201ENST00000227266 C8orf76Q96K31 380 aa12.84□□□□□ -0.35
CTSC-201ENST00000227266 ASCC2Q9H1I8 757 aaPredicted RBP12.84□□□□□ -0.35
CTSC-201ENST00000227266 HOXC10Q9NYD6 342 aa12.84□□□□□ -0.35
CTSC-201ENST00000227266 CHMP5Q9NZZ3 219 aa12.84□□□□□ -0.35
CTSC-201ENST00000227266 CTDP1Q9Y5B0 961 aaPredicted RBP12.84□□□□□ -0.35
CTSC-201ENST00000227266 MANSC4A6NHS7 340 aaPredicted RBP12.83□□□□□ -0.36
CTSC-201ENST00000227266 BTBD19C9JJ37 291 aa12.83□□□□□ -0.36
CTSC-201ENST00000227266 PDHXO00330 501 aa12.83□□□□□ -0.36
CTSC-201ENST00000227266 PPP1R11O60927 126 aaPredicted RBP12.83□□□□□ -0.36
CTSC-201ENST00000227266 PDCP20941 246 aa12.83□□□□□ -0.36
CTSC-201ENST00000227266 SYT1P21579 422 aa12.83□□□□□ -0.36
CTSC-201ENST00000227266 DSG3P32926 999 aa12.83□□□□□ -0.36
CTSC-201ENST00000227266 GUCY1B3Q02153 619 aa12.83□□□□□ -0.36
CTSC-201ENST00000227266 DEFB115Q30KQ5 88 aa12.83□□□□□ -0.36
CTSC-201ENST00000227266 WWC2Q6AWC2 1192 aa12.83□□□□□ -0.36
CTSC-201ENST00000227266 P2RX7Q99572 595 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms