RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 EARS2Q5JPH6 523 aaKnown RBP20.8■□□□□ 0.92
VIM-201ENST00000224237 AXDND1Q5T1B0 1012 aaPredicted RBP20.8■□□□□ 0.92
VIM-201ENST00000224237 SLFN13Q68D06 897 aa20.8■□□□□ 0.92
VIM-201ENST00000224237 GOLPH3LQ9H4A5 285 aa20.8■□□□□ 0.92
VIM-201ENST00000224237 DDNO94850 711 aaPredicted RBP20.79■□□□□ 0.92
VIM-201ENST00000224237 EPS15P42566 896 aa20.79■□□□□ 0.92
VIM-201ENST00000224237 TRAPPC10P48553 1259 aa20.79■□□□□ 0.92
VIM-201ENST00000224237 ZMYND12Q9H0C1 365 aa20.79■□□□□ 0.92
VIM-201ENST00000224237 CLSTN2Q9H4D0 955 aa20.79■□□□□ 0.92
VIM-201ENST00000224237 ARHGEF10LQ9HCE6 1279 aa20.79■□□□□ 0.92
VIM-201ENST00000224237 ZBTB21Q9ULJ3 1066 aa20.79■□□□□ 0.92
VIM-201ENST00000224237 PCDHB6Q9Y5E3 794 aa20.79■□□□□ 0.92
VIM-201ENST00000224237 MORC2Q9Y6X9 1032 aaPredicted RBP20.79■□□□□ 0.92
VIM-201ENST00000224237 TRIM75PA6NK02 468 aa20.79■□□□□ 0.92
VIM-201ENST00000224237 KCTD1Q719H9 257 aa20.79■□□□□ 0.92
VIM-201ENST00000224237 GMCL1Q96IK5 515 aa20.79■□□□□ 0.92
VIM-201ENST00000224237 TEPSINQ96N21 525 aa20.79■□□□□ 0.92
VIM-201ENST00000224237 TNMDQ9H2S6 317 aa20.79■□□□□ 0.92
VIM-201ENST00000224237 FAM205CA6NFA0 338 aa20.78■□□□□ 0.92
VIM-201ENST00000224237 F5H6K3 240 aa20.78■□□□□ 0.92
VIM-201ENST00000224237 RAD21O60216 631 aa20.78■□□□□ 0.92
VIM-201ENST00000224237 BMP15O95972 392 aa20.78■□□□□ 0.92
VIM-201ENST00000224237 CMA1P23946 247 aa20.78■□□□□ 0.92
VIM-201ENST00000224237 GNA11P29992 359 aa20.78■□□□□ 0.92
VIM-201ENST00000224237 KLRC3Q07444 240 aa20.78■□□□□ 0.92
VIM-201ENST00000224237 SNW1Q13573 536 aaKnown RBP20.78■□□□□ 0.92
VIM-201ENST00000224237 MAP3K11Q16584 847 aa20.78■□□□□ 0.92
VIM-201ENST00000224237 C9orf131Q5VYM1 1079 aa20.78■□□□□ 0.92
VIM-201ENST00000224237 PIK3AP1Q6ZUJ8 805 aa20.78■□□□□ 0.92
VIM-201ENST00000224237 ADGRF4Q8IZF3 695 aa20.78■□□□□ 0.92
VIM-201ENST00000224237 ENGASEQ8NFI3 743 aa20.78■□□□□ 0.92
VIM-201ENST00000224237 TSPY26PQ9H489 355 aa20.78■□□□□ 0.92
VIM-201ENST00000224237 JMJD4Q9H9V9 463 aa20.78■□□□□ 0.92
VIM-201ENST00000224237 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.78■□□□□ 0.92
VIM-201ENST00000224237 ESYT2A0FGR8 921 aa20.77■□□□□ 0.92
VIM-201ENST00000224237 M0R2N6 131 aa20.77■□□□□ 0.92
VIM-201ENST00000224237 KINO60870 393 aaKnown RBP20.77■□□□□ 0.92
VIM-201ENST00000224237 CUTAO60888 179 aa20.77■□□□□ 0.92
VIM-201ENST00000224237 TTBK2Q6IQ55 1244 aa20.77■□□□□ 0.92
VIM-201ENST00000224237 KRI1Q8N9T8 703 aaKnown RBP20.77■□□□□ 0.92
VIM-201ENST00000224237 C6orf50Q9HD87 102 aa20.77■□□□□ 0.92
VIM-201ENST00000224237 PNMA6FA0A0J9YX94 578 aa20.77■□□□□ 0.92
VIM-201ENST00000224237 ATP2B1P20020 1258 aa20.77■□□□□ 0.92
VIM-201ENST00000224237 CAP2P40123 477 aa20.77■□□□□ 0.92
VIM-201ENST00000224237 MTMR8Q96EF0 704 aa20.77■□□□□ 0.92
VIM-201ENST00000224237 A0A1B0GVL5 298 aa20.76■□□□□ 0.91
VIM-201ENST00000224237 SOCS7O14512 581 aa20.76■□□□□ 0.91
VIM-201ENST00000224237 NDUFB10O96000 172 aa20.76■□□□□ 0.91
VIM-201ENST00000224237 HIRAP54198 1017 aaPredicted RBP20.76■□□□□ 0.91
VIM-201ENST00000224237 CAMK4Q16566 473 aa20.76■□□□□ 0.91
VIM-201ENST00000224237 TTC38Q5R3I4 469 aa20.76■□□□□ 0.91
VIM-201ENST00000224237 ANGEL2Q5VTE6 544 aaKnown RBP20.76■□□□□ 0.91
VIM-201ENST00000224237 PPP1R18Q6NYC8 613 aa20.76■□□□□ 0.91
VIM-201ENST00000224237 RBM43Q6ZSC3 357 aaKnown RBP20.76■□□□□ 0.91
VIM-201ENST00000224237 DEFB129Q9H1M3 183 aa20.76■□□□□ 0.91
VIM-201ENST00000224237 CCDC194A0A1B0GVG4 234 aa20.75■□□□□ 0.91
VIM-201ENST00000224237 SMCO2A6NFE2 343 aa20.75■□□□□ 0.91
VIM-201ENST00000224237 ZBTB5O15062 677 aa20.75■□□□□ 0.91
VIM-201ENST00000224237 CTAGE5O15320 804 aa20.75■□□□□ 0.91
VIM-201ENST00000224237 XRCC6P12956 609 aaKnown RBP eCLIP20.75■□□□□ 0.91
VIM-201ENST00000224237 NOM1Q5C9Z4 860 aaKnown RBP20.75■□□□□ 0.91
VIM-201ENST00000224237 FMR1NBQ8N0W7 255 aaPredicted RBP20.75■□□□□ 0.91
VIM-201ENST00000224237 PCDHA6Q9UN73 950 aa20.75■□□□□ 0.91
VIM-201ENST00000224237 TMX2Q9Y320 296 aa20.75■□□□□ 0.91
VIM-201ENST00000224237 PCDHA8Q9Y5H6 950 aa20.75■□□□□ 0.91
VIM-201ENST00000224237 A0A1W2PRG0 241 aa20.75■□□□□ 0.91
VIM-201ENST00000224237 ADAMTS3O15072 1205 aa20.75■□□□□ 0.91
VIM-201ENST00000224237 ASNSP08243 561 aa20.75■□□□□ 0.91
VIM-201ENST00000224237 PTPREP23469 700 aa20.75■□□□□ 0.91
VIM-201ENST00000224237 SLC16A2P36021 539 aa20.75■□□□□ 0.91
VIM-201ENST00000224237 NDUFA8P51970 172 aa20.75■□□□□ 0.91
VIM-201ENST00000224237 APOBEC3FQ8IUX4 373 aaKnown RBP20.75■□□□□ 0.91
VIM-201ENST00000224237 GOPCQ9HD26 462 aa20.75■□□□□ 0.91
VIM-201ENST00000224237 PRAMEF18Q5VWM3 479 aa20.74■□□□□ 0.91
VIM-201ENST00000224237 SH2D4AQ9H788 454 aa20.74■□□□□ 0.91
VIM-201ENST00000224237 GGA3Q9NZ52 723 aa20.74■□□□□ 0.91
VIM-201ENST00000224237 FBXO2Q9UK22 296 aaPredicted RBP20.74■□□□□ 0.91
VIM-201ENST00000224237 SRPRBQ9Y5M8 271 aaKnown RBP20.74■□□□□ 0.91
VIM-201ENST00000224237 USP17L10C9JJH3 530 aa20.73■□□□□ 0.91
VIM-201ENST00000224237 BMP3P12645 472 aa20.73■□□□□ 0.91
VIM-201ENST00000224237 PFKFB1P16118 471 aa20.73■□□□□ 0.91
VIM-201ENST00000224237 NBPF12Q5TAG4 269 aaPredicted RBP20.73■□□□□ 0.91
VIM-201ENST00000224237 RESP18Q5W5W9 173 aa20.73■□□□□ 0.91
VIM-201ENST00000224237 SHC4Q6S5L8 630 aa20.73■□□□□ 0.91
VIM-201ENST00000224237 RASGRP4Q8TDF6 673 aa20.73■□□□□ 0.91
VIM-201ENST00000224237 FUCA2Q9BTY2 467 aa20.73■□□□□ 0.91
VIM-201ENST00000224237 RBSNQ9H1K0 784 aa20.73■□□□□ 0.91
VIM-201ENST00000224237 ATAD5Q96QE3 1844 aa20.73■□□□□ 0.91
VIM-201ENST00000224237 FAM237AA0A1B0GTK4 181 aa20.73■□□□□ 0.91
VIM-201ENST00000224237 CCDC192P0DO97 292 aa20.73■□□□□ 0.91
VIM-201ENST00000224237 ECE1P42892 770 aa20.73■□□□□ 0.91
VIM-201ENST00000224237 KRT25Q7Z3Z0 450 aa20.73■□□□□ 0.91
VIM-201ENST00000224237 CCDC84Q86UT8 332 aaPredicted RBP20.73■□□□□ 0.91
VIM-201ENST00000224237 ZNF579Q8NAF0 562 aaKnown RBP20.73■□□□□ 0.91
VIM-201ENST00000224237 ACER1Q8TDN7 264 aa20.73■□□□□ 0.91
VIM-201ENST00000224237 CLIC6Q96NY7 704 aa20.73■□□□□ 0.91
VIM-201ENST00000224237 GINM1Q9NU53 330 aa20.73■□□□□ 0.91
VIM-201ENST00000224237 PHF20L1A8MW92 1017 aa20.72■□□□□ 0.91
VIM-201ENST00000224237 GPR162Q16538 588 aa20.72■□□□□ 0.91
VIM-201ENST00000224237 COA7Q96BR5 231 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms