RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 CAPN15O75808 1086 aa20.46■□□□□ 0.87
MRPL28-201ENST00000199706 ECM2O94769 699 aaPredicted RBP20.46■□□□□ 0.87
MRPL28-201ENST00000199706 ERCC3P19447 782 aa20.46■□□□□ 0.87
MRPL28-201ENST00000199706 MCCP23508 829 aa20.46■□□□□ 0.87
MRPL28-201ENST00000199706 STAT3P40763 770 aa20.46■□□□□ 0.87
MRPL28-201ENST00000199706 MAP2K5Q13163 448 aa20.46■□□□□ 0.87
MRPL28-201ENST00000199706 ENAHQ8N8S7 591 aaPredicted RBP20.46■□□□□ 0.87
MRPL28-201ENST00000199706 NCOA7Q8NI08 942 aa20.46■□□□□ 0.87
MRPL28-201ENST00000199706 SH3TC2Q8TF17 1288 aa20.46■□□□□ 0.87
MRPL28-201ENST00000199706 CWC22Q9HCG8 908 aaKnown RBP20.46■□□□□ 0.87
MRPL28-201ENST00000199706 TMEM232C9JQI7 657 aa20.45■□□□□ 0.86
MRPL28-201ENST00000199706 E7EWF7 191 aa20.45■□□□□ 0.86
MRPL28-201ENST00000199706 ZBED4O75132 1171 aa20.45■□□□□ 0.86
MRPL28-201ENST00000199706 PDHBP11177 359 aa20.45■□□□□ 0.86
MRPL28-201ENST00000199706 NECTIN1Q15223 517 aa20.45■□□□□ 0.86
MRPL28-201ENST00000199706 GPATCH4Q5T3I0 446 aaKnown RBP20.45■□□□□ 0.86
MRPL28-201ENST00000199706 RALYLQ86SE5 291 aaKnown RBP20.45■□□□□ 0.86
MRPL28-201ENST00000199706 ANO2Q9NQ90 1003 aa20.45■□□□□ 0.86
MRPL28-201ENST00000199706 PNMA2Q9UL42 364 aa20.45■□□□□ 0.86
MRPL28-201ENST00000199706 TNKSO95271 1327 aa20.45■□□□□ 0.86
MRPL28-201ENST00000199706 ZNFX1Q9P2E3 1918 aaKnown RBP20.45■□□□□ 0.86
MRPL28-201ENST00000199706 INHAP05111 366 aa20.44■□□□□ 0.86
MRPL28-201ENST00000199706 SEC23AQ15436 765 aa20.44■□□□□ 0.86
MRPL28-201ENST00000199706 KIFC2Q96AC6 838 aa20.44■□□□□ 0.86
MRPL28-201ENST00000199706 TMEM106CQ9BVX2 250 aa20.44■□□□□ 0.86
MRPL28-201ENST00000199706 EPB41L2O43491 1005 aaKnown RBP20.43■□□□□ 0.86
MRPL28-201ENST00000199706 IGHA2P01877 340 aa20.43■□□□□ 0.86
MRPL28-201ENST00000199706 ELNP15502 786 aa20.43■□□□□ 0.86
MRPL28-201ENST00000199706 ZNF543Q08ER8 600 aa20.43■□□□□ 0.86
MRPL28-201ENST00000199706 PLS1Q14651 629 aa20.43■□□□□ 0.86
MRPL28-201ENST00000199706 SART3Q15020 963 aaKnown RBP20.43■□□□□ 0.86
MRPL28-201ENST00000199706 MAP3K21Q5TCX8 1036 aa20.43■□□□□ 0.86
MRPL28-201ENST00000199706 RNF20Q5VTR2 975 aa20.43■□□□□ 0.86
MRPL28-201ENST00000199706 PNMA1Q8ND90 353 aa20.43■□□□□ 0.86
MRPL28-201ENST00000199706 SLC5A4Q9NY91 659 aa20.43■□□□□ 0.86
MRPL28-201ENST00000199706 FBXO40Q9UH90 709 aa20.43■□□□□ 0.86
MRPL28-201ENST00000199706 FCER1AP12319 257 aa20.42■□□□□ 0.86
MRPL28-201ENST00000199706 ZKSCAN1P17029 563 aaPredicted RBP20.42■□□□□ 0.86
MRPL28-201ENST00000199706 ADORA2AP29274 412 aa20.42■□□□□ 0.86
MRPL28-201ENST00000199706 CCDC96Q2M329 555 aa20.42■□□□□ 0.86
MRPL28-201ENST00000199706 WDR78Q5VTH9 848 aa20.42■□□□□ 0.86
MRPL28-201ENST00000199706 SNRNP48Q6IEG0 339 aaKnown RBP20.42■□□□□ 0.86
MRPL28-201ENST00000199706 STOX1Q6ZVD7 989 aa20.42■□□□□ 0.86
MRPL28-201ENST00000199706 KCTD1Q719H9 257 aa20.42■□□□□ 0.86
MRPL28-201ENST00000199706 NCAPG2Q86XI2 1143 aa20.42■□□□□ 0.86
MRPL28-201ENST00000199706 MB21D2Q8IYB1 491 aaPredicted RBP20.42■□□□□ 0.86
MRPL28-201ENST00000199706 TRIB2Q92519 343 aa20.42■□□□□ 0.86
MRPL28-201ENST00000199706 ZKSCAN3Q9BRR0 538 aa20.42■□□□□ 0.86
MRPL28-201ENST00000199706 KAT14Q9H8E8 782 aa20.42■□□□□ 0.86
MRPL28-201ENST00000199706 PRR12Q9ULL5 1215 aa20.42■□□□□ 0.86
MRPL28-201ENST00000199706 PLXNA1Q9UIW2 1896 aa20.41■□□□□ 0.86
MRPL28-201ENST00000199706 SLC27A2O14975 620 aa20.41■□□□□ 0.86
MRPL28-201ENST00000199706 GJB1P08034 283 aa20.41■□□□□ 0.86
MRPL28-201ENST00000199706 CYP2B6P20813 491 aa20.41■□□□□ 0.86
MRPL28-201ENST00000199706 SOX10P56693 466 aa20.41■□□□□ 0.86
MRPL28-201ENST00000199706 TKFCQ3LXA3 575 aa20.41■□□□□ 0.86
MRPL28-201ENST00000199706 TSGA10IPQ3SY00 556 aa20.41■□□□□ 0.86
MRPL28-201ENST00000199706 ASPRV1Q53RT3 343 aa20.41■□□□□ 0.86
MRPL28-201ENST00000199706 IFIT1BQ5T764 474 aaKnown RBP20.41■□□□□ 0.86
MRPL28-201ENST00000199706 OLFML2BQ68BL8 750 aa20.41■□□□□ 0.86
MRPL28-201ENST00000199706 CREB3L3Q68CJ9 461 aa20.41■□□□□ 0.86
MRPL28-201ENST00000199706 CYB5R4Q7L1T6 521 aa20.41■□□□□ 0.86
MRPL28-201ENST00000199706 CHST13Q8NET6 341 aa20.41■□□□□ 0.86
MRPL28-201ENST00000199706 RANBP17Q9H2T7 1088 aaKnown RBP20.41■□□□□ 0.86
MRPL28-201ENST00000199706 PAK6Q9NQU5 681 aaPredicted RBP20.41■□□□□ 0.86
MRPL28-201ENST00000199706 BIN2Q9UBW5 565 aaPredicted RBP20.41■□□□□ 0.86
MRPL28-201ENST00000199706 DIS3Q9Y2L1 958 aaKnown RBP20.41■□□□□ 0.86
MRPL28-201ENST00000199706 CTDP1Q9Y5B0 961 aaPredicted RBP20.41■□□□□ 0.86
MRPL28-201ENST00000199706 TAF6LQ9Y6J9 622 aa20.41■□□□□ 0.86
MRPL28-201ENST00000199706 ZNF536O15090 1300 aa20.4■□□□□ 0.86
MRPL28-201ENST00000199706 CCL5P13501 91 aa20.4■□□□□ 0.86
MRPL28-201ENST00000199706 IKQ13123 557 aaPredicted RBP20.4■□□□□ 0.86
MRPL28-201ENST00000199706 KCTD2Q14681 263 aa20.4■□□□□ 0.86
MRPL28-201ENST00000199706 SYDE2Q5VT97 1194 aa20.4■□□□□ 0.86
MRPL28-201ENST00000199706 SAMD1Q6SPF0 538 aaPredicted RBP20.4■□□□□ 0.86
MRPL28-201ENST00000199706 RPTORQ8N122 1335 aa20.39■□□□□ 0.85
MRPL28-201ENST00000199706 ERICH2A1L162 156 aa20.39■□□□□ 0.85
MRPL28-201ENST00000199706 REC8O95072 547 aa20.39■□□□□ 0.85
MRPL28-201ENST00000199706 RASGRP2Q7LDG7 609 aa20.39■□□□□ 0.85
MRPL28-201ENST00000199706 MMP19Q99542 508 aa20.39■□□□□ 0.85
MRPL28-201ENST00000199706 ISY1Q9ULR0 285 aaKnown RBP20.39■□□□□ 0.85
MRPL28-201ENST00000199706 WDR19Q8NEZ3 1342 aa20.38■□□□□ 0.85
MRPL28-201ENST00000199706 ICAM1P05362 532 aa20.38■□□□□ 0.85
MRPL28-201ENST00000199706 GJA8P48165 433 aa20.38■□□□□ 0.85
MRPL28-201ENST00000199706 MTFR1Q15390 333 aa20.38■□□□□ 0.85
MRPL28-201ENST00000199706 DPP9Q86TI2 863 aa20.38■□□□□ 0.85
MRPL28-201ENST00000199706 MSL3Q8N5Y2 521 aaKnown RBP20.38■□□□□ 0.85
MRPL28-201ENST00000199706 RNF208Q9H0X6 261 aa20.38■□□□□ 0.85
MRPL28-201ENST00000199706 MKI67P46013 3256 aaKnown RBP20.37■□□□□ 0.85
MRPL28-201ENST00000199706 DNAJC25-GNG10A0A024R161 153 aa20.37■□□□□ 0.85
MRPL28-201ENST00000199706 POTEFA5A3E0 1075 aa20.37■□□□□ 0.85
MRPL28-201ENST00000199706 TNRC18O15417 2968 aaPredicted RBP20.37■□□□□ 0.85
MRPL28-201ENST00000199706 MCM5P33992 734 aa20.37■□□□□ 0.85
MRPL28-201ENST00000199706 KRT32Q14532 448 aa20.37■□□□□ 0.85
MRPL28-201ENST00000199706 MFSD14CQ5VZR4 134 aa20.37■□□□□ 0.85
MRPL28-201ENST00000199706 CPXCR1Q8N123 301 aa20.37■□□□□ 0.85
MRPL28-201ENST00000199706 KCNB2Q92953 911 aa20.37■□□□□ 0.85
MRPL28-201ENST00000199706 TMEM87BQ96K49 555 aa20.37■□□□□ 0.85
MRPL28-201ENST00000199706 MAF1Q9H063 256 aa20.37■□□□□ 0.85
MRPL28-201ENST00000199706 UNC93B1Q9H1C4 597 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms