RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 Kcna1P16388 495 aa16.26■□□□□ 0.19
Ssr1-204ENSMUST00000225319 MarcksP26645 309 aaKnown RBP16.26■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Aco1P28271 889 aaKnown RBP16.26■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Gdf10P97737 476 aa16.26■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Lgr6Q3UVD5 967 aa16.26■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Kcna4Q61423 654 aa16.26■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Tas2r124Q7M718 309 aa16.26■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Snapc2Q91XA5 359 aa16.26■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Mettl16Q9CQG2 553 aaKnown RBP16.26■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Hic2Q9JLZ6 619 aaKnown RBP16.26■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Dock2Q8C3J5 1828 aa16.25■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Sycp2lA0A0M3U1B0 842 aa16.25■□□□□ 0.19
Ssr1-204ENSMUST00000225319 MthfslL7N466 203 aa16.25■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Api5O35841 504 aaKnown RBP16.25■□□□□ 0.19
Ssr1-204ENSMUST00000225319 PparaP23204 468 aa16.25■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Kcnd1Q03719 651 aa16.25■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Arhgef16Q3U5C8 713 aa16.25■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Tom1l2Q5SRX1 507 aa16.25■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Swap70Q6A028 585 aaKnown RBP16.25■□□□□ 0.19
Ssr1-204ENSMUST00000225319 CtifQ6PEE2 600 aaKnown RBP16.25■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Dlg1Q811D0 905 aaKnown RBP16.25■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Haus7Q8BKT8 364 aa16.25■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Gjd4Q8BSD4 364 aa16.25■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Serpina10Q8R121 448 aa16.25■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Kri1Q8VDQ9 704 aaKnown RBP16.25■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Trex1Q91XB0 314 aa16.25■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Tomm22Q9CPQ3 142 aa16.25■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Filip1Q9CS72 1211 aa16.25■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Cnpy2Q9QXT0 182 aa16.25■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Scn10aQ6QIY3 1958 aa16.24■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Gm43738A0A0G2JEA5 862 aa16.24■□□□□ 0.19
Ssr1-204ENSMUST00000225319 CfhP06909 1234 aa16.24■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Wnt7aP24383 349 aa16.24■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Irf6P97431 467 aa16.24■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Slc9a1Q61165 820 aa16.24■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Sez6lQ6P1D5 963 aa16.24■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Ms4a5Q810P8 197 aa16.24■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Trappc12Q8K2L8 797 aa16.24■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Hexim1Q8R409 356 aaKnown RBP16.24■□□□□ 0.19
Ssr1-204ENSMUST00000225319 GrapQ9CX99 217 aa16.24■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Calml3Q9D6P8 149 aa16.24■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Hip1rQ9JKY5 1068 aa16.24■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Txnrd2Q9JLT4 524 aa16.24■□□□□ 0.19
Ssr1-204ENSMUST00000225319 GdaQ9R111 454 aa16.24■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Cry2Q9R194 592 aa16.24■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Lekr1B2RVN1 116 aa16.23■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Clrn2B2RVW2 232 aa16.23■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Nova2D3YVV7 556 aaKnown RBP16.23■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Magea1O89006 320 aa16.23■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Magea5O89009 320 aa16.23■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Gna11P21278 359 aa16.23■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Gjb4Q02738 266 aa16.23■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Nom1Q3UFM5 854 aaKnown RBP16.23■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Ube2oQ6ZPJ3 1288 aa16.23■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Sass6Q80UK7 654 aa16.23■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Kctd3Q8BFX3 815 aa16.23■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Scfd2Q8BTY8 684 aa16.23■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Ccdc150Q8CDI7 1110 aa16.23■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Tmem60Q8K174 133 aa16.23■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Lman1lQ8VCD3 505 aa16.23■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Rnaseh2aQ9CWY8 301 aa16.23■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Acot3Q9QYR7 432 aa16.23■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Magea2Q9R2A2 320 aa16.23■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Homer1Q9Z2Y3 366 aa16.23■□□□□ 0.19
Ssr1-204ENSMUST00000225319 XdhQ00519 1335 aa16.23■□□□□ 0.19
Ssr1-204ENSMUST00000225319 SynrgQ5SV85 1306 aa16.23■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Gucy1a2F8VQK3 730 aa16.23■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Gpatch11Q3UFS4 262 aa16.23■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Ttbk2Q3UVR3 1243 aa16.23■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Tmprss11eQ5S248 423 aa16.23■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Akap4Q60662 849 aa16.23■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Cnnm4Q69ZF7 771 aa16.23■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Xpo4Q9ESJ0 1151 aa16.23■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Dctpp1Q9QY93 170 aa16.23■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Nlrp5Q9R1M5 1163 aa16.23■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Sap30bpQ02614 308 aa16.22■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Oog3Q3UWY1 500 aa16.22■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Kctd1Q5M956 257 aa16.22■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Prl2c1Q5SVL9 228 aa16.22■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Rasa3Q60790 834 aa16.22■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Arhgef2Q60875 985 aa16.22■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Olfr119Q7TRJ5 321 aa16.22■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Vgll2Q8BGW8 322 aa16.22■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Ascc2Q91WR3 749 aa16.22■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Ccdc94Q9D6J3 314 aa16.22■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Nr2e3Q9QXZ7 395 aa16.22■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Sel1lQ9Z2G6 790 aa16.22■□□□□ 0.19
Ssr1-204ENSMUST00000225319 A0A0U1RNP2 1173 aa16.21■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Dapk3O54784 448 aa16.21■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Mx1P09922 631 aa16.21■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Ubxn2bQ0KL01 331 aa16.21■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Kiaa1468Q148V7 1216 aa16.21■□□□□ 0.19
Ssr1-204ENSMUST00000225319 ArsiQ32KI9 573 aa16.21■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Zfp251Q6PCX8 632 aa16.21■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Arid5bQ8BM75 1188 aaKnown RBP16.21■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Armc6Q8BNU0 468 aa16.21■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Plcg2Q8CIH5 1265 aa16.21■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Trim29Q8R2Q0 587 aa16.21■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Eid1Q9DCR4 169 aa16.21■□□□□ 0.19
Ssr1-204ENSMUST00000225319 Lmbr1Q9JIT0 490 aa16.21■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 45 ms