RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 Cracr2aQ3UP38 310 aa8.45□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Adam6bQ6IMH7 756 aa8.45□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Asic3Q6X1Y6 530 aa8.45□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Sec24bQ80ZX0 1251 aa8.45□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Parp10Q8CIE4 960 aa8.45□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Spata2Q8K004 515 aa8.45□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Nup133Q8R0G9 1155 aa8.45□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Tsnaxip1Q99P25 704 aa8.45□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Akr1e2Q9DCT1 301 aa8.45□□□□□ -1.06
Bdnf-209ENSMUST00000111050 PtpruB1AUH1 1446 aa8.45□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Kiaa1522A2A7S8 1013 aa8.45□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Tcp10bE9PYJ0 438 aa8.45□□□□□ -1.06
Bdnf-209ENSMUST00000111050 GpiP06745 558 aaKnown RBP8.45□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Dab2P98078 766 aa8.45□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Smarcad1Q04692 1021 aa8.45□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Zfyve27Q3TXX3 415 aa8.45□□□□□ -1.06
Bdnf-209ENSMUST00000111050 GmncQ3URY2 333 aa8.45□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Ift20Q61025 132 aa8.45□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Ppp4r3aQ6P2K6 820 aa8.45□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Bsdc1Q80Y55 427 aa8.45□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Ccdc172Q810N9 267 aa8.45□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Micall1Q8BGT6 870 aa8.45□□□□□ -1.06
Bdnf-209ENSMUST00000111050 NelfbQ8C4Y3 580 aa8.45□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Fam161bQ8CB59 589 aa8.45□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Cnot6lQ8VEG6 555 aa8.45□□□□□ -1.06
Bdnf-209ENSMUST00000111050 LrmdaQ9D9B4 229 aa8.45□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Shank2Q80Z38 1476 aa8.45□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Adamts7Q68SA9 1657 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 DgkiD3YWQ0 1071 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 ErmardE9Q048 622 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Ampd3O08739 766 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Trappc3O55013 180 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Dnm2P39054 870 aaKnown RBP8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 VeztQ3ZK22 780 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Bola3Q8CEI1 110 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 PccaQ91ZA3 724 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Krt23Q99PS0 422 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Ftsj3Q9DBE9 838 aaKnown RBP8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Coro1cQ9WUM4 474 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Slfn8B1ARD8 910 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 RaraP11416 462 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Kif5cP28738 956 aaKnown RBP8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Igfbp6P47880 238 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Nkx2-3P97334 362 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Nlrp9bQ66X22 1003 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Adck2Q6NSR3 617 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Ankzf1Q80UU1 748 aaKnown RBP8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Srrm3Q80WV7 648 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 FtoQ8BGW1 502 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Pak2Q8CIN4 524 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Ero1aQ8R180 464 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Apopt1Q9CQW7 192 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Gpihbp1Q9D1N2 228 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 MefvQ9JJ26 767 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Sorbs3Q9R1Z8 733 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Ankrd2Q9WV06 328 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 C5P06684 1680 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Yeats2Q3TUF7 1407 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Wdr72D3YYM4 1114 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Pak1O88643 545 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Mx1P09922 631 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Gnat1P20612 350 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Ifnar1P33896 590 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 HmmrQ00547 794 aaKnown RBP8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Sap30bpQ02614 308 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Cdkl5Q3UTQ8 938 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 HellsQ60848 821 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Dnajc8Q6NZB0 253 aaKnown RBP8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Pank4Q80YV4 820 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Dennd6aQ8BH65 605 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Slc13a4Q8BZ82 625 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Nup58Q8R332 587 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 GckrQ91X44 587 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Etnk1Q9D4V0 363 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Dnajc7Q9QYI3 494 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Znf394Q9Z1D9 521 aa8.44□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Lmtk3Q5XJV6 1424 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Atp10bB1AWN4 1474 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Apba1B2RUJ5 842 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Lipo1J3QME6 396 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Trove2O08848 538 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 MybP06876 636 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Chmp6P0C0A3 200 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Ets2P15037 468 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Ccdc160Q3UYG1 323 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Ksr1Q61097 873 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 HhatQ8BMT9 499 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 CntrobQ8CB62 887 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Rbm41Q8JZV4 413 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Lgi2Q8K4Z0 550 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Ube2sQ921J4 223 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Arfgap2Q99K28 520 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Ranbp17Q99NF8 1088 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Atp6v1e2Q9D593 226 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Rsrc1Q9DBU6 334 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 GdaQ9R111 454 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Col20a1Q923P0 1320 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Cps1Q8C196 1500 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Gm28360A0A087WR25 190 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Mms22lB1AUR6 1238 aa8.43□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms