RNA–Protein interactions for RNA: ENSMUST00000111047.8

Bdnf-207, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,042 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-207ENSMUST00000111047 Traf1P39428 409 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Eya3P97480 510 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 HmmrQ00547 794 aaKnown RBP8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Tbx2Q60707 711 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Rasgrp4Q8BTM9 673 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Hps4Q99KG7 671 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Ccdc83Q9D4V3 305 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 MycbpQ9EQS3 103 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Aox3G3X982 1335 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Trim30cD3YVI9 513 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Tdo2P48776 406 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Ano9P86044 747 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Olfr121Q5CZY0 321 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Rhpn1Q61085 643 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Fkbp3Q62446 224 aaKnown RBP8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Ushbp1Q8R370 680 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Erlin1Q91X78 346 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 CutaQ9CQ89 177 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Ccdc43Q9CR29 222 aaKnown RBP8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Tiam2Q6ZPF3 1715 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Bcl9lQ67FY2 1494 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Gm43738A0A0G2JEA5 862 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Kif23E9Q5G3 953 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Gm42641I6L9G2 585 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Snai1Q02085 264 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 GscQ02591 256 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Ric8aQ3TIR3 530 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Srp68Q8BMA6 625 aaKnown RBP8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 AtripQ8BMG1 785 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Spata4Q8K3V1 295 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Sar1bQ9CQC9 198 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Apopt1Q9CQW7 192 aa8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Ybx3Q9JKB3 361 aaKnown RBP8.38□□□□□ -1.07
Bdnf-207ENSMUST00000111047 MeiocA2AG06 965 aa8.37□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Abcb4P21440 1276 aa8.37□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Cc2d1bQ8BRN9 848 aa8.37□□□□□ -1.07
Bdnf-207ENSMUST00000111047 ParnQ8VDG3 624 aa8.37□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Q91WD4 421 aa8.37□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Haus2Q9CQS9 234 aa8.37□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Phlpp1Q8CHE4 1687 aa8.37□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Col3a1P08121 1464 aa8.37□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Nav1Q8CH77 1875 aa8.37□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Cul4bA2A432 970 aaKnown RBP8.37□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Cyb5rlB1AS42 316 aa8.37□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Gm28042B7ZCM9 1014 aa8.37□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Parp1P11103 1013 aaKnown RBP8.37□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Terf1P70371 421 aa8.37□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Plekha7Q3UIL6 1118 aaKnown RBP8.37□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Camsap3Q80VC9 1252 aa8.37□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Krt222Q8CCX5 294 aa8.37□□□□□ -1.07
Bdnf-207ENSMUST00000111047 SetQ9EQU5 289 aaKnown RBP8.37□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Tfap4Q9JIZ5 338 aa8.37□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Rps6ka4Q9Z2B9 773 aa8.37□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Zscan18E9PUD6 809 aa8.37□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Stag2O35638 1231 aa8.37□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Enc1O35709 589 aa8.37□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Tpp1O89023 562 aa8.37□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Krt18P05784 423 aa8.37□□□□□ -1.07
Bdnf-207ENSMUST00000111047 GpiP06745 558 aaKnown RBP8.37□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Evi5P97366 809 aa8.37□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Tmem179Q8BHH9 233 aa8.37□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Hirip3Q8BLH7 601 aa8.37□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Iqcb1Q8BP00 598 aa8.37□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Mis18aQ9CZJ6 204 aa8.37□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Golga5Q9QYE6 729 aa8.37□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Plekhg2Q6KAU7 1340 aa8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Serpina16D3Z660 418 aa8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Slc39a2G3X943 309 aa8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Eif6O55135 245 aa8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Pdrg1P59048 133 aa8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Mars2Q499X9 586 aaKnown RBP8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Mum1l1Q4VA55 681 aa8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Tsr1Q5SWD9 803 aa8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Sdccag8Q80UF4 717 aa8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Ddx10Q80Y44 875 aaKnown RBP8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Ccdc181Q80ZU5 509 aa8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Pramel6Q810Y9 485 aa8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Ift74Q8BKE9 600 aa8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Q8C5C9 218 aa8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Tmem63cQ8CBX0 802 aa8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Ubxn8Q9QZ49 277 aa8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 IkQ9Z1M8 557 aaKnown RBP8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Tnks1bp1P58871 1720 aa8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Wnk3Q80XP9 1757 aa8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Gm28919A0A087WP35 240 aa8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Kifc2O08672 792 aa8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Npy5rO70342 466 aa8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 LRWD1Q8BUI3 648 aaKnown RBP8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Mettl5Q8K1A0 209 aa8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Taf6lQ8R2K4 616 aa8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Xrcc4Q924T3 326 aa8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Rnf34Q99KR6 376 aa8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Arl6ip4Q9JM93 229 aa8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 CluhQ5SW19 1315 aa8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Gm5134E9QAB5 671 aa8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Rtkn2Q14B46 604 aa8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Acot10Q32MW3 439 aa8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Cct6bQ61390 531 aa8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Mrps31Q61733 384 aaKnown RBP8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Krit1Q6S5J6 736 aa8.36□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 31 ms