RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Uts2Q9QZQ3 123 aa17.96■□□□□ 0.47
Col17a1-202ENSMUST00000086923 Gm14525B1AZA0 212 aa17.96■□□□□ 0.47
Col17a1-202ENSMUST00000086923 Gnat1P20612 350 aa17.96■□□□□ 0.47
Col17a1-202ENSMUST00000086923 Psmc1P62192 440 aa17.96■□□□□ 0.47
Col17a1-202ENSMUST00000086923 Skap2Q3UND0 358 aa17.96■□□□□ 0.47
Col17a1-202ENSMUST00000086923 Ctnna3Q65CL1 895 aa17.96■□□□□ 0.47
Col17a1-202ENSMUST00000086923 Gm2012B1B0R1 212 aa17.96■□□□□ 0.47
Col17a1-202ENSMUST00000086923 Kcna3P16390 528 aa17.96■□□□□ 0.47
Col17a1-202ENSMUST00000086923 Usp5P56399 858 aaKnown RBP17.96■□□□□ 0.47
Col17a1-202ENSMUST00000086923 Nsrp1Q5NCR9 542 aa17.96■□□□□ 0.47
Col17a1-202ENSMUST00000086923 PapolaQ61183 739 aa17.96■□□□□ 0.47
Col17a1-202ENSMUST00000086923 Mpp4Q6P7F1 635 aa17.96■□□□□ 0.47
Col17a1-202ENSMUST00000086923 Vipas39Q8BGQ1 491 aa17.96■□□□□ 0.47
Col17a1-202ENSMUST00000086923 Bola2Q8BGS2 86 aa17.96■□□□□ 0.47
Col17a1-202ENSMUST00000086923 MgarpQ8VI64 283 aa17.96■□□□□ 0.47
Col17a1-202ENSMUST00000086923 Ccdc103Q9D9P2 237 aa17.96■□□□□ 0.47
Col17a1-202ENSMUST00000086923 Card9A2AIV8 536 aa17.96■□□□□ 0.47
Col17a1-202ENSMUST00000086923 Arhgap6O54834 987 aa17.96■□□□□ 0.47
Col17a1-202ENSMUST00000086923 Pde4dQ01063 747 aa17.96■□□□□ 0.47
Col17a1-202ENSMUST00000086923 Smarcad1Q04692 1021 aa17.96■□□□□ 0.47
Col17a1-202ENSMUST00000086923 OtulinQ3UCV8 352 aa17.96■□□□□ 0.47
Col17a1-202ENSMUST00000086923 Ppp4r3aQ6P2K6 820 aa17.96■□□□□ 0.47
Col17a1-202ENSMUST00000086923 Clic6Q8BHB9 596 aa17.96■□□□□ 0.47
Col17a1-202ENSMUST00000086923 Usp37Q8C0R0 979 aa17.96■□□□□ 0.47
Col17a1-202ENSMUST00000086923 Ints9Q8K114 658 aaKnown RBP17.96■□□□□ 0.47
Col17a1-202ENSMUST00000086923 Eef1gQ9D8N0 437 aaKnown RBP17.96■□□□□ 0.47
Col17a1-202ENSMUST00000086923 Olfr310B2RVZ1 332 aa17.95■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Speer4f2E9Q366 295 aa17.95■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Atp2a3Q64518 1038 aa17.95■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Enox1Q8BHR2 643 aaKnown RBP17.95■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Kdm3aQ6PCM1 1323 aa17.95■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Kif24Q6NWW5 1356 aa17.95■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Casq2O09161 415 aa17.95■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Cdk4P30285 303 aa17.95■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Pkp1P97350 728 aaKnown RBP17.95■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Uap1Q91YN5 522 aa17.95■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Gm28042B7ZCM9 1014 aa17.95■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Arl1P61211 181 aa17.95■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Fbxw10Q5SUS0 1030 aa17.95■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Gpbp1Q6NXH3 473 aaKnown RBP17.95■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Sec23ipQ6NZC7 998 aa17.95■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Arhgap29Q8CGF1 1266 aa17.95■□□□□ 0.46
Col17a1-202ENSMUST00000086923 1700020D05RikQ99PB1 294 aa17.95■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Gm43638A0A0J9YU36 694 aa17.95■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Kcnj14Q8JZN3 434 aa17.95■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Cul1Q9WTX6 776 aa17.95■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Tex14Q7M6U3 1450 aa17.95■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Bpifb4A2BGH0 617 aa17.95■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Traf5P70191 558 aa17.95■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Wdr70Q3TWF6 657 aa17.95■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Dennd2cQ6P9P8 914 aa17.95■□□□□ 0.46
Col17a1-202ENSMUST00000086923 St13Q99L47 371 aaKnown RBP17.95■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Mug1P28665 1476 aa17.94■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Mmrn1B2RPV6 1210 aa17.94■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Hipk4Q3V016 616 aa17.94■□□□□ 0.46
Col17a1-202ENSMUST00000086923 HellsQ60848 821 aa17.94■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Rbm17Q8JZX4 405 aaKnown RBP17.94■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Thoc1Q8R3N6 657 aaKnown RBP17.94■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Pfdn1Q9CWM4 122 aa17.94■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Gstt4Q9D4P7 240 aa17.94■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Ddx24Q9ESV0 857 aaKnown RBP17.94■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Q922C1 641 aa17.94■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Serpinb12Q9D7P9 423 aa17.94■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Atf2P16951 487 aaKnown RBP17.94■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Snx14Q8BHY8 964 aa17.94■□□□□ 0.46
Col17a1-202ENSMUST00000086923 NxnP97346 435 aa17.94■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Ripply1Q2WG77 201 aa17.94■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Ppp1r13bQ62415 1087 aa17.94■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Lyve1Q8BHC0 318 aa17.94■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Trip10Q8CJ53 603 aa17.94■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Plcb4Q91UZ1 1175 aa17.94■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Pramef12Q9D2F1 463 aa17.94■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Tmed2Q9R0Q3 201 aa17.94■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Nck2O55033 380 aa17.93■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Syt2P46097 422 aa17.93■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Arhgef9Q3UTH8 516 aa17.93■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Gimap8Q75N62 688 aa17.93■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Rexo1Q7TT28 1213 aa17.93■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Pih1h3bQ8C6P5 218 aa17.93■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Tex9Q9D845 387 aa17.93■□□□□ 0.46
Col17a1-202ENSMUST00000086923 C2cd2E9Q3C1 696 aa17.93■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Raph1F2Z3U3 1266 aa17.93■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Gprasp2Q8BUY8 826 aa17.93■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Atp1a1Q8VDN2 1023 aaKnown RBP17.93■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Bicc1Q99MQ1 977 aaKnown RBP17.93■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Setd6Q9CWY3 473 aa17.93■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Slc3a2P10852 526 aaKnown RBP17.93■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Ccne1Q61457 408 aa17.93■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Usp27Q8CEG8 438 aa17.93■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Nod2Q8K3Z0 1020 aa17.93■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Afg3l1Q920A7 789 aaKnown RBP17.93■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Ccdc78D3Z5T1 437 aa17.93■□□□□ 0.46
Col17a1-202ENSMUST00000086923 H2afzP0C0S6 128 aa17.93■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Rb1P13405 921 aa17.93■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Eno1P17182 434 aaKnown RBP17.93■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Serpina1bP22599 413 aa17.93■□□□□ 0.46
Col17a1-202ENSMUST00000086923 H2afvQ3THW5 128 aa17.93■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Serpinb6dQ3UWK8 375 aa17.93■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Trim21Q62191 470 aa17.93■□□□□ 0.46
Col17a1-202ENSMUST00000086923 Tcp11l2Q8K1H7 517 aa17.93■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms