RNA–Protein interactions for RNA: YLR250W

SSP120, Transcript of Protein of unknown function, yeastyeast

Gene SSP120, Length 705 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSP120YLR250W RSC6P25632 483 aa5.6□□□□□ -1.51
SSP120YLR250W NDI1P32340 513 aa5.6□□□□□ -1.51
SSP120YLR250W PET309P32522 965 aaPredicted RBP5.6□□□□□ -1.51
SSP120YLR250W SRP101P32916 621 aa5.6□□□□□ -1.51
SSP120YLR250W KES1P35844 434 aaKnown RBP5.6□□□□□ -1.51
SSP120YLR250W PBP2P38151 413 aaKnown RBP RIP-Chip data5.6□□□□□ -1.51not detected
SSP120YLR250W SMF2P38778 549 aa5.6□□□□□ -1.51
SSP120YLR250W YHR182WP38870 785 aa5.6□□□□□ -1.51
SSP120YLR250W SEO1P39709 593 aa5.6□□□□□ -1.51
SSP120YLR250W YMR134WP40207 237 aa5.6□□□□□ -1.51
SSP120YLR250W ALG8P40351 577 aa5.6□□□□□ -1.51
SSP120YLR250W ERR3P42222 437 aa5.6□□□□□ -1.51
SSP120YLR250W ALR2P43553 858 aa5.6□□□□□ -1.51
SSP120YLR250W RIM21P48565 533 aa5.6□□□□□ -1.51
SSP120YLR250W YPR003CP53394 754 aa5.6□□□□□ -1.51
SSP120YLR250W OSH6Q02201 448 aa5.6□□□□□ -1.51
SSP120YLR250W YMR114CQ04471 368 aaKnown RBP5.6□□□□□ -1.51
SSP120YLR250W CDC73Q06697 393 aa5.6□□□□□ -1.51
SSP120YLR250W GYP1Q08484 637 aa5.6□□□□□ -1.51
SSP120YLR250W AVL9Q12500 764 aa5.6□□□□□ -1.51
SSP120YLR250W HRP1Q99383 534 aaKnown RBP5.6□□□□□ -1.51
SSP120YLR250W HOP1P20050 605 aa5.59□□□□□ -1.51
SSP120YLR250W PHO84P25297 587 aaKnown RBP5.59□□□□□ -1.51
SSP120YLR250W DOM34P33309 386 aa5.59□□□□□ -1.51
SSP120YLR250W SKN1P33336 771 aa5.59□□□□□ -1.51
SSP120YLR250W EMC3P36039 253 aa5.59□□□□□ -1.51
SSP120YLR250W EBP2P36049 427 aaKnown RBP5.59□□□□□ -1.51
SSP120YLR250W MRPL37P36532 105 aa5.59□□□□□ -1.51
SSP120YLR250W MSG5P38590 489 aa5.59□□□□□ -1.51
SSP120YLR250W PMT3P47190 753 aa5.59□□□□□ -1.51
SSP120YLR250W SGF73P53165 657 aa5.59□□□□□ -1.51
SSP120YLR250W RIM8P53179 542 aa5.59□□□□□ -1.51
SSP120YLR250W EFM6P53970 246 aa5.59□□□□□ -1.51
SSP120YLR250W AAT1Q01802 451 aa5.59□□□□□ -1.51
SSP120YLR250W DIC1Q06143 298 aa5.59□□□□□ -1.51
SSP120YLR250W HRK1Q08732 759 aaKnown RBP5.59□□□□□ -1.51
SSP120YLR250W UPC2Q12151 913 aa5.59□□□□□ -1.51
SSP120YLR250W RRP12Q12754 1228 aaKnown RBP5.59□□□□□ -1.51
SSP120YLR250W ILS1P09436 1072 aaKnown RBP5.58□□□□□ -1.52
SSP120YLR250W NSP1P14907 823 aaKnown RBP5.58□□□□□ -1.52
SSP120YLR250W PHO3P24031 467 aa5.58□□□□□ -1.52
SSP120YLR250W YCL068CP25593 260 aa5.58□□□□□ -1.52
SSP120YLR250W YCR099CP25657 155 aa5.58□□□□□ -1.52
SSP120YLR250W HEM12P32347 362 aaPredicted RBP5.58□□□□□ -1.52
SSP120YLR250W GCD6P32501 712 aaKnown RBP5.58□□□□□ -1.52
SSP120YLR250W STO1P34160 861 aaKnown RBP5.58□□□□□ -1.52
SSP120YLR250W SQT1P35184 431 aa5.58□□□□□ -1.52
SSP120YLR250W DEF1P35732 738 aaKnown RBP5.58□□□□□ -1.52
SSP120YLR250W MIC60P36112 540 aa5.58□□□□□ -1.52
SSP120YLR250W PLB1P39105 664 aa5.58□□□□□ -1.52
SSP120YLR250W ACO2P39533 789 aa5.58□□□□□ -1.52
SSP120YLR250W IME4P41833 600 aa5.58□□□□□ -1.52
SSP120YLR250W ATG36P46983 293 aa5.58□□□□□ -1.52
SSP120YLR250W HLJ1P48353 224 aa5.58□□□□□ -1.52
SSP120YLR250W SIZ1Q04195 904 aa5.58□□□□□ -1.52
SSP120YLR250W QCR6P00127 147 aa5.57□□□□□ -1.52
SSP120YLR250W PHO5P00635 467 aa5.57□□□□□ -1.52
SSP120YLR250W CDC20P26309 610 aa5.57□□□□□ -1.52
SSP120YLR250W PAP1P29468 568 aaKnown RBP5.57□□□□□ -1.52
SSP120YLR250W ATP11P32453 318 aa5.57□□□□□ -1.52
SSP120YLR250W GDA1P32621 518 aa5.57□□□□□ -1.52
SSP120YLR250W CNS1P33313 385 aa5.57□□□□□ -1.52
SSP120YLR250W LRG1P35688 1017 aa5.57□□□□□ -1.52
SSP120YLR250W FMP46P36141 133 aaKnown RBP5.57□□□□□ -1.52
SSP120YLR250W MRP21P38175 177 aa5.57□□□□□ -1.52
SSP120YLR250W UBA4P38820 440 aa5.57□□□□□ -1.52
SSP120YLR250W SCC4P40090 624 aa5.57□□□□□ -1.52
SSP120YLR250W DPH1P40487 425 aaKnown RBP5.57□□□□□ -1.52
SSP120YLR250W YJL107CP42947 387 aa5.57□□□□□ -1.52
SSP120YLR250W NOP15P53927 220 aaPredicted RBP5.57□□□□□ -1.52
SSP120YLR250W RHO3Q00245 231 aaKnown RBP5.57□□□□□ -1.52
SSP120YLR250W NHX1Q04121 633 aa5.57□□□□□ -1.52
SSP120YLR250W TDA9Q04545 1251 aa5.57□□□□□ -1.52
SSP120YLR250W VTA1Q06263 330 aa5.57□□□□□ -1.52
SSP120YLR250W RSC3Q06639 885 aa5.57□□□□□ -1.52
SSP120YLR250W HSP26P15992 214 aaKnown RBP RIP-Chip data5.56□□□□□ -1.52not detected
SSP120YLR250W GUT2P32191 649 aa5.56□□□□□ -1.52
SSP120YLR250W MVD1P32377 396 aaKnown RBP5.56□□□□□ -1.52
SSP120YLR250W HOG1P32485 435 aa5.56□□□□□ -1.52
SSP120YLR250W MEI5P32489 222 aa5.56□□□□□ -1.52
SSP120YLR250W SMI1P32566 505 aa5.56□□□□□ -1.52
SSP120YLR250W RTG1P32607 177 aa5.56□□□□□ -1.52
SSP120YLR250W NTR2P36118 322 aaPredicted RBP5.56□□□□□ -1.52
SSP120YLR250W MCX1P38323 520 aaPredicted RBP5.56□□□□□ -1.52
SSP120YLR250W YHR033WP38690 423 aa5.56□□□□□ -1.52
SSP120YLR250W PTI1P39927 425 aaPredicted RBP5.56□□□□□ -1.52
SSP120YLR250W PXA1P41909 870 aa5.56□□□□□ -1.52
SSP120YLR250W PFA3P42836 336 aa5.56□□□□□ -1.52
SSP120YLR250W YFR020WP43600 232 aa5.56□□□□□ -1.52
SSP120YLR250W FHN1P53279 174 aa5.56□□□□□ -1.52
SSP120YLR250W ZRG17P53735 605 aa5.56□□□□□ -1.52
SSP120YLR250W ALF1P53904 254 aa5.56□□□□□ -1.52
SSP120YLR250W PET117Q02771 107 aa5.56□□□□□ -1.52
SSP120YLR250W ELP4Q02884 456 aaKnown RBP5.56□□□□□ -1.52
SSP120YLR250W RRP45Q05636 305 aaKnown RBP5.56□□□□□ -1.52
SSP120YLR250W AIM41Q12032 185 aa5.56□□□□□ -1.52
SSP120YLR250W MSL5Q12186 476 aaKnown RBP RIP-Chip data5.56□□□□□ -1.52not detected
SSP120YLR250W PNS1Q12412 539 aa5.56□□□□□ -1.52
SSP120YLR250W IMA3P0CW40 589 aa5.55□□□□□ -1.52
SSP120YLR250W IMA4P0CW41 589 aa5.55□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms