RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 IKZF1Q13422 519 aa8.97□□□□□ -0.97
RFC1-217ENST00000639695 MLANAQ16655 118 aa8.97□□□□□ -0.97
RFC1-217ENST00000639695 C19orf47Q8N9M1 422 aaKnown RBP8.97□□□□□ -0.97
RFC1-217ENST00000639695 FAM84AQ96KN4 292 aa8.97□□□□□ -0.97
RFC1-217ENST00000639695 PCDH12Q9NPG4 1184 aa8.97□□□□□ -0.97
RFC1-217ENST00000639695 CTNND2Q9UQB3 1225 aa8.97□□□□□ -0.97
RFC1-217ENST00000639695 SNX11Q9Y5W9 270 aa8.97□□□□□ -0.97
RFC1-217ENST00000639695 ESYT3A0FGR9 886 aa8.96□□□□□ -0.98
RFC1-217ENST00000639695 C16orf86Q6ZW13 317 aa8.96□□□□□ -0.98
RFC1-217ENST00000639695 SLC38A3Q99624 504 aa8.96□□□□□ -0.98
RFC1-217ENST00000639695 PRDM10Q9NQV6 1147 aa8.96□□□□□ -0.98
RFC1-217ENST00000639695 KCNMB1Q16558 191 aa8.95□□□□□ -0.98
RFC1-217ENST00000639695 MICAL1Q8TDZ2 1067 aa8.95□□□□□ -0.98
RFC1-217ENST00000639695 THAP3Q8WTV1 239 aaPredicted RBP8.95□□□□□ -0.98
RFC1-217ENST00000639695 GAL3ST3Q96A11 431 aa8.95□□□□□ -0.98
RFC1-217ENST00000639695 TM9SF2Q99805 663 aa8.95□□□□□ -0.98
RFC1-217ENST00000639695 TMEM260Q9NX78 707 aa8.95□□□□□ -0.98
RFC1-217ENST00000639695 DCDC2CA8MYV0 355 aa8.94□□□□□ -0.98
RFC1-217ENST00000639695 IGF2BP3O00425 579 aaKnown RBP eCLIP8.94□□□□□ -0.98
RFC1-217ENST00000639695 MARCH6O60337 910 aa8.94□□□□□ -0.98
RFC1-217ENST00000639695 GRIN3BO60391 1043 aa8.94□□□□□ -0.98
RFC1-217ENST00000639695 GJB6O95452 261 aa8.94□□□□□ -0.98
RFC1-217ENST00000639695 EOMESO95936 686 aa8.94□□□□□ -0.98
RFC1-217ENST00000639695 GYS2P54840 703 aa8.94□□□□□ -0.98
RFC1-217ENST00000639695 C12orf40Q86WS4 652 aa8.94□□□□□ -0.98
RFC1-217ENST00000639695 ASB11Q8WXH4 323 aa8.94□□□□□ -0.98
RFC1-217ENST00000639695 ACSBG1Q96GR2 724 aa8.94□□□□□ -0.98
RFC1-217ENST00000639695 KANSL2Q9H9L4 492 aa8.94□□□□□ -0.98
RFC1-217ENST00000639695 SLC12A7Q9Y666 1083 aa8.94□□□□□ -0.98
RFC1-217ENST00000639695 PITPNM2Q9BZ72 1349 aa8.94□□□□□ -0.98
RFC1-217ENST00000639695 PTPN11Q06124 597 aaPredicted RBP8.93□□□□□ -0.98
RFC1-217ENST00000639695 RING1Q06587 406 aa8.93□□□□□ -0.98
RFC1-217ENST00000639695 C2orf27AQ580R0 203 aa8.93□□□□□ -0.98
RFC1-217ENST00000639695 KIAA0907Q7Z7F0 614 aaPredicted RBP8.93□□□□□ -0.98
RFC1-217ENST00000639695 C1QL4Q86Z23 238 aa8.93□□□□□ -0.98
RFC1-217ENST00000639695 SYNPOQ8N3V7 929 aa8.93□□□□□ -0.98
RFC1-217ENST00000639695 ST13P5Q8NFI4 369 aaPredicted RBP8.93□□□□□ -0.98
RFC1-217ENST00000639695 ZNF669Q96BR6 464 aaPredicted RBP8.93□□□□□ -0.98
RFC1-217ENST00000639695 FEZ1Q99689 392 aa8.93□□□□□ -0.98
RFC1-217ENST00000639695 CWC22Q9HCG8 908 aaKnown RBP8.93□□□□□ -0.98
RFC1-217ENST00000639695 GTF2IRD1Q9UHL9 959 aa8.93□□□□□ -0.98
RFC1-217ENST00000639695 POLR3KQ9Y2Y1 108 aaPredicted RBP8.93□□□□□ -0.98
RFC1-217ENST00000639695 CNTNAP4Q9C0A0 1308 aa8.93□□□□□ -0.98
RFC1-217ENST00000639695 KDM2BQ8NHM5 1336 aa8.92□□□□□ -0.98
RFC1-217ENST00000639695 GUCY2CP25092 1073 aa8.92□□□□□ -0.98
RFC1-217ENST00000639695 CFPP27918 469 aa8.92□□□□□ -0.98
RFC1-217ENST00000639695 TTC6Q86TZ1 520 aa8.92□□□□□ -0.98
RFC1-217ENST00000639695 FAM178BQ8IXR5 827 aa8.92□□□□□ -0.98
RFC1-217ENST00000639695 C19orf73Q9NVV2 129 aa8.92□□□□□ -0.98
RFC1-217ENST00000639695 PCDHA4Q9UN74 947 aa8.92□□□□□ -0.98
RFC1-217ENST00000639695 A0A1W2PQH9 124 aa8.91□□□□□ -0.98
RFC1-217ENST00000639695 SSRP1Q08945 709 aaKnown RBP8.91□□□□□ -0.98
RFC1-217ENST00000639695 TCEA2Q15560 299 aa8.91□□□□□ -0.98
RFC1-217ENST00000639695 RUFY4Q6ZNE9 571 aa8.91□□□□□ -0.98
RFC1-217ENST00000639695 PRR23BQ6ZRT6 265 aa8.91□□□□□ -0.98
RFC1-217ENST00000639695 NOL8Q76FK4 1167 aaKnown RBP8.91□□□□□ -0.98
RFC1-217ENST00000639695 HDXQ7Z353 690 aa8.91□□□□□ -0.98
RFC1-217ENST00000639695 KRTAP4-11Q9BYQ6 195 aa8.91□□□□□ -0.98
RFC1-217ENST00000639695 SNCAIPQ9Y6H5 919 aa8.91□□□□□ -0.98
RFC1-217ENST00000639695 PRR36Q9H6K5 1346 aa8.9□□□□□ -0.98
RFC1-217ENST00000639695 PRR33A8MZF0 331 aa8.9□□□□□ -0.98
RFC1-217ENST00000639695 HTR3BO95264 441 aa8.9□□□□□ -0.98
RFC1-217ENST00000639695 SQSTM1Q13501 440 aa8.9□□□□□ -0.98
RFC1-217ENST00000639695 NCAPHQ15003 741 aa8.9□□□□□ -0.98
RFC1-217ENST00000639695 ZBTB37Q5TC79 503 aa8.9□□□□□ -0.98
RFC1-217ENST00000639695 C6orf15Q6UXA7 325 aaPredicted RBP8.9□□□□□ -0.98
RFC1-217ENST00000639695 LCNL1Q6ZST4 164 aa8.9□□□□□ -0.98
RFC1-217ENST00000639695 EEPD1Q7L9B9 569 aa8.9□□□□□ -0.98
RFC1-217ENST00000639695 PFDN2Q9UHV9 154 aa8.9□□□□□ -0.98
RFC1-217ENST00000639695 MEIS3P2A8K0S8 358 aa8.89□□□□□ -0.99
RFC1-217ENST00000639695 ZNF865P0CJ78 1059 aaPredicted RBP8.89□□□□□ -0.99
RFC1-217ENST00000639695 PDE4BQ07343 736 aa8.89□□□□□ -0.99
RFC1-217ENST00000639695 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.89□□□□□ -0.99
RFC1-217ENST00000639695 TAB3Q8N5C8 712 aaPredicted RBP8.89□□□□□ -0.99
RFC1-217ENST00000639695 JMYQ8N9B5 988 aa8.89□□□□□ -0.99
RFC1-217ENST00000639695 BHLHE22Q8NFJ8 381 aaPredicted RBP8.89□□□□□ -0.99
RFC1-217ENST00000639695 CARS2Q9HA77 564 aaKnown RBP8.89□□□□□ -0.99
RFC1-217ENST00000639695 SEMA3GQ9NS98 782 aa8.89□□□□□ -0.99
RFC1-217ENST00000639695 FAM53CQ9NYF3 392 aa8.89□□□□□ -0.99
RFC1-217ENST00000639695 TACC3Q9Y6A5 838 aa8.89□□□□□ -0.99
RFC1-217ENST00000639695 GFRA2O00451 464 aa8.88□□□□□ -0.99
RFC1-217ENST00000639695 KRT1P04264 644 aa8.88□□□□□ -0.99
RFC1-217ENST00000639695 RAP1GAPP47736 663 aa8.88□□□□□ -0.99
RFC1-217ENST00000639695 WIPI1Q5MNZ9 446 aaPredicted RBP8.88□□□□□ -0.99
RFC1-217ENST00000639695 INTS3Q68E01 1043 aaKnown RBP8.88□□□□□ -0.99
RFC1-217ENST00000639695 ARMCX6Q7L4S7 300 aa8.88□□□□□ -0.99
RFC1-217ENST00000639695 ANTXR1Q9H6X2 564 aa8.88□□□□□ -0.99
RFC1-217ENST00000639695 ATP13A1Q9HD20 1204 aa8.88□□□□□ -0.99
RFC1-217ENST00000639695 GMIPQ9P107 970 aa8.88□□□□□ -0.99
RFC1-217ENST00000639695 ZMYM5Q9UJ78 669 aa8.88□□□□□ -0.99
RFC1-217ENST00000639695 SLITRK5O94991 958 aa8.87□□□□□ -0.99
RFC1-217ENST00000639695 TSPAN15O95858 294 aa8.87□□□□□ -0.99
RFC1-217ENST00000639695 MASP1P48740 699 aa8.87□□□□□ -0.99
RFC1-217ENST00000639695 CLCN7P51798 805 aa8.87□□□□□ -0.99
RFC1-217ENST00000639695 ZSWIM2Q8NEG5 633 aa8.87□□□□□ -0.99
RFC1-217ENST00000639695 ELMO3Q96BJ8 720 aa8.87□□□□□ -0.99
RFC1-217ENST00000639695 HSPA12BQ96MM6 686 aa8.87□□□□□ -0.99
RFC1-217ENST00000639695 PHAXQ9H814 394 aaKnown RBP8.87□□□□□ -0.99
RFC1-217ENST00000639695 KCNK12Q9HB15 430 aa8.87□□□□□ -0.99
RFC1-217ENST00000639695 IQCA1LA6NCM1 817 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms