RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 MB21D1Q8N884 522 aa13.54□□□□□ -0.24
PTP4A1-207ENST00000639568 LENG1Q96BZ8 264 aaPredicted RBP13.54□□□□□ -0.24
PTP4A1-207ENST00000639568 TINF2Q9BSI4 451 aa13.54□□□□□ -0.24
PTP4A1-207ENST00000639568 TANGO6Q9C0B7 1094 aa13.54□□□□□ -0.24
PTP4A1-207ENST00000639568 USP44Q9H0E7 712 aa13.54□□□□□ -0.24
PTP4A1-207ENST00000639568 CERS4Q9HA82 394 aa13.54□□□□□ -0.24
PTP4A1-207ENST00000639568 CD320Q9NPF0 282 aa13.54□□□□□ -0.24
PTP4A1-207ENST00000639568 SAP30BPQ9UHR5 308 aaKnown RBP13.54□□□□□ -0.24
PTP4A1-207ENST00000639568 PLXNA1Q9UIW2 1896 aa13.54□□□□□ -0.24
PTP4A1-207ENST00000639568 ATAD5Q96QE3 1844 aa13.53□□□□□ -0.24
PTP4A1-207ENST00000639568 A0A0U1RQG5 324 aaPredicted RBP13.53□□□□□ -0.24
PTP4A1-207ENST00000639568 ARVCFO00192 962 aa13.53□□□□□ -0.24
PTP4A1-207ENST00000639568 TAL1P17542 331 aaPredicted RBP13.53□□□□□ -0.24
PTP4A1-207ENST00000639568 CDK7P50613 346 aa13.53□□□□□ -0.24
PTP4A1-207ENST00000639568 GORABQ5T7V8 394 aa13.53□□□□□ -0.24
PTP4A1-207ENST00000639568 SPATA5Q8NB90 893 aa13.53□□□□□ -0.24
PTP4A1-207ENST00000639568 PCSK9Q8NBP7 692 aaKnown RBP13.53□□□□□ -0.24
PTP4A1-207ENST00000639568 ACER1Q8TDN7 264 aa13.53□□□□□ -0.24
PTP4A1-207ENST00000639568 SPC25Q9HBM1 224 aa13.53□□□□□ -0.24
PTP4A1-207ENST00000639568 CABP5Q9NP86 173 aa13.53□□□□□ -0.24
PTP4A1-207ENST00000639568 FAM184BQ9ULE4 1060 aa13.53□□□□□ -0.24
PTP4A1-207ENST00000639568 FLT1P17948 1338 aa13.53□□□□□ -0.24
PTP4A1-207ENST00000639568 SYNRGQ9UMZ2 1314 aa13.53□□□□□ -0.24
PTP4A1-207ENST00000639568 WDFY4Q6ZS81 3184 aa13.53□□□□□ -0.24
PTP4A1-207ENST00000639568 ST18O60284 1047 aa13.52□□□□□ -0.25
PTP4A1-207ENST00000639568 CA3P07451 260 aa13.52□□□□□ -0.25
PTP4A1-207ENST00000639568 DDX10Q13206 875 aaKnown RBP13.52□□□□□ -0.25
PTP4A1-207ENST00000639568 ABCB5Q2M3G0 1257 aa13.52□□□□□ -0.25
PTP4A1-207ENST00000639568 KRT40Q6A162 431 aa13.52□□□□□ -0.25
PTP4A1-207ENST00000639568 RPUSD2Q8IZ73 545 aaKnown RBP13.52□□□□□ -0.25
PTP4A1-207ENST00000639568 ARNTL2Q8WYA1 636 aa13.52□□□□□ -0.25
PTP4A1-207ENST00000639568 CDCA7LQ96GN5 454 aa13.52□□□□□ -0.25
PTP4A1-207ENST00000639568 XAGE2Q96GT9 111 aa13.52□□□□□ -0.25
PTP4A1-207ENST00000639568 MMP19Q99542 508 aa13.52□□□□□ -0.25
PTP4A1-207ENST00000639568 HIPK3Q9H422 1215 aa13.52□□□□□ -0.25
PTP4A1-207ENST00000639568 HMG20BQ9P0W2 317 aa13.52□□□□□ -0.25
PTP4A1-207ENST00000639568 AKAP2Q9Y2D5 859 aa13.52□□□□□ -0.25
PTP4A1-207ENST00000639568 ROBO3Q96MS0 1386 aa13.51□□□□□ -0.25
PTP4A1-207ENST00000639568 A0A1B0GUL7 405 aa13.51□□□□□ -0.25
PTP4A1-207ENST00000639568 PGK2P07205 417 aa13.51□□□□□ -0.25
PTP4A1-207ENST00000639568 C6orf222P0C671 652 aaPredicted RBP13.51□□□□□ -0.25
PTP4A1-207ENST00000639568 ZNF865P0CJ78 1059 aaPredicted RBP13.51□□□□□ -0.25
PTP4A1-207ENST00000639568 KCTD2Q14681 263 aa13.51□□□□□ -0.25
PTP4A1-207ENST00000639568 CERKLQ49MI3 558 aaPredicted RBP13.51□□□□□ -0.25
PTP4A1-207ENST00000639568 NAA16Q6N069 864 aaPredicted RBP13.51□□□□□ -0.25
PTP4A1-207ENST00000639568 WDR63Q8IWG1 891 aa13.51□□□□□ -0.25
PTP4A1-207ENST00000639568 FAM126BQ8IXS8 530 aa13.51□□□□□ -0.25
PTP4A1-207ENST00000639568 KLHDC9Q8NEP7 349 aa13.51□□□□□ -0.25
PTP4A1-207ENST00000639568 SLC25A27O95847 323 aa13.5□□□□□ -0.25
PTP4A1-207ENST00000639568 ASGR1P07306 291 aa13.5□□□□□ -0.25
PTP4A1-207ENST00000639568 CCL23P55773 120 aa13.5□□□□□ -0.25
PTP4A1-207ENST00000639568 CCSAPQ6IQ19 270 aaPredicted RBP13.5□□□□□ -0.25
PTP4A1-207ENST00000639568 TATDN1Q6P1N9 297 aa13.5□□□□□ -0.25
PTP4A1-207ENST00000639568 SAMD1Q6SPF0 538 aaPredicted RBP13.5□□□□□ -0.25
PTP4A1-207ENST00000639568 PI16Q6UXB8 463 aa13.5□□□□□ -0.25
PTP4A1-207ENST00000639568 NEUROD6Q96NK8 337 aa13.5□□□□□ -0.25
PTP4A1-207ENST00000639568 DIS3Q9Y2L1 958 aaKnown RBP13.5□□□□□ -0.25
PTP4A1-207ENST00000639568 CACNA1FO60840 1977 aa13.5□□□□□ -0.25
PTP4A1-207ENST00000639568 DUSP11O75319 330 aaKnown RBP13.49□□□□□ -0.25
PTP4A1-207ENST00000639568 PPP4CP60510 307 aa13.49□□□□□ -0.25
PTP4A1-207ENST00000639568 GNASQ5JWF2 1037 aa13.49□□□□□ -0.25
PTP4A1-207ENST00000639568 FAM178BQ8IXR5 827 aa13.49□□□□□ -0.25
PTP4A1-207ENST00000639568 SERPINB13Q9UIV8 391 aa13.49□□□□□ -0.25
PTP4A1-207ENST00000639568 ZHX1Q9UKY1 873 aaPredicted RBP13.49□□□□□ -0.25
PTP4A1-207ENST00000639568 PA2G4Q9UQ80 394 aaKnown RBP13.49□□□□□ -0.25
PTP4A1-207ENST00000639568 SALL2Q9Y467 1007 aaPredicted RBP13.49□□□□□ -0.25
PTP4A1-207ENST00000639568 LRRC37A2A6NM11 1700 aa13.49□□□□□ -0.25
PTP4A1-207ENST00000639568 ZNF236Q9UL36 1845 aa13.48□□□□□ -0.25
PTP4A1-207ENST00000639568 MYADML2A6NDP7 307 aa13.48□□□□□ -0.25
PTP4A1-207ENST00000639568 DCXO43602 365 aa13.48□□□□□ -0.25
PTP4A1-207ENST00000639568 FLOT1O75955 427 aa13.48□□□□□ -0.25
PTP4A1-207ENST00000639568 CST5P28325 142 aaPredicted RBP13.48□□□□□ -0.25
PTP4A1-207ENST00000639568 DSG3P32926 999 aa13.48□□□□□ -0.25
PTP4A1-207ENST00000639568 ZNF792Q3KQV3 632 aa13.48□□□□□ -0.25
PTP4A1-207ENST00000639568 EPOPA6NHQ4 379 aa13.47□□□□□ -0.25
PTP4A1-207ENST00000639568 KIF28PB7ZC32 967 aa13.47□□□□□ -0.25
PTP4A1-207ENST00000639568 CD4P01730 458 aa13.47□□□□□ -0.25
PTP4A1-207ENST00000639568 UBTFL1P0CB47 393 aaPredicted RBP13.47□□□□□ -0.25
PTP4A1-207ENST00000639568 MFSD14AQ96MC6 490 aa13.47□□□□□ -0.25
PTP4A1-207ENST00000639568 PRRC2BQ5JSZ5 2229 aaKnown RBP13.47□□□□□ -0.25
PTP4A1-207ENST00000639568 PTPRCP08575 1304 aa13.46□□□□□ -0.25
PTP4A1-207ENST00000639568 UMODL1Q5DID0 1318 aa13.46□□□□□ -0.25
PTP4A1-207ENST00000639568 MPHOSPH10O00566 681 aaKnown RBP13.46□□□□□ -0.25
PTP4A1-207ENST00000639568 USP5P45974 858 aa13.46□□□□□ -0.25
PTP4A1-207ENST00000639568 TFCP2Q12800 502 aa13.46□□□□□ -0.25
PTP4A1-207ENST00000639568 GRB10Q13322 594 aa13.46□□□□□ -0.25
PTP4A1-207ENST00000639568 TTC6Q86TZ1 520 aa13.46□□□□□ -0.25
PTP4A1-207ENST00000639568 MSL3Q8N5Y2 521 aaKnown RBP13.46□□□□□ -0.25
PTP4A1-207ENST00000639568 ATG4CQ96DT6 458 aa13.46□□□□□ -0.25
PTP4A1-207ENST00000639568 PRKRIP1Q9H875 184 aaPredicted RBP13.46□□□□□ -0.25
PTP4A1-207ENST00000639568 HDAC5Q9UQL6 1122 aa13.46□□□□□ -0.25
PTP4A1-207ENST00000639568 PFKMP08237 780 aa13.45□□□□□ -0.26
PTP4A1-207ENST00000639568 ACTN1P12814 892 aa13.45□□□□□ -0.26
PTP4A1-207ENST00000639568 KCNA5P22460 613 aa13.45□□□□□ -0.26
PTP4A1-207ENST00000639568 TAP1Q03518 808 aa13.45□□□□□ -0.26
PTP4A1-207ENST00000639568 SEPT2Q15019 361 aa13.45□□□□□ -0.26
PTP4A1-207ENST00000639568 EHD4Q9H223 541 aa13.45□□□□□ -0.26
PTP4A1-207ENST00000639568 UBE2ZQ9H832 354 aaPredicted RBP13.45□□□□□ -0.26
PTP4A1-207ENST00000639568 COPRSQ9NQ92 184 aa13.45□□□□□ -0.26
PTP4A1-207ENST00000639568 ZNF536O15090 1300 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms