RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 HTATIP2Q9BUP3 242 aa20.46■□□□□ 0.87
HMGN3-203ENST00000620514 CLIP2Q9UDT6 1046 aa20.46■□□□□ 0.87
HMGN3-203ENST00000620514 SUPT16HQ9Y5B9 1047 aaKnown RBP20.46■□□□□ 0.87
HMGN3-203ENST00000620514 HOXC6P09630 235 aa20.45■□□□□ 0.86
HMGN3-203ENST00000620514 CAPN2P17655 700 aa20.45■□□□□ 0.86
HMGN3-203ENST00000620514 MNX1P50219 401 aaPredicted RBP20.45■□□□□ 0.86
HMGN3-203ENST00000620514 NCAPG2Q86XI2 1143 aa20.45■□□□□ 0.86
HMGN3-203ENST00000620514 CEP95Q96GE4 821 aa20.45■□□□□ 0.86
HMGN3-203ENST00000620514 FAM227BQ96M60 508 aa20.45■□□□□ 0.86
HMGN3-203ENST00000620514 ZNF287Q9HBT7 754 aa20.45■□□□□ 0.86
HMGN3-203ENST00000620514 ADAMTS5Q9UNA0 930 aa20.45■□□□□ 0.86
HMGN3-203ENST00000620514 F5H6K3 240 aa20.44■□□□□ 0.86
HMGN3-203ENST00000620514 NDUFB10O96000 172 aa20.44■□□□□ 0.86
HMGN3-203ENST00000620514 ADORA2AP29274 412 aa20.44■□□□□ 0.86
HMGN3-203ENST00000620514 KLRC3Q07444 240 aa20.44■□□□□ 0.86
HMGN3-203ENST00000620514 FAM47AQ5JRC9 791 aa20.44■□□□□ 0.86
HMGN3-203ENST00000620514 INCENPQ9NQS7 918 aa20.44■□□□□ 0.86
HMGN3-203ENST00000620514 OGDHLQ9ULD0 1010 aa20.44■□□□□ 0.86
HMGN3-203ENST00000620514 PPP1R9AQ9ULJ8 1098 aa20.44■□□□□ 0.86
HMGN3-203ENST00000620514 A0A0D9SFI3 127 aa20.43■□□□□ 0.86
HMGN3-203ENST00000620514 VWA5AO00534 786 aa20.43■□□□□ 0.86
HMGN3-203ENST00000620514 COBLO75128 1261 aa20.43■□□□□ 0.86
HMGN3-203ENST00000620514 CTDSPL2Q05D32 466 aa20.43■□□□□ 0.86
HMGN3-203ENST00000620514 PDE4BQ07343 736 aa20.43■□□□□ 0.86
HMGN3-203ENST00000620514 MFSD14CQ5VZR4 134 aa20.43■□□□□ 0.86
HMGN3-203ENST00000620514 DPP9Q86TI2 863 aa20.43■□□□□ 0.86
HMGN3-203ENST00000620514 CHD1LQ86WJ1 897 aa20.43■□□□□ 0.86
HMGN3-203ENST00000620514 LRRC47Q8N1G4 583 aaKnown RBP20.43■□□□□ 0.86
HMGN3-203ENST00000620514 ANKLE1Q8NAG6 615 aa20.43■□□□□ 0.86
HMGN3-203ENST00000620514 NEDD1Q8NHV4 660 aa20.43■□□□□ 0.86
HMGN3-203ENST00000620514 MROH8Q9H579 483 aa20.43■□□□□ 0.86
HMGN3-203ENST00000620514 HELLSQ9NRZ9 838 aa20.43■□□□□ 0.86
HMGN3-203ENST00000620514 MTMR4Q9NYA4 1195 aa20.43■□□□□ 0.86
HMGN3-203ENST00000620514 TACC3Q9Y6A5 838 aa20.43■□□□□ 0.86
HMGN3-203ENST00000620514 COL11A1P12107 1806 aaPredicted RBP20.43■□□□□ 0.86
HMGN3-203ENST00000620514 CEP290O15078 2479 aa20.42■□□□□ 0.86
HMGN3-203ENST00000620514 TRIM6-TRIM34B2RNG4 842 aa20.42■□□□□ 0.86
HMGN3-203ENST00000620514 STRNO43815 780 aa20.42■□□□□ 0.86
HMGN3-203ENST00000620514 SLC3A2P08195 630 aaKnown RBP20.42■□□□□ 0.86
HMGN3-203ENST00000620514 CYP2C19P33261 490 aa20.42■□□□□ 0.86
HMGN3-203ENST00000620514 TFAP4Q01664 338 aa20.42■□□□□ 0.86
HMGN3-203ENST00000620514 NUCB1Q02818 461 aa20.42■□□□□ 0.86
HMGN3-203ENST00000620514 HABP4Q5JVS0 413 aaKnown RBP20.42■□□□□ 0.86
HMGN3-203ENST00000620514 LHX8Q68G74 356 aa20.42■□□□□ 0.86
HMGN3-203ENST00000620514 NECAB2Q7Z6G3 386 aa20.42■□□□□ 0.86
HMGN3-203ENST00000620514 PLEKHM2Q8IWE5 1019 aa20.42■□□□□ 0.86
HMGN3-203ENST00000620514 REPS2Q8NFH8 660 aa20.42■□□□□ 0.86
HMGN3-203ENST00000620514 PLIN4Q96Q06 1357 aa20.42■□□□□ 0.86
HMGN3-203ENST00000620514 ZNF236Q9UL36 1845 aa20.41■□□□□ 0.86
HMGN3-203ENST00000620514 IGHA2P01877 340 aa20.41■□□□□ 0.86
HMGN3-203ENST00000620514 TSPY3P0CV98 308 aa20.41■□□□□ 0.86
HMGN3-203ENST00000620514 TSPY8P0CW00 308 aa20.41■□□□□ 0.86
HMGN3-203ENST00000620514 NMIQ13287 307 aaPredicted RBP20.41■□□□□ 0.86
HMGN3-203ENST00000620514 MKL1Q969V6 931 aa20.41■□□□□ 0.86
HMGN3-203ENST00000620514 RILPL2Q969X0 211 aa20.41■□□□□ 0.86
HMGN3-203ENST00000620514 SLF1Q9BQI6 1058 aa20.41■□□□□ 0.86
HMGN3-203ENST00000620514 ZNF214Q9UL59 606 aaPredicted RBP20.41■□□□□ 0.86
HMGN3-203ENST00000620514 COLQQ9Y215 455 aaPredicted RBP20.41■□□□□ 0.86
HMGN3-203ENST00000620514 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.41■□□□□ 0.86
HMGN3-203ENST00000620514 MYH4Q9Y623 1939 aa20.41■□□□□ 0.86
HMGN3-203ENST00000620514 SLC25A27O95847 323 aa20.4■□□□□ 0.86
HMGN3-203ENST00000620514 TTLL1O95922 423 aa20.4■□□□□ 0.86
HMGN3-203ENST00000620514 STAT3P40763 770 aa20.4■□□□□ 0.86
HMGN3-203ENST00000620514 MCMDC2Q4G0Z9 681 aa20.4■□□□□ 0.86
HMGN3-203ENST00000620514 ZNF589Q86UQ0 364 aaPredicted RBP20.4■□□□□ 0.86
HMGN3-203ENST00000620514 TRPV1Q8NER1 839 aa20.4■□□□□ 0.86
HMGN3-203ENST00000620514 NBPF3Q9H094 633 aa20.4■□□□□ 0.86
HMGN3-203ENST00000620514 RIOX2Q8IUF8 465 aa20.39■□□□□ 0.85
HMGN3-203ENST00000620514 ALPK3Q96L96 1907 aa20.39■□□□□ 0.85
HMGN3-203ENST00000620514 EVI5O60447 810 aa20.38■□□□□ 0.85
HMGN3-203ENST00000620514 FCER1AP12319 257 aa20.38■□□□□ 0.85
HMGN3-203ENST00000620514 CNGA1P29973 690 aa20.38■□□□□ 0.85
HMGN3-203ENST00000620514 ALX1Q15699 326 aa20.38■□□□□ 0.85
HMGN3-203ENST00000620514 OLFML2BQ68BL8 750 aa20.38■□□□□ 0.85
HMGN3-203ENST00000620514 SLFN13Q68D06 897 aa20.38■□□□□ 0.85
HMGN3-203ENST00000620514 ABRAQ8N0Z2 381 aa20.38■□□□□ 0.85
HMGN3-203ENST00000620514 GMCL1P1Q8NEA9 526 aa20.38■□□□□ 0.85
HMGN3-203ENST00000620514 CHMP4CQ96CF2 233 aa20.38■□□□□ 0.85
HMGN3-203ENST00000620514 OSBPL3Q9H4L5 887 aa20.38■□□□□ 0.85
HMGN3-203ENST00000620514 C11orf49Q9H6J7 331 aa20.38■□□□□ 0.85
HMGN3-203ENST00000620514 ANAPC4Q9UJX5 808 aa20.38■□□□□ 0.85
HMGN3-203ENST00000620514 NR2E3Q9Y5X4 410 aa20.38■□□□□ 0.85
HMGN3-203ENST00000620514 NMT2O60551 498 aa20.37■□□□□ 0.85
HMGN3-203ENST00000620514 FGAP02671 866 aa20.37■□□□□ 0.85
HMGN3-203ENST00000620514 HSPD1P10809 573 aaKnown RBP20.37■□□□□ 0.85
HMGN3-203ENST00000620514 CYBAP13498 195 aa20.37■□□□□ 0.85
HMGN3-203ENST00000620514 IRX6P78412 446 aaPredicted RBP20.37■□□□□ 0.85
HMGN3-203ENST00000620514 CHRDL2Q6WN34 429 aa20.37■□□□□ 0.85
HMGN3-203ENST00000620514 PRPF38AQ8NAV1 312 aaKnown RBP20.37■□□□□ 0.85
HMGN3-203ENST00000620514 MMP19Q99542 508 aa20.37■□□□□ 0.85
HMGN3-203ENST00000620514 IL17RBQ9NRM6 502 aa20.37■□□□□ 0.85
HMGN3-203ENST00000620514 DDX20Q9UHI6 824 aaKnown RBP20.37■□□□□ 0.85
HMGN3-203ENST00000620514 SYNPO2Q9UMS6 1093 aa20.37■□□□□ 0.85
HMGN3-203ENST00000620514 PFASO15067 1338 aa20.36■□□□□ 0.85
HMGN3-203ENST00000620514 TSPY2A6NKD2 308 aa20.36■□□□□ 0.85
HMGN3-203ENST00000620514 PGK2P07205 417 aa20.36■□□□□ 0.85
HMGN3-203ENST00000620514 SDSP20132 328 aa20.36■□□□□ 0.85
HMGN3-203ENST00000620514 TICAM2Q86XR7 235 aa20.36■□□□□ 0.85
HMGN3-203ENST00000620514 KIFC2Q96AC6 838 aa20.36■□□□□ 0.85
HMGN3-203ENST00000620514 MAML3Q96JK9 1138 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms