RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 TAF1P21675 1872 aa13.35□□□□□ -0.27
C11orf54-215ENST00000617482 TSPY2A6NKD2 308 aa13.35□□□□□ -0.27
C11orf54-215ENST00000617482 RNF225M0QZC1 329 aaPredicted RBP13.35□□□□□ -0.27
C11orf54-215ENST00000617482 ABL1P00519 1130 aa13.35□□□□□ -0.27
C11orf54-215ENST00000617482 SF3B3Q15393 1217 aaKnown RBP13.35□□□□□ -0.27
C11orf54-215ENST00000617482 ZNF569Q5MCW4 686 aa13.35□□□□□ -0.27
C11orf54-215ENST00000617482 CCDC24Q8N4L8 307 aa13.35□□□□□ -0.27
C11orf54-215ENST00000617482 NAA15Q9BXJ9 866 aaKnown RBP13.35□□□□□ -0.27
C11orf54-215ENST00000617482 PUF60Q9UHX1 559 aaKnown RBP13.35□□□□□ -0.27
C11orf54-215ENST00000617482 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.35□□□□□ -0.27
C11orf54-215ENST00000617482 BAZ2AQ9UIF9 1905 aaKnown RBP13.34□□□□□ -0.27
C11orf54-215ENST00000617482 KIF5CO60282 957 aa13.34□□□□□ -0.27
C11orf54-215ENST00000617482 PCP11498 1178 aaKnown RBP13.34□□□□□ -0.27
C11orf54-215ENST00000617482 PFKFB3Q16875 520 aaPredicted RBP13.34□□□□□ -0.27
C11orf54-215ENST00000617482 FBXO33Q7Z6M2 555 aa13.34□□□□□ -0.27
C11orf54-215ENST00000617482 ACRBPQ8NEB7 543 aa13.34□□□□□ -0.27
C11orf54-215ENST00000617482 RASGRP4Q8TDF6 673 aa13.34□□□□□ -0.27
C11orf54-215ENST00000617482 GOLGA1Q92805 767 aa13.34□□□□□ -0.27
C11orf54-215ENST00000617482 GPKOWQ92917 476 aaPredicted RBP eCLIP13.34□□□□□ -0.27
C11orf54-215ENST00000617482 CRNKL1Q9BZJ0 848 aaKnown RBP13.34□□□□□ -0.27
C11orf54-215ENST00000617482 TAB2Q9NYJ8 693 aa13.34□□□□□ -0.27
C11orf54-215ENST00000617482 MYH14Q7Z406 1995 aaKnown RBP13.34□□□□□ -0.27
C11orf54-215ENST00000617482 DUOX1Q9NRD9 1551 aa13.34□□□□□ -0.27
C11orf54-215ENST00000617482 SEMA3EO15041 775 aa13.34□□□□□ -0.27
C11orf54-215ENST00000617482 TBC1D8O95759 1140 aa13.34□□□□□ -0.27
C11orf54-215ENST00000617482 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.34□□□□□ -0.27
C11orf54-215ENST00000617482 RASGRP2Q7LDG7 609 aa13.34□□□□□ -0.27
C11orf54-215ENST00000617482 CNGA4Q8IV77 575 aa13.34□□□□□ -0.27
C11orf54-215ENST00000617482 NELFBQ8WX92 580 aa13.34□□□□□ -0.27
C11orf54-215ENST00000617482 RABGGTAQ92696 567 aa13.34□□□□□ -0.27
C11orf54-215ENST00000617482 ZCCHC17Q9NP64 241 aaKnown RBP13.34□□□□□ -0.27
C11orf54-215ENST00000617482 MTMR7Q9Y216 660 aa13.34□□□□□ -0.27
C11orf54-215ENST00000617482 GDAQ9Y2T3 454 aa13.34□□□□□ -0.27
C11orf54-215ENST00000617482 PLCH1Q4KWH8 1693 aa13.34□□□□□ -0.27
C11orf54-215ENST00000617482 MYH6P13533 1939 aa13.33□□□□□ -0.27
C11orf54-215ENST00000617482 ORC4O43929 436 aa13.33□□□□□ -0.27
C11orf54-215ENST00000617482 USP17L8P0C7I0 530 aa13.33□□□□□ -0.27
C11orf54-215ENST00000617482 PAK1Q13153 545 aa13.33□□□□□ -0.27
C11orf54-215ENST00000617482 NUP88Q99567 741 aaPredicted RBP13.33□□□□□ -0.27
C11orf54-215ENST00000617482 ARFGAP3Q9NP61 516 aa13.33□□□□□ -0.27
C11orf54-215ENST00000617482 MCM9Q9NXL9 1143 aa13.33□□□□□ -0.27
C11orf54-215ENST00000617482 GTPBP6O43824 516 aaPredicted RBP13.33□□□□□ -0.28
C11orf54-215ENST00000617482 TFRCP02786 760 aaKnown RBP13.33□□□□□ -0.28
C11orf54-215ENST00000617482 RPN1P04843 607 aaKnown RBP13.33□□□□□ -0.28
C11orf54-215ENST00000617482 HIBADHP31937 336 aaKnown RBP13.33□□□□□ -0.28
C11orf54-215ENST00000617482 TXLNAP40222 546 aa13.33□□□□□ -0.28
C11orf54-215ENST00000617482 CHMP4BP1P59074 171 aa13.33□□□□□ -0.28
C11orf54-215ENST00000617482 KIF4BQ2VIQ3 1234 aa13.33□□□□□ -0.28
C11orf54-215ENST00000617482 CLEC4GQ6UXB4 293 aa13.33□□□□□ -0.28
C11orf54-215ENST00000617482 LIMA1Q9UHB6 759 aaKnown RBP13.33□□□□□ -0.28
C11orf54-215ENST00000617482 RWDD2AQ9UIY3 292 aa13.33□□□□□ -0.28
C11orf54-215ENST00000617482 CACNA1SQ13698 1873 aa13.33□□□□□ -0.28
C11orf54-215ENST00000617482 ROBO1Q9Y6N7 1651 aa13.32□□□□□ -0.28
C11orf54-215ENST00000617482 LRRC10BA6NIK2 292 aa13.32□□□□□ -0.28
C11orf54-215ENST00000617482 KCNJ18B7U540 433 aa13.32□□□□□ -0.28
C11orf54-215ENST00000617482 PRCPP42785 496 aa13.32□□□□□ -0.28
C11orf54-215ENST00000617482 TRAPPC10P48553 1259 aa13.32□□□□□ -0.28
C11orf54-215ENST00000617482 COPB1P53618 953 aaKnown RBP13.32□□□□□ -0.28
C11orf54-215ENST00000617482 RPS8P62241 208 aaKnown RBP13.32□□□□□ -0.28
C11orf54-215ENST00000617482 ERVK-24P63145 666 aa13.32□□□□□ -0.28
C11orf54-215ENST00000617482 KCNJ12Q14500 433 aa13.32□□□□□ -0.28
C11orf54-215ENST00000617482 TCP11X2Q5H9J9 407 aa13.32□□□□□ -0.28
C11orf54-215ENST00000617482 TBC1D9BQ66K14 1250 aa13.32□□□□□ -0.28
C11orf54-215ENST00000617482 RCSD1Q6JBY9 416 aa13.32□□□□□ -0.28
C11orf54-215ENST00000617482 STAG2Q8N3U4 1231 aa13.32□□□□□ -0.28
C11orf54-215ENST00000617482 ZBTB9Q96C00 473 aa13.32□□□□□ -0.28
C11orf54-215ENST00000617482 PLIN2Q99541 437 aa13.32□□□□□ -0.28
C11orf54-215ENST00000617482 ATP8A2Q9NTI2 1148 aa13.32□□□□□ -0.28
C11orf54-215ENST00000617482 ABHD10Q9NUJ1 306 aa13.32□□□□□ -0.28
C11orf54-215ENST00000617482 SPATA31A1Q5TZJ5 1347 aa13.32□□□□□ -0.28
C11orf54-215ENST00000617482 FAM205AQ6ZU69 1335 aa13.32□□□□□ -0.28
C11orf54-215ENST00000617482 PP2D1A8MPX8 630 aa13.32□□□□□ -0.28
C11orf54-215ENST00000617482 STAT6P42226 847 aa13.32□□□□□ -0.28
C11orf54-215ENST00000617482 TFAP4Q01664 338 aa13.32□□□□□ -0.28
C11orf54-215ENST00000617482 ZNF658Q5TYW1 1059 aaPredicted RBP13.32□□□□□ -0.28
C11orf54-215ENST00000617482 TXNRD3Q86VQ6 643 aa13.32□□□□□ -0.28
C11orf54-215ENST00000617482 BLIDQ8IZY5 108 aa13.32□□□□□ -0.28
C11orf54-215ENST00000617482 RASSF8Q8NHQ8 419 aa13.32□□□□□ -0.28
C11orf54-215ENST00000617482 PHLPP1O60346 1717 aa13.31□□□□□ -0.28
C11orf54-215ENST00000617482 TRIM49BA6NDI0 452 aa13.31□□□□□ -0.28
C11orf54-215ENST00000617482 PES1O00541 588 aaKnown RBP13.31□□□□□ -0.28
C11orf54-215ENST00000617482 UBXN1Q04323 297 aa13.31□□□□□ -0.28
C11orf54-215ENST00000617482 TMEM132AQ24JP5 1023 aa13.31□□□□□ -0.28
C11orf54-215ENST00000617482 SRGAP1Q7Z6B7 1085 aa13.31□□□□□ -0.28
C11orf54-215ENST00000617482 SLC35F6Q8N357 371 aa13.31□□□□□ -0.28
C11orf54-215ENST00000617482 C4orf32Q8N8J7 132 aa13.31□□□□□ -0.28
C11orf54-215ENST00000617482 LINC00116Q8NCU8 138 aa13.31□□□□□ -0.28
C11orf54-215ENST00000617482 DYNLL2Q96FJ2 89 aa13.31□□□□□ -0.28
C11orf54-215ENST00000617482 CDCA7Q9BWT1 371 aaPredicted RBP13.31□□□□□ -0.28
C11orf54-215ENST00000617482 KAT14Q9H8E8 782 aa13.31□□□□□ -0.28
C11orf54-215ENST00000617482 CDC23Q9UJX2 597 aa13.31□□□□□ -0.28
C11orf54-215ENST00000617482 ITIH6Q6UXX5 1313 aa13.31□□□□□ -0.28
C11orf54-215ENST00000617482 CTAGE9A4FU28 777 aa13.31□□□□□ -0.28
C11orf54-215ENST00000617482 KIF5BP33176 963 aa13.31□□□□□ -0.28
C11orf54-215ENST00000617482 KRT9P35527 623 aa13.31□□□□□ -0.28
C11orf54-215ENST00000617482 SMC1AQ14683 1233 aaKnown RBP13.31□□□□□ -0.28
C11orf54-215ENST00000617482 TMTC1Q8IUR5 882 aa13.31□□□□□ -0.28
C11orf54-215ENST00000617482 ANKRD20A12PQ8NF67 263 aa13.31□□□□□ -0.28
C11orf54-215ENST00000617482 CCDC51Q96ER9 411 aa13.31□□□□□ -0.28
C11orf54-215ENST00000617482 SLF1Q9BQI6 1058 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms