RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 XBP1P17861 261 aa7.47□□□□□ -1.21
LMO3-235ENST00000616247 GBP2P32456 591 aaPredicted RBP7.47□□□□□ -1.21
LMO3-235ENST00000616247 CLNS1AP54105 237 aaKnown RBP7.47□□□□□ -1.21
LMO3-235ENST00000616247 MDM2Q00987 491 aaPredicted RBP7.47□□□□□ -1.21
LMO3-235ENST00000616247 SF3B2Q13435 895 aaKnown RBP7.47□□□□□ -1.21
LMO3-235ENST00000616247 TMEM132AQ24JP5 1023 aa7.47□□□□□ -1.21
LMO3-235ENST00000616247 KCNV1Q6PIU1 500 aa7.47□□□□□ -1.21
LMO3-235ENST00000616247 ATG9AQ7Z3C6 839 aa7.47□□□□□ -1.21
LMO3-235ENST00000616247 CCDC43Q96MW1 224 aaKnown RBP7.47□□□□□ -1.21
LMO3-235ENST00000616247 LACRTQ9GZZ8 138 aa7.47□□□□□ -1.21
LMO3-235ENST00000616247 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.47□□□□□ -1.21
LMO3-235ENST00000616247 FAM184BQ9ULE4 1060 aa7.47□□□□□ -1.21
LMO3-235ENST00000616247 CCDC196A0A1B0GTZ2 297 aa7.46□□□□□ -1.21
LMO3-235ENST00000616247 FAM170AA1A519 330 aa7.46□□□□□ -1.21
LMO3-235ENST00000616247 GOLGA6L10A6NI86 522 aa7.46□□□□□ -1.21
LMO3-235ENST00000616247 ACTN4O43707 911 aaKnown RBP7.46□□□□□ -1.21
LMO3-235ENST00000616247 CABP4P57796 275 aa7.46□□□□□ -1.21
LMO3-235ENST00000616247 SPAG1Q07617 926 aa7.46□□□□□ -1.21
LMO3-235ENST00000616247 TBC1D8BQ0IIM8 1120 aa7.46□□□□□ -1.21
LMO3-235ENST00000616247 C8orf74Q6P047 294 aa7.46□□□□□ -1.21
LMO3-235ENST00000616247 MFSD6Q6ZSS7 791 aa7.46□□□□□ -1.21
LMO3-235ENST00000616247 CCDC121Q6ZUS5 278 aa7.46□□□□□ -1.21
LMO3-235ENST00000616247 ZSWIM5Q9P217 1185 aa7.46□□□□□ -1.21
LMO3-235ENST00000616247 A0A087X0B3 334 aa7.46□□□□□ -1.22
LMO3-235ENST00000616247 B4DLN1 442 aa7.46□□□□□ -1.22
LMO3-235ENST00000616247 NCK2O43639 380 aa7.46□□□□□ -1.22
LMO3-235ENST00000616247 USO1O60763 962 aaKnown RBP7.46□□□□□ -1.22
LMO3-235ENST00000616247 TACC1O75410 805 aa7.46□□□□□ -1.22
LMO3-235ENST00000616247 MMP1P03956 469 aa7.46□□□□□ -1.22
LMO3-235ENST00000616247 VAV2P52735 878 aa7.46□□□□□ -1.22
LMO3-235ENST00000616247 DPYDQ12882 1025 aa7.46□□□□□ -1.22
LMO3-235ENST00000616247 TYW1BQ6NUM6 668 aa7.46□□□□□ -1.22
LMO3-235ENST00000616247 LDHAL6AQ6ZMR3 332 aa7.46□□□□□ -1.22
LMO3-235ENST00000616247 TBC1D31Q96DN5 1066 aa7.46□□□□□ -1.22
LMO3-235ENST00000616247 FAM89AQ96GI7 184 aa7.46□□□□□ -1.22
LMO3-235ENST00000616247 VIPAS39Q9H9C1 493 aa7.46□□□□□ -1.22
LMO3-235ENST00000616247 MLXIPQ9HAP2 919 aa7.46□□□□□ -1.22
LMO3-235ENST00000616247 MYO1AQ9UBC5 1043 aa7.46□□□□□ -1.22
LMO3-235ENST00000616247 LRWD1Q9UFC0 647 aa7.46□□□□□ -1.22
LMO3-235ENST00000616247 V9GY48 417 aaPredicted RBP7.46□□□□□ -1.22
LMO3-235ENST00000616247 PREX1Q8TCU6 1659 aa7.46□□□□□ -1.22
LMO3-235ENST00000616247 TMEM131LA2VDJ0 1609 aa7.46□□□□□ -1.22
LMO3-235ENST00000616247 CEMIPQ8WUJ3 1361 aa7.46□□□□□ -1.22
LMO3-235ENST00000616247 GOLGA8KD6RF30 607 aa7.46□□□□□ -1.22
LMO3-235ENST00000616247 AGPSO00116 658 aa7.46□□□□□ -1.22
LMO3-235ENST00000616247 BUB1O43683 1085 aa7.46□□□□□ -1.22
LMO3-235ENST00000616247 MOCS3O95396 460 aa7.46□□□□□ -1.22
LMO3-235ENST00000616247 GPTP24298 496 aa7.46□□□□□ -1.22
LMO3-235ENST00000616247 CUL4BQ13620 913 aa7.46□□□□□ -1.22
LMO3-235ENST00000616247 TDRD12Q587J7 1177 aaKnown RBP7.46□□□□□ -1.22
LMO3-235ENST00000616247 TRAPPC11Q7Z392 1133 aa7.46□□□□□ -1.22
LMO3-235ENST00000616247 MIGA1Q8NAN2 632 aa7.46□□□□□ -1.22
LMO3-235ENST00000616247 EHBP1Q8NDI1 1231 aa7.46□□□□□ -1.22
LMO3-235ENST00000616247 MMRN2Q9H8L6 949 aa7.46□□□□□ -1.22
LMO3-235ENST00000616247 ARMT1Q9H993 441 aa7.46□□□□□ -1.22
LMO3-235ENST00000616247 VEZTQ9HBM0 779 aa7.46□□□□□ -1.22
LMO3-235ENST00000616247 AGPAT5Q9NUQ2 364 aa7.46□□□□□ -1.22
LMO3-235ENST00000616247 NFU1Q9UMS0 254 aa7.46□□□□□ -1.22
LMO3-235ENST00000616247 SRPRBQ9Y5M8 271 aaKnown RBP7.46□□□□□ -1.22
LMO3-235ENST00000616247 SLC4A4Q9Y6R1 1079 aa7.46□□□□□ -1.22
LMO3-235ENST00000616247 PALLDQ8WX93 1383 aa7.45□□□□□ -1.22
LMO3-235ENST00000616247 ZNF532Q9HCE3 1301 aa7.45□□□□□ -1.22
LMO3-235ENST00000616247 PARP1P09874 1014 aaKnown RBP7.45□□□□□ -1.22
LMO3-235ENST00000616247 GUCY2DQ02846 1103 aa7.45□□□□□ -1.22
LMO3-235ENST00000616247 NEDD9Q14511 834 aa7.45□□□□□ -1.22
LMO3-235ENST00000616247 CCDC40Q4G0X9 1142 aa7.45□□□□□ -1.22
LMO3-235ENST00000616247 TCP11X2Q5H9J9 407 aa7.45□□□□□ -1.22
LMO3-235ENST00000616247 NFRKBQ6P4R8 1299 aa7.45□□□□□ -1.22
LMO3-235ENST00000616247 TOM1L2Q6ZVM7 507 aa7.45□□□□□ -1.22
LMO3-235ENST00000616247 SP7Q8TDD2 431 aaPredicted RBP7.45□□□□□ -1.22
LMO3-235ENST00000616247 TANGO6Q9C0B7 1094 aa7.45□□□□□ -1.22
LMO3-235ENST00000616247 IQSEC3Q9UPP2 1182 aaPredicted RBP7.45□□□□□ -1.22
LMO3-235ENST00000616247 JCADQ9P266 1359 aa7.45□□□□□ -1.22
LMO3-235ENST00000616247 UTYO14607 1347 aa7.45□□□□□ -1.22
LMO3-235ENST00000616247 XRN1Q8IZH2 1706 aaKnown RBP7.45□□□□□ -1.22
LMO3-235ENST00000616247 MEFVO15553 781 aaPredicted RBP7.45□□□□□ -1.22
LMO3-235ENST00000616247 PPP1R12BO60237 982 aaPredicted RBP7.45□□□□□ -1.22
LMO3-235ENST00000616247 MBD4O95243 580 aa7.45□□□□□ -1.22
LMO3-235ENST00000616247 KCNA6P17658 529 aa7.45□□□□□ -1.22
LMO3-235ENST00000616247 PEX19P40855 299 aa7.45□□□□□ -1.22
LMO3-235ENST00000616247 STAT6P42226 847 aa7.45□□□□□ -1.22
LMO3-235ENST00000616247 AARSP49588 968 aaKnown RBP eCLIP7.45□□□□□ -1.22
LMO3-235ENST00000616247 KLK7P49862 253 aa7.45□□□□□ -1.22
LMO3-235ENST00000616247 AMPD2Q01433 879 aa7.45□□□□□ -1.22
LMO3-235ENST00000616247 ARID5AQ03989 594 aa7.45□□□□□ -1.22
LMO3-235ENST00000616247 PTGDRQ13258 359 aa7.45□□□□□ -1.22
LMO3-235ENST00000616247 IFIT5Q13325 482 aaKnown RBP7.45□□□□□ -1.22
LMO3-235ENST00000616247 SLC4A8Q2Y0W8 1093 aa7.45□□□□□ -1.22
LMO3-235ENST00000616247 SWT1Q5T5J6 900 aaKnown RBP7.45□□□□□ -1.22
LMO3-235ENST00000616247 KLHL7Q8IXQ5 586 aa7.45□□□□□ -1.22
LMO3-235ENST00000616247 TSEN2Q8NCE0 465 aaKnown RBP7.45□□□□□ -1.22
LMO3-235ENST00000616247 TMEM87BQ96K49 555 aa7.45□□□□□ -1.22
LMO3-235ENST00000616247 EPB41L5Q9HCM4 733 aa7.45□□□□□ -1.22
LMO3-235ENST00000616247 FAM207AQ9NSI2 230 aaPredicted RBP7.45□□□□□ -1.22
LMO3-235ENST00000616247 BAIAP2L1Q9UHR4 511 aa7.45□□□□□ -1.22
LMO3-235ENST00000616247 REXO2Q9Y3B8 237 aaKnown RBP7.45□□□□□ -1.22
LMO3-235ENST00000616247 NCAPD2Q15021 1401 aa7.45□□□□□ -1.22
LMO3-235ENST00000616247 PPP1R3GB7ZBB8 358 aa7.44□□□□□ -1.22
LMO3-235ENST00000616247 CHUKO15111 745 aa7.44□□□□□ -1.22
LMO3-235ENST00000616247 SKAP2O75563 359 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms