RNA–Protein interactions for RNA: ENST00000615513.4

CDKN1A-208, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKN1A, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-208ENST00000615513 TUBB4AP04350 444 aa16.78■□□□□ 0.28
CDKN1A-208ENST00000615513 TOP1P11387 765 aaKnown RBP16.78■□□□□ 0.28
CDKN1A-208ENST00000615513 VEGFAP15692 232 aaPredicted RBP16.78■□□□□ 0.28
CDKN1A-208ENST00000615513 DPYDQ12882 1025 aa16.78■□□□□ 0.28
CDKN1A-208ENST00000615513 SYCP1Q15431 976 aa16.78■□□□□ 0.28
CDKN1A-208ENST00000615513 USP17L1Q7RTZ2 530 aa16.78■□□□□ 0.28
CDKN1A-208ENST00000615513 STAG2Q8N3U4 1231 aa16.78■□□□□ 0.28
CDKN1A-208ENST00000615513 IQUBQ8NA54 791 aa16.78■□□□□ 0.28
CDKN1A-208ENST00000615513 GAKO14976 1311 aa16.78■□□□□ 0.28
CDKN1A-208ENST00000615513 PALM3A6NDB9 673 aaPredicted RBP16.78■□□□□ 0.28
CDKN1A-208ENST00000615513 ZNF827Q17R98 1081 aa16.78■□□□□ 0.28
CDKN1A-208ENST00000615513 E4F1Q66K89 784 aaPredicted RBP16.78■□□□□ 0.28
CDKN1A-208ENST00000615513 TEX11Q8IYF3 940 aa16.78■□□□□ 0.28
CDKN1A-208ENST00000615513 TBC1D16Q8TBP0 767 aa16.78■□□□□ 0.28
CDKN1A-208ENST00000615513 TMEM47Q9BQJ4 181 aa16.78■□□□□ 0.28
CDKN1A-208ENST00000615513 TMX1Q9H3N1 280 aa16.78■□□□□ 0.28
CDKN1A-208ENST00000615513 FAM205AQ6ZU69 1335 aa16.77■□□□□ 0.28
CDKN1A-208ENST00000615513 M0R2N6 131 aa16.77■□□□□ 0.28
CDKN1A-208ENST00000615513 CCP110O43303 1012 aa16.77■□□□□ 0.28
CDKN1A-208ENST00000615513 LONP1P36776 959 aaKnown RBP16.77■□□□□ 0.28
CDKN1A-208ENST00000615513 E2F4Q16254 413 aa16.77■□□□□ 0.28
CDKN1A-208ENST00000615513 NEDD1Q8NHV4 660 aa16.77■□□□□ 0.28
CDKN1A-208ENST00000615513 CDK11BP21127 795 aaKnown RBP16.76■□□□□ 0.27
CDKN1A-208ENST00000615513 MCM7P33993 719 aa16.76■□□□□ 0.27
CDKN1A-208ENST00000615513 AFMP43652 599 aa16.76■□□□□ 0.27
CDKN1A-208ENST00000615513 CDK8P49336 464 aa16.76■□□□□ 0.27
CDKN1A-208ENST00000615513 RHBDL3P58872 404 aa16.76■□□□□ 0.27
CDKN1A-208ENST00000615513 MFSD14BQ5SR56 506 aa16.76■□□□□ 0.27
CDKN1A-208ENST00000615513 SLC44A5Q8NCS7 719 aa16.76■□□□□ 0.27
CDKN1A-208ENST00000615513 INTS13Q9NVM9 706 aa16.76■□□□□ 0.27
CDKN1A-208ENST00000615513 TRMT1Q9NXH9 659 aaKnown RBP16.76■□□□□ 0.27
CDKN1A-208ENST00000615513 BARHL2Q9NY43 387 aa16.76■□□□□ 0.27
CDKN1A-208ENST00000615513 POLLQ9UGP5 575 aa16.76■□□□□ 0.27
CDKN1A-208ENST00000615513 SAP30BPQ9UHR5 308 aaKnown RBP16.76■□□□□ 0.27
CDKN1A-208ENST00000615513 FLT1P17948 1338 aa16.76■□□□□ 0.27
CDKN1A-208ENST00000615513 DDX60LQ5H9U9 1706 aaKnown RBP16.76■□□□□ 0.27
CDKN1A-208ENST00000615513 POLRMTO00411 1230 aaKnown RBP16.76■□□□□ 0.27
CDKN1A-208ENST00000615513 ZNF710Q8N1W2 664 aa16.76■□□□□ 0.27
CDKN1A-208ENST00000615513 C4orf32Q8N8J7 132 aa16.76■□□□□ 0.27
CDKN1A-208ENST00000615513 MED15Q96RN5 788 aa16.76■□□□□ 0.27
CDKN1A-208ENST00000615513 EYA3Q99504 573 aa16.76■□□□□ 0.27
CDKN1A-208ENST00000615513 SPZ1Q9BXG8 430 aa16.76■□□□□ 0.27
CDKN1A-208ENST00000615513 STX8Q9UNK0 236 aa16.76■□□□□ 0.27
CDKN1A-208ENST00000615513 SNED1Q8TER0 1413 aa16.75■□□□□ 0.27
CDKN1A-208ENST00000615513 CYTH3O43739 400 aa16.75■□□□□ 0.27
CDKN1A-208ENST00000615513 SMARCA1P28370 1054 aa16.75■□□□□ 0.27
CDKN1A-208ENST00000615513 DDR1Q08345 913 aa16.75■□□□□ 0.27
CDKN1A-208ENST00000615513 TBX2Q13207 712 aaPredicted RBP16.75■□□□□ 0.27
CDKN1A-208ENST00000615513 CUL4BQ13620 913 aa16.75■□□□□ 0.27
CDKN1A-208ENST00000615513 SPATA1Q5VX52 437 aa16.75■□□□□ 0.27
CDKN1A-208ENST00000615513 FCHSD1Q86WN1 690 aa16.75■□□□□ 0.27
CDKN1A-208ENST00000615513 KIF18AQ8NI77 898 aa16.75■□□□□ 0.27
CDKN1A-208ENST00000615513 GPKOWQ92917 476 aaPredicted RBP eCLIP16.75■□□□□ 0.27
CDKN1A-208ENST00000615513 SUGT1Q9Y2Z0 365 aa16.75■□□□□ 0.27
CDKN1A-208ENST00000615513 CCDC194A0A1B0GVG4 234 aa16.75■□□□□ 0.27
CDKN1A-208ENST00000615513 TMEM232C9JQI7 657 aa16.75■□□□□ 0.27
CDKN1A-208ENST00000615513 NOVP48745 357 aa16.75■□□□□ 0.27
CDKN1A-208ENST00000615513 IL17AQ16552 155 aa16.75■□□□□ 0.27
CDKN1A-208ENST00000615513 SLC35G1Q2M3R5 365 aa16.75■□□□□ 0.27
CDKN1A-208ENST00000615513 WWC2Q6AWC2 1192 aa16.75■□□□□ 0.27
CDKN1A-208ENST00000615513 AEBP2Q6ZN18 517 aaPredicted RBP16.75■□□□□ 0.27
CDKN1A-208ENST00000615513 SP8Q8IXZ3 490 aa16.75■□□□□ 0.27
CDKN1A-208ENST00000615513 TSC1Q92574 1164 aa16.75■□□□□ 0.27
CDKN1A-208ENST00000615513 PPP1R13BQ96KQ4 1090 aa16.75■□□□□ 0.27
CDKN1A-208ENST00000615513 CCDC94Q9BW85 323 aaPredicted RBP16.75■□□□□ 0.27
CDKN1A-208ENST00000615513 STXBP3O00186 592 aa16.74■□□□□ 0.27
CDKN1A-208ENST00000615513 ADAMTS3O15072 1205 aa16.74■□□□□ 0.27
CDKN1A-208ENST00000615513 TXLNAP40222 546 aa16.74■□□□□ 0.27
CDKN1A-208ENST00000615513 SPECC1LQ69YQ0 1117 aa16.74■□□□□ 0.27
CDKN1A-208ENST00000615513 TYW1BQ6NUM6 668 aa16.74■□□□□ 0.27
CDKN1A-208ENST00000615513 PDXDC2PQ6P474 469 aa16.74■□□□□ 0.27
CDKN1A-208ENST00000615513 TRMT44Q8IYL2 757 aaKnown RBP16.74■□□□□ 0.27
CDKN1A-208ENST00000615513 BAZ2BQ9UIF8 2168 aaKnown RBP16.74■□□□□ 0.27
CDKN1A-208ENST00000615513 LRRC37AA6NMS7 1700 aa16.74■□□□□ 0.27
CDKN1A-208ENST00000615513 LAD1O00515 517 aa16.73■□□□□ 0.27
CDKN1A-208ENST00000615513 GTPBP6O43824 516 aaPredicted RBP16.73■□□□□ 0.27
CDKN1A-208ENST00000615513 CCDC12Q8WUD4 166 aaPredicted RBP16.73■□□□□ 0.27
CDKN1A-208ENST00000615513 ANKRD7Q92527 254 aa16.73■□□□□ 0.27
CDKN1A-208ENST00000615513 ZNF592Q92610 1267 aa16.73■□□□□ 0.27
CDKN1A-208ENST00000615513 PCDHA6Q9UN73 950 aa16.73■□□□□ 0.27
CDKN1A-208ENST00000615513 PCDHA8Q9Y5H6 950 aa16.73■□□□□ 0.27
CDKN1A-208ENST00000615513 SYNRGQ9UMZ2 1314 aa16.73■□□□□ 0.27
CDKN1A-208ENST00000615513 A0A1B0GTH6 734 aa16.73■□□□□ 0.27
CDKN1A-208ENST00000615513 KLRF2D3W0D1 207 aa16.73■□□□□ 0.27
CDKN1A-208ENST00000615513 LTBP1Q14766 1721 aa16.73■□□□□ 0.27
CDKN1A-208ENST00000615513 NR1I3Q14994 352 aa16.73■□□□□ 0.27
CDKN1A-208ENST00000615513 HEATR3Q7Z4Q2 680 aa16.73■□□□□ 0.27
CDKN1A-208ENST00000615513 SMAP1Q8IYB5 467 aaPredicted RBP16.73■□□□□ 0.27
CDKN1A-208ENST00000615513 COA1Q9GZY4 146 aa16.73■□□□□ 0.27
CDKN1A-208ENST00000615513 SAMSN1Q9NSI8 373 aaKnown RBP16.73■□□□□ 0.27
CDKN1A-208ENST00000615513 CDK5RAP2Q96SN8 1893 aa16.72■□□□□ 0.27
CDKN1A-208ENST00000615513 PPP1R3GB7ZBB8 358 aa16.72■□□□□ 0.27
CDKN1A-208ENST00000615513 C6orf229H3BNL8 230 aa16.72■□□□□ 0.27
CDKN1A-208ENST00000615513 PPEF1O14829 653 aaPredicted RBP16.72■□□□□ 0.27
CDKN1A-208ENST00000615513 PARP1P09874 1014 aaKnown RBP16.72■□□□□ 0.27
CDKN1A-208ENST00000615513 CTAGE1Q96RT6 745 aa16.72■□□□□ 0.27
CDKN1A-208ENST00000615513 ARID3AQ99856 593 aa16.72■□□□□ 0.27
CDKN1A-208ENST00000615513 ZMYND12Q9H0C1 365 aa16.72■□□□□ 0.27
CDKN1A-208ENST00000615513 ARHGAP6O43182 974 aa16.72■□□□□ 0.27
CDKN1A-208ENST00000615513 CD44P16070 742 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms