RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 ARHGEF2Q92974 986 aaKnown RBP5.04□□□□□ -1.6
CHD9-221ENST00000615216 CCNL1Q9UK58 526 aaPredicted RBP5.04□□□□□ -1.6
CHD9-221ENST00000615216 NEURL1BA8MQ27 555 aa5.04□□□□□ -1.6
CHD9-221ENST00000615216 RNF40O75150 1001 aa5.04□□□□□ -1.6
CHD9-221ENST00000615216 PRPF6O94906 941 aaKnown RBP5.04□□□□□ -1.6
CHD9-221ENST00000615216 SEC24BO95487 1268 aa5.04□□□□□ -1.6
CHD9-221ENST00000615216 ATF7P17544 494 aaPredicted RBP5.04□□□□□ -1.6
CHD9-221ENST00000615216 MAGEA1P43355 309 aa5.04□□□□□ -1.6
CHD9-221ENST00000615216 CLNS1AP54105 237 aaKnown RBP5.04□□□□□ -1.6
CHD9-221ENST00000615216 CCDC38Q502W7 563 aa5.04□□□□□ -1.6
CHD9-221ENST00000615216 KRT26Q7Z3Y9 468 aa5.04□□□□□ -1.6
CHD9-221ENST00000615216 RSAD2Q8WXG1 361 aa5.04□□□□□ -1.6
CHD9-221ENST00000615216 HVCN1Q96D96 273 aa5.04□□□□□ -1.6
CHD9-221ENST00000615216 SUCLG2Q96I99 432 aa5.04□□□□□ -1.6
CHD9-221ENST00000615216 FAM81BQ96LP2 452 aa5.04□□□□□ -1.6
CHD9-221ENST00000615216 KRT12Q99456 494 aa5.04□□□□□ -1.6
CHD9-221ENST00000615216 TACC3Q9Y6A5 838 aa5.04□□□□□ -1.6
CHD9-221ENST00000615216 LMTK3Q96Q04 1460 aa5.04□□□□□ -1.6
CHD9-221ENST00000615216 UNC13BO14795 1591 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 LUC7L3O95232 432 aaKnown RBP5.03□□□□□ -1.6
CHD9-221ENST00000615216 TBC1D8O95759 1140 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 CTDSPL2Q05D32 466 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 NLRX1Q86UT6 975 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 PRPF31Q8WWY3 499 aaKnown RBP5.03□□□□□ -1.6
CHD9-221ENST00000615216 CARD6Q9BX69 1037 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 Q9H521 79 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 VCX3AQ9NNX9 186 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 MYO1AQ9UBC5 1043 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 KIF20BQ96Q89 1820 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 BRD1O95696 1058 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 GABPAQ06546 454 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 PDZD4Q76G19 769 aaPredicted RBP5.03□□□□□ -1.6
CHD9-221ENST00000615216 RAB20Q9NX57 234 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 KIAA1468Q9P260 1216 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 TRPC6Q9Y210 931 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 CD2APQ9Y5K6 639 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 PLEKHG1Q9ULL1 1385 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 GTPBP6O43824 516 aaPredicted RBP5.03□□□□□ -1.6
CHD9-221ENST00000615216 GAS7O60861 476 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 ALDH1B1P30837 517 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 PNOCQ13519 176 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 TSC1Q92574 1164 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 CSRNP1Q96S65 589 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 DBNDD2Q9BQY9 259 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 RIC8AQ9NPQ8 531 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 GPHNQ9NQX3 736 aaPredicted RBP5.03□□□□□ -1.6
CHD9-221ENST00000615216 SLC5A4Q9NY91 659 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 CLEC11AQ9Y240 323 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 H7C1D1 291 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 PER1O15534 1290 aaPredicted RBP5.03□□□□□ -1.6
CHD9-221ENST00000615216 THAP12O43422 761 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 KRT81Q14533 505 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 MYOCDQ8IZQ8 938 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 FAM71BQ8TC56 605 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 HAUS8Q9BT25 410 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 ZNF277Q9NRM2 450 aaPredicted RBP5.03□□□□□ -1.6
CHD9-221ENST00000615216 PKD2L1Q9P0L9 805 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 HARSP12081 509 aaKnown RBP5.03□□□□□ -1.6
CHD9-221ENST00000615216 LONP1P36776 959 aaKnown RBP5.03□□□□□ -1.6
CHD9-221ENST00000615216 LONRF2Q1L5Z9 754 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 TYW1BQ6NUM6 668 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 MCF2L2Q86YR7 1114 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 MRFAP1L1Q96HT8 127 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 HOMER3Q9NSC5 361 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 ABCC12Q96J65 1359 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 LMNB1P20700 586 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 DMP1Q13316 513 aaPredicted RBP5.03□□□□□ -1.6
CHD9-221ENST00000615216 RRAGAQ7L523 313 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 G2E3Q7L622 706 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 C2CD5Q86YS7 1000 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 OR8K1Q8NGG5 319 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 PHKBQ93100 1093 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 FAM89AQ96GI7 184 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 AS3MTQ9HBK9 375 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 AATKQ6ZMQ8 1374 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 ZNF500O60304 480 aaPredicted RBP5.03□□□□□ -1.6
CHD9-221ENST00000615216 CIAO1O76071 339 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 CPA1P15085 419 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 CMA1P23946 247 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 STAT1P42224 750 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 PDE6CP51160 858 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 DPP8Q6V1X1 898 aaPredicted RBP5.03□□□□□ -1.6
CHD9-221ENST00000615216 SND1Q7KZF4 910 aaKnown RBP eCLIP5.03□□□□□ -1.6
CHD9-221ENST00000615216 GPBP1Q86WP2 473 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 ZNF654Q8IZM8 581 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 TRIM11Q96F44 468 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 METTL14Q9HCE5 456 aaKnown RBP5.03□□□□□ -1.6
CHD9-221ENST00000615216 UBAP1LF5GYI3 381 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 PFDN6O15212 129 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 PFKFB1P16118 471 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 SLC8A1P32418 973 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 LMNB2Q03252 620 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 BEND3Q5T5X7 828 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 VSIG1Q86XK7 387 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 BLIDQ8IZY5 108 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 GSDMBQ8TAX9 411 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 CHURC1Q8WUH1 139 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 FAN1Q9Y2M0 1017 aa5.03□□□□□ -1.6
CHD9-221ENST00000615216 H0YIN7 160 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 MYL1P05976 194 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms