RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 LTKP29376 864 aa16.26■□□□□ 0.19
VPS36-207ENST00000611132 PLA2G4AP47712 749 aa16.26■□□□□ 0.19
VPS36-207ENST00000611132 USPL1Q5W0Q7 1092 aa16.26■□□□□ 0.19
VPS36-207ENST00000611132 TUBGCP2Q9BSJ2 902 aa16.26■□□□□ 0.19
VPS36-207ENST00000611132 TRIM31Q9BZY9 425 aa16.26■□□□□ 0.19
VPS36-207ENST00000611132 PCDHB6Q9Y5E3 794 aa16.26■□□□□ 0.19
VPS36-207ENST00000611132 PARP3Q9Y6F1 533 aa16.26■□□□□ 0.19
VPS36-207ENST00000611132 KAT6BQ8WYB5 2073 aa16.26■□□□□ 0.19
VPS36-207ENST00000611132 TRIM66O15016 1216 aa16.25■□□□□ 0.19
VPS36-207ENST00000611132 SEMA3EO15041 775 aa16.25■□□□□ 0.19
VPS36-207ENST00000611132 MUM1L1Q5H9M0 696 aa16.25■□□□□ 0.19
VPS36-207ENST00000611132 STOX1Q6ZVD7 989 aa16.25■□□□□ 0.19
VPS36-207ENST00000611132 CCDC25Q86WR0 208 aa16.25■□□□□ 0.19
VPS36-207ENST00000611132 CCDC65Q8IXS2 484 aa16.25■□□□□ 0.19
VPS36-207ENST00000611132 FAM184BQ9ULE4 1060 aa16.25■□□□□ 0.19
VPS36-207ENST00000611132 ACTN4O43707 911 aaKnown RBP16.25■□□□□ 0.19
VPS36-207ENST00000611132 FNBP4Q8N3X1 1017 aaPredicted RBP16.25■□□□□ 0.19
VPS36-207ENST00000611132 KCNK9Q9NPC2 374 aa16.25■□□□□ 0.19
VPS36-207ENST00000611132 PHKG2P15735 406 aa16.25■□□□□ 0.19
VPS36-207ENST00000611132 GUCY2DQ02846 1103 aa16.25■□□□□ 0.19
VPS36-207ENST00000611132 SYCP3Q8IZU3 236 aa16.25■□□□□ 0.19
VPS36-207ENST00000611132 ENGASEQ8NFI3 743 aa16.25■□□□□ 0.19
VPS36-207ENST00000611132 RNF26Q9BY78 433 aaPredicted RBP16.25■□□□□ 0.19
VPS36-207ENST00000611132 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.25■□□□□ 0.19
VPS36-207ENST00000611132 FHOD1Q9Y613 1164 aa16.25■□□□□ 0.19
VPS36-207ENST00000611132 CCNT1O60563 726 aaKnown RBP16.25■□□□□ 0.19
VPS36-207ENST00000611132 ANKRD13CQ8N6S4 541 aa16.25■□□□□ 0.19
VPS36-207ENST00000611132 RETREG2Q8NC44 543 aa16.25■□□□□ 0.19
VPS36-207ENST00000611132 RWDD2AQ9UIY3 292 aa16.25■□□□□ 0.19
VPS36-207ENST00000611132 PCDH11XQ9BZA7 1347 aa16.25■□□□□ 0.19
VPS36-207ENST00000611132 PCDH11YQ9BZA8 1340 aa16.25■□□□□ 0.19
VPS36-207ENST00000611132 CALCOCO2Q13137 446 aa16.24■□□□□ 0.19
VPS36-207ENST00000611132 KRT31Q15323 416 aa16.24■□□□□ 0.19
VPS36-207ENST00000611132 SLF2Q8IX21 1173 aa16.24■□□□□ 0.19
VPS36-207ENST00000611132 EEF2KMTQ96G04 330 aa16.24■□□□□ 0.19
VPS36-207ENST00000611132 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.24■□□□□ 0.19
VPS36-207ENST00000611132 B4DLN1 442 aa16.24■□□□□ 0.19
VPS36-207ENST00000611132 BUB1O43683 1085 aa16.24■□□□□ 0.19
VPS36-207ENST00000611132 TXKP42681 527 aa16.24■□□□□ 0.19
VPS36-207ENST00000611132 C2orf54Q08AI8 447 aa16.24■□□□□ 0.19
VPS36-207ENST00000611132 IFT88Q13099 833 aa16.24■□□□□ 0.19
VPS36-207ENST00000611132 KCNB2Q92953 911 aa16.24■□□□□ 0.19
VPS36-207ENST00000611132 TAF6LQ9Y6J9 622 aa16.24■□□□□ 0.19
VPS36-207ENST00000611132 ADGRB2O60241 1585 aa16.24■□□□□ 0.19
VPS36-207ENST00000611132 GSTO1P78417 241 aa16.24■□□□□ 0.19
VPS36-207ENST00000611132 GKAP1Q5VSY0 366 aaPredicted RBP16.24■□□□□ 0.19
VPS36-207ENST00000611132 SHC4Q6S5L8 630 aa16.24■□□□□ 0.19
VPS36-207ENST00000611132 IL2RBP14784 551 aa16.23■□□□□ 0.19
VPS36-207ENST00000611132 EXOSC10Q01780 885 aaKnown RBP16.23■□□□□ 0.19
VPS36-207ENST00000611132 DYMQ7RTS9 669 aa16.23■□□□□ 0.19
VPS36-207ENST00000611132 CROCCP2Q86T23 111 aa16.23■□□□□ 0.19
VPS36-207ENST00000611132 PAGE5Q96GU1 130 aa16.23■□□□□ 0.19
VPS36-207ENST00000611132 IRX2Q9BZI1 471 aaPredicted RBP16.23■□□□□ 0.19
VPS36-207ENST00000611132 LIFRP42702 1097 aa16.23■□□□□ 0.19
VPS36-207ENST00000611132 NONOQ15233 471 aaKnown RBP eCLIP16.23■□□□□ 0.19
VPS36-207ENST00000611132 DDX12PQ92771 950 aa16.23■□□□□ 0.19
VPS36-207ENST00000611132 LRWD1Q9UFC0 647 aa16.23■□□□□ 0.19
VPS36-207ENST00000611132 VIRMAQ69YN4 1812 aaKnown RBP16.23■□□□□ 0.19
VPS36-207ENST00000611132 CETN3O15182 167 aa16.23■□□□□ 0.19
VPS36-207ENST00000611132 LONP1P36776 959 aaKnown RBP16.23■□□□□ 0.19
VPS36-207ENST00000611132 DCAF17Q5H9S7 520 aaPredicted RBP16.23■□□□□ 0.19
VPS36-207ENST00000611132 ZNF658Q5TYW1 1059 aaPredicted RBP16.23■□□□□ 0.19
VPS36-207ENST00000611132 DAAM2Q86T65 1068 aa16.23■□□□□ 0.19
VPS36-207ENST00000611132 EPSTI1Q96J88 318 aa16.23■□□□□ 0.19
VPS36-207ENST00000611132 PSD3Q9NYI0 1048 aa16.23■□□□□ 0.19
VPS36-207ENST00000611132 FAM169AQ9Y6X4 670 aa16.23■□□□□ 0.19
VPS36-207ENST00000611132 HECW2Q9P2P5 1572 aa16.23■□□□□ 0.19
VPS36-207ENST00000611132 EXOC5O00471 708 aa16.23■□□□□ 0.19
VPS36-207ENST00000611132 MTF1Q14872 753 aa16.23■□□□□ 0.19
VPS36-207ENST00000611132 SETDB1Q15047 1291 aa16.23■□□□□ 0.19
VPS36-207ENST00000611132 GRIPAP1Q4V328 841 aa16.23■□□□□ 0.19
VPS36-207ENST00000611132 CCDC170Q8IYT3 715 aa16.23■□□□□ 0.19
VPS36-207ENST00000611132 CRACR2BQ8N4Y2 399 aaPredicted RBP16.23■□□□□ 0.19
VPS36-207ENST00000611132 CUL5Q93034 780 aa16.23■□□□□ 0.19
VPS36-207ENST00000611132 ZSCAN10Q96SZ4 725 aaPredicted RBP16.23■□□□□ 0.19
VPS36-207ENST00000611132 NIP7Q9Y221 180 aaKnown RBP eCLIP16.23■□□□□ 0.19
VPS36-207ENST00000611132 ADD2P35612 726 aa16.22■□□□□ 0.19
VPS36-207ENST00000611132 VSNL1P62760 191 aa16.22■□□□□ 0.19
VPS36-207ENST00000611132 ALS2CLQ60I27 953 aa16.22■□□□□ 0.19
VPS36-207ENST00000611132 KRT25Q7Z3Z0 450 aa16.22■□□□□ 0.19
VPS36-207ENST00000611132 ORAI2Q96SN7 254 aa16.22■□□□□ 0.19
VPS36-207ENST00000611132 MROH5Q6ZUA9 1318 aa16.22■□□□□ 0.19
VPS36-207ENST00000611132 NRXN1Q9ULB1 1477 aa16.22■□□□□ 0.19
VPS36-207ENST00000611132 TEX33O43247 280 aa16.22■□□□□ 0.19
VPS36-207ENST00000611132 ARID4AP29374 1257 aaPredicted RBP16.22■□□□□ 0.19
VPS36-207ENST00000611132 PEX26Q7Z412 305 aa16.22■□□□□ 0.19
VPS36-207ENST00000611132 BLIDQ8IZY5 108 aa16.22■□□□□ 0.19
VPS36-207ENST00000611132 ABHD10Q9NUJ1 306 aa16.22■□□□□ 0.19
VPS36-207ENST00000611132 MTUS1Q9ULD2 1270 aa16.22■□□□□ 0.19
VPS36-207ENST00000611132 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.22■□□□□ 0.19
VPS36-207ENST00000611132 ALKQ9UM73 1620 aa16.22■□□□□ 0.19
VPS36-207ENST00000611132 TMEM110-MUSTN1A8MSY1 372 aa16.22■□□□□ 0.19
VPS36-207ENST00000611132 RPL13P26373 211 aaKnown RBP16.22■□□□□ 0.19
VPS36-207ENST00000611132 ATP11AP98196 1134 aa16.22■□□□□ 0.19
VPS36-207ENST00000611132 BANK1Q8NDB2 785 aa16.22■□□□□ 0.19
VPS36-207ENST00000611132 CNOT6LQ96LI5 555 aaKnown RBP16.22■□□□□ 0.19
VPS36-207ENST00000611132 COL3A1P02461 1466 aaPredicted RBP16.22■□□□□ 0.19
VPS36-207ENST00000611132 SLC8A1P32418 973 aa16.22■□□□□ 0.19
VPS36-207ENST00000611132 PI16Q6UXB8 463 aa16.22■□□□□ 0.19
VPS36-207ENST00000611132 TRIM7Q9C029 511 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms