RNA–Protein interactions for RNA: ENST00000610348.1

CDH24-206, Transcript of cadherin 24, humanhuman

TSL 1 (best) BASIC

Gene CDH24, Length 2,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH24-206ENST00000610348 RBM17Q96I25 401 aaKnown RBP28.8■■■□□ 2.2
CDH24-206ENST00000610348 ARHGAP6O43182 974 aa28.79■■■□□ 2.2
CDH24-206ENST00000610348 SLF2Q8IX21 1173 aa28.79■■■□□ 2.2
CDH24-206ENST00000610348 TGFBRAP1Q8WUH2 860 aa28.79■■■□□ 2.2
CDH24-206ENST00000610348 DYNLL2Q96FJ2 89 aa28.79■■■□□ 2.2
CDH24-206ENST00000610348 RTFDC1Q9BY42 306 aaPredicted RBP28.79■■■□□ 2.2
CDH24-206ENST00000610348 IL1R1P14778 569 aa28.79■■■□□ 2.2
CDH24-206ENST00000610348 GPSM2P81274 684 aa28.79■■■□□ 2.2
CDH24-206ENST00000610348 DIXDC1Q155Q3 683 aa28.79■■■□□ 2.2
CDH24-206ENST00000610348 CD209Q9NNX6 404 aa28.79■■■□□ 2.2
CDH24-206ENST00000610348 MAD2L2Q9UI95 211 aa28.79■■■□□ 2.2
CDH24-206ENST00000610348 ZSCAN12O43309 604 aa28.78■■■□□ 2.2
CDH24-206ENST00000610348 TXLNAP40222 546 aa28.78■■■□□ 2.2
CDH24-206ENST00000610348 CUL4BQ13620 913 aa28.78■■■□□ 2.2
CDH24-206ENST00000610348 E2F4Q16254 413 aa28.78■■■□□ 2.2
CDH24-206ENST00000610348 TRMT44Q8IYL2 757 aaKnown RBP28.78■■■□□ 2.2
CDH24-206ENST00000610348 GGA1Q9UJY5 639 aa28.78■■■□□ 2.2
CDH24-206ENST00000610348 TNS1Q9HBL0 1735 aaKnown RBP28.78■■■□□ 2.2
CDH24-206ENST00000610348 SYNRGQ9UMZ2 1314 aa28.78■■■□□ 2.2
CDH24-206ENST00000610348 MCM7P33993 719 aa28.77■■■□□ 2.2
CDH24-206ENST00000610348 CTAGE1Q96RT6 745 aa28.77■■■□□ 2.2
CDH24-206ENST00000610348 GPR75-ASB3A0A0A6YYF3 556 aa28.77■■■□□ 2.2
CDH24-206ENST00000610348 A0A1B0GTH6 734 aa28.77■■■□□ 2.2
CDH24-206ENST00000610348 UFL1O94874 794 aa28.77■■■□□ 2.2
CDH24-206ENST00000610348 UBE2Q2Q8WVN8 375 aa28.77■■■□□ 2.2
CDH24-206ENST00000610348 ERO1AQ96HE7 468 aa28.77■■■□□ 2.2
CDH24-206ENST00000610348 MED15Q96RN5 788 aa28.77■■■□□ 2.2
CDH24-206ENST00000610348 UBR3Q6ZT12 1888 aa28.76■■■□□ 2.2
CDH24-206ENST00000610348 BBOX1O75936 387 aa28.76■■■□□ 2.19
CDH24-206ENST00000610348 NR1I3Q14994 352 aa28.76■■■□□ 2.19
CDH24-206ENST00000610348 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.76■■■□□ 2.19
CDH24-206ENST00000610348 GTPBP6O43824 516 aaPredicted RBP28.76■■■□□ 2.19
CDH24-206ENST00000610348 STX10O60499 249 aa28.76■■■□□ 2.19
CDH24-206ENST00000610348 TBC1D22AQ8WUA7 517 aa28.76■■■□□ 2.19
CDH24-206ENST00000610348 FAM163AQ96GL9 167 aaPredicted RBP28.76■■■□□ 2.19
CDH24-206ENST00000610348 SAMSN1Q9NSI8 373 aaKnown RBP28.76■■■□□ 2.19
CDH24-206ENST00000610348 CDK5RAP2Q96SN8 1893 aa28.75■■■□□ 2.19
CDH24-206ENST00000610348 CCDC194A0A1B0GVG4 234 aa28.75■■■□□ 2.19
CDH24-206ENST00000610348 GOLGA6L9A6NEM1 432 aa28.75■■■□□ 2.19
CDH24-206ENST00000610348 M0R2N6 131 aa28.75■■■□□ 2.19
CDH24-206ENST00000610348 RASA1P20936 1047 aa28.75■■■□□ 2.19
CDH24-206ENST00000610348 BTDP43251 543 aa28.75■■■□□ 2.19
CDH24-206ENST00000610348 SLC4A8Q2Y0W8 1093 aa28.75■■■□□ 2.19
CDH24-206ENST00000610348 PDXDC2PQ6P474 469 aa28.75■■■□□ 2.19
CDH24-206ENST00000610348 STAG2Q8N3U4 1231 aa28.75■■■□□ 2.19
CDH24-206ENST00000610348 RMND1Q9NWS8 449 aa28.75■■■□□ 2.19
CDH24-206ENST00000610348 PODXL2Q9NZ53 605 aa28.75■■■□□ 2.19
CDH24-206ENST00000610348 CGNQ9P2M7 1197 aaKnown RBP28.75■■■□□ 2.19
CDH24-206ENST00000610348 BAZ2BQ9UIF8 2168 aaKnown RBP28.75■■■□□ 2.19
CDH24-206ENST00000610348 USP17L3A6NCW0 530 aa28.74■■■□□ 2.19
CDH24-206ENST00000610348 USP17L4A6NCW7 530 aa28.74■■■□□ 2.19
CDH24-206ENST00000610348 PALM3A6NDB9 673 aaPredicted RBP28.74■■■□□ 2.19
CDH24-206ENST00000610348 GRIK5Q16478 980 aa28.74■■■□□ 2.19
CDH24-206ENST00000610348 C16orf86Q6ZW13 317 aa28.74■■■□□ 2.19
CDH24-206ENST00000610348 USP17L1Q7RTZ2 530 aa28.74■■■□□ 2.19
CDH24-206ENST00000610348 C4orf32Q8N8J7 132 aa28.74■■■□□ 2.19
CDH24-206ENST00000610348 BAG1Q99933 345 aaPredicted RBP28.74■■■□□ 2.19
CDH24-206ENST00000610348 L2HGDHQ9H9P8 463 aa28.74■■■□□ 2.19
CDH24-206ENST00000610348 DDX60LQ5H9U9 1706 aaKnown RBP28.74■■■□□ 2.19
CDH24-206ENST00000610348 PHLPP2Q6ZVD8 1323 aa28.74■■■□□ 2.19
CDH24-206ENST00000610348 SLU7O95391 586 aaKnown RBP28.74■■■□□ 2.19
CDH24-206ENST00000610348 VEGFAP15692 232 aaPredicted RBP28.74■■■□□ 2.19
CDH24-206ENST00000610348 CDKAL1Q5VV42 579 aa28.74■■■□□ 2.19
CDH24-206ENST00000610348 TMEM139Q8IV31 216 aa28.74■■■□□ 2.19
CDH24-206ENST00000610348 MAPKAPK5Q8IW41 473 aa28.74■■■□□ 2.19
CDH24-206ENST00000610348 TMEM47Q9BQJ4 181 aa28.74■■■□□ 2.19
CDH24-206ENST00000610348 BARHL2Q9NY43 387 aa28.74■■■□□ 2.19
CDH24-206ENST00000610348 PPP1R3GB7ZBB8 358 aa28.73■■■□□ 2.19
CDH24-206ENST00000610348 LAD1O00515 517 aa28.73■■■□□ 2.19
CDH24-206ENST00000610348 ETF1P62495 437 aaKnown RBP28.73■■■□□ 2.19
CDH24-206ENST00000610348 HOMER1Q86YM7 354 aa28.73■■■□□ 2.19
CDH24-206ENST00000610348 PROM2Q8N271 834 aa28.73■■■□□ 2.19
CDH24-206ENST00000610348 GPKOWQ92917 476 aaPredicted RBP eCLIP28.73■■■□□ 2.19
CDH24-206ENST00000610348 SPZ1Q9BXG8 430 aa28.73■■■□□ 2.19
CDH24-206ENST00000610348 SERPINB2P05120 415 aa28.72■■■□□ 2.19
CDH24-206ENST00000610348 GYS1P13807 737 aa28.72■■■□□ 2.19
CDH24-206ENST00000610348 HSP90AA4PQ58FG1 418 aa28.72■■■□□ 2.19
CDH24-206ENST00000610348 TEX11Q8IYF3 940 aa28.72■■■□□ 2.19
CDH24-206ENST00000610348 CCDC12Q8WUD4 166 aaPredicted RBP28.72■■■□□ 2.19
CDH24-206ENST00000610348 CD44P16070 742 aaKnown RBP28.72■■■□□ 2.19
CDH24-206ENST00000610348 IL17AQ16552 155 aa28.72■■■□□ 2.19
CDH24-206ENST00000610348 FILIP1LQ4L180 1135 aa28.72■■■□□ 2.19
CDH24-206ENST00000610348 SYT10Q6XYQ8 523 aa28.72■■■□□ 2.19
CDH24-206ENST00000610348 TMC4Q7Z404 712 aa28.72■■■□□ 2.19
CDH24-206ENST00000610348 NEDD1Q8NHV4 660 aa28.72■■■□□ 2.19
CDH24-206ENST00000610348 STX8Q9UNK0 236 aa28.72■■■□□ 2.19
CDH24-206ENST00000610348 FAM205AQ6ZU69 1335 aa28.71■■■□□ 2.19
CDH24-206ENST00000610348 SMARCA1P28370 1054 aa28.71■■■□□ 2.19
CDH24-206ENST00000610348 HOXA10P31260 410 aaPredicted RBP28.71■■■□□ 2.19
CDH24-206ENST00000610348 SEMA3FQ13275 785 aa28.71■■■□□ 2.19
CDH24-206ENST00000610348 WWC2Q6AWC2 1192 aa28.71■■■□□ 2.19
CDH24-206ENST00000610348 TC2NQ8N9U0 490 aa28.71■■■□□ 2.19
CDH24-206ENST00000610348 STXBP3O00186 592 aa28.7■■■□□ 2.19
CDH24-206ENST00000610348 CDK8P49336 464 aa28.7■■■□□ 2.19
CDH24-206ENST00000610348 SLC27A3Q5K4L6 730 aa28.7■■■□□ 2.19
CDH24-206ENST00000610348 PPP4R3BQ5MIZ7 849 aa28.7■■■□□ 2.19
CDH24-206ENST00000610348 KLHL10Q6JEL2 608 aa28.7■■■□□ 2.19
CDH24-206ENST00000610348 EYA3Q99504 573 aa28.7■■■□□ 2.19
CDH24-206ENST00000610348 SAP30BPQ9UHR5 308 aaKnown RBP28.7■■■□□ 2.19
CDH24-206ENST00000610348 ZNF215Q9UL58 517 aaPredicted RBP28.7■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms