RNA–Protein interactions for RNA: ENST00000607632.1

PRDM16-210, Transcript of PR/SET domain 16, humanhuman

TSL 2

Gene PRDM16, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-210ENST00000607632 REPS2Q8NFH8 660 aa16.99■□□□□ 0.31
PRDM16-210ENST00000607632 ATG4CQ96DT6 458 aa16.99■□□□□ 0.31
PRDM16-210ENST00000607632 TCP11L1Q9NUJ3 509 aa16.99■□□□□ 0.31
PRDM16-210ENST00000607632 PPP1R9AQ9ULJ8 1098 aa16.99■□□□□ 0.31
PRDM16-210ENST00000607632 CHMLP26374 656 aa16.98■□□□□ 0.31
PRDM16-210ENST00000607632 FAM83BQ5T0W9 1011 aa16.98■□□□□ 0.31
PRDM16-210ENST00000607632 AKNAD1Q5T1N1 836 aa16.98■□□□□ 0.31
PRDM16-210ENST00000607632 PLEKHH3Q7Z736 793 aa16.98■□□□□ 0.31
PRDM16-210ENST00000607632 NUDT12Q9BQG2 462 aa16.98■□□□□ 0.31
PRDM16-210ENST00000607632 MOV10L1Q9BXT6 1211 aaKnown RBP16.98■□□□□ 0.31
PRDM16-210ENST00000607632 SPATC1LQ9H0A9 340 aa16.98■□□□□ 0.31
PRDM16-210ENST00000607632 FBXO28Q9NVF7 368 aa16.98■□□□□ 0.31
PRDM16-210ENST00000607632 TSPY2A6NKD2 308 aa16.97■□□□□ 0.31
PRDM16-210ENST00000607632 MTFR1Q15390 333 aa16.97■□□□□ 0.31
PRDM16-210ENST00000607632 TBC1D10CQ8IV04 446 aa16.97■□□□□ 0.31
PRDM16-210ENST00000607632 SLC15A5A6NIM6 579 aa16.96■□□□□ 0.31
PRDM16-210ENST00000607632 VWA5AO00534 786 aa16.96■□□□□ 0.31
PRDM16-210ENST00000607632 IGHA2P01877 340 aa16.96■□□□□ 0.31
PRDM16-210ENST00000607632 HOXC6P09630 235 aa16.96■□□□□ 0.31
PRDM16-210ENST00000607632 ELNP15502 786 aa16.96■□□□□ 0.31
PRDM16-210ENST00000607632 PTPREP23469 700 aa16.96■□□□□ 0.31
PRDM16-210ENST00000607632 HAND2P61296 217 aa16.96■□□□□ 0.31
PRDM16-210ENST00000607632 UBXN2AP68543 259 aa16.96■□□□□ 0.31
PRDM16-210ENST00000607632 GRB14Q14449 540 aa16.96■□□□□ 0.31
PRDM16-210ENST00000607632 TMEM132BQ14DG7 1078 aa16.96■□□□□ 0.31
PRDM16-210ENST00000607632 LRRC47Q8N1G4 583 aaKnown RBP16.96■□□□□ 0.31
PRDM16-210ENST00000607632 NKX2-3Q8TAU0 364 aa16.96■□□□□ 0.31
PRDM16-210ENST00000607632 GMCL1Q96IK5 515 aa16.96■□□□□ 0.31
PRDM16-210ENST00000607632 TMEM106CQ9BVX2 250 aa16.96■□□□□ 0.31
PRDM16-210ENST00000607632 RNF41Q9H4P4 317 aaPredicted RBP16.96■□□□□ 0.31
PRDM16-210ENST00000607632 ZNF214Q9UL59 606 aaPredicted RBP16.96■□□□□ 0.31
PRDM16-210ENST00000607632 ZNF213O14771 459 aa16.95■□□□□ 0.3
PRDM16-210ENST00000607632 SGSM2O43147 1006 aa16.95■□□□□ 0.3
PRDM16-210ENST00000607632 RANBP6O60518 1105 aaKnown RBP16.95■□□□□ 0.3
PRDM16-210ENST00000607632 PLA2G6O60733 806 aa16.95■□□□□ 0.3
PRDM16-210ENST00000607632 HMGCRP04035 888 aa16.95■□□□□ 0.3
PRDM16-210ENST00000607632 INHAP05111 366 aa16.95■□□□□ 0.3
PRDM16-210ENST00000607632 GJB1P08034 283 aa16.95■□□□□ 0.3
PRDM16-210ENST00000607632 MAP2K5Q13163 448 aa16.95■□□□□ 0.3
PRDM16-210ENST00000607632 MAP3K21Q5TCX8 1036 aa16.95■□□□□ 0.3
PRDM16-210ENST00000607632 TRMT44Q8IYL2 757 aaKnown RBP16.95■□□□□ 0.3
PRDM16-210ENST00000607632 RUFY2Q8WXA3 655 aa16.95■□□□□ 0.3
PRDM16-210ENST00000607632 TRIB2Q92519 343 aa16.95■□□□□ 0.3
PRDM16-210ENST00000607632 NUP88Q99567 741 aaPredicted RBP16.95■□□□□ 0.3
PRDM16-210ENST00000607632 SLF1Q9BQI6 1058 aa16.95■□□□□ 0.3
PRDM16-210ENST00000607632 ATP2A1O14983 1001 aa16.94■□□□□ 0.3
PRDM16-210ENST00000607632 STRNO43815 780 aa16.94■□□□□ 0.3
PRDM16-210ENST00000607632 NMT2O60551 498 aa16.94■□□□□ 0.3
PRDM16-210ENST00000607632 CCL5P13501 91 aa16.94■□□□□ 0.3
PRDM16-210ENST00000607632 CAPN2P17655 700 aa16.94■□□□□ 0.3
PRDM16-210ENST00000607632 EN2P19622 333 aaPredicted RBP16.94■□□□□ 0.3
PRDM16-210ENST00000607632 RGS2P41220 211 aa16.94■□□□□ 0.3
PRDM16-210ENST00000607632 SLFN13Q68D06 897 aa16.94■□□□□ 0.3
PRDM16-210ENST00000607632 RCSD1Q6JBY9 416 aa16.94■□□□□ 0.3
PRDM16-210ENST00000607632 MFSD6Q6ZSS7 791 aa16.94■□□□□ 0.3
PRDM16-210ENST00000607632 RIOX2Q8IUF8 465 aa16.94■□□□□ 0.3
PRDM16-210ENST00000607632 ABRAQ8N0Z2 381 aa16.94■□□□□ 0.3
PRDM16-210ENST00000607632 PRPF38AQ8NAV1 312 aaKnown RBP16.94■□□□□ 0.3
PRDM16-210ENST00000607632 APBA2Q99767 749 aa16.94■□□□□ 0.3
PRDM16-210ENST00000607632 MROH8Q9H579 483 aa16.94■□□□□ 0.3
PRDM16-210ENST00000607632 PAK6Q9NQU5 681 aaPredicted RBP16.94■□□□□ 0.3
PRDM16-210ENST00000607632 CTNNA3Q9UI47 895 aa16.94■□□□□ 0.3
PRDM16-210ENST00000607632 FEM1BQ9UK73 627 aa16.94■□□□□ 0.3
PRDM16-210ENST00000607632 NEDD4P46934 1319 aa16.94■□□□□ 0.3
PRDM16-210ENST00000607632 SLC25A27O95847 323 aa16.93■□□□□ 0.3
PRDM16-210ENST00000607632 BMP3P12645 472 aa16.93■□□□□ 0.3
PRDM16-210ENST00000607632 ERCC3P19447 782 aa16.93■□□□□ 0.3
PRDM16-210ENST00000607632 CYP2B6P20813 491 aa16.93■□□□□ 0.3
PRDM16-210ENST00000607632 GJA8P48165 433 aa16.93■□□□□ 0.3
PRDM16-210ENST00000607632 BMP2KLQ5H9B9 411 aa16.93■□□□□ 0.3
PRDM16-210ENST00000607632 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.93■□□□□ 0.3
PRDM16-210ENST00000607632 CCAR1Q8IX12 1150 aaKnown RBP16.93■□□□□ 0.3
PRDM16-210ENST00000607632 SHISA4Q96DD7 197 aa16.93■□□□□ 0.3
PRDM16-210ENST00000607632 TTC14Q96N46 770 aa16.93■□□□□ 0.3
PRDM16-210ENST00000607632 UNC93B1Q9H1C4 597 aa16.93■□□□□ 0.3
PRDM16-210ENST00000607632 STX8Q9UNK0 236 aa16.93■□□□□ 0.3
PRDM16-210ENST00000607632 FDX1P10109 184 aa16.92■□□□□ 0.3
PRDM16-210ENST00000607632 COPB2P35606 906 aa16.92■□□□□ 0.3
PRDM16-210ENST00000607632 IMMTQ16891 758 aaKnown RBP16.92■□□□□ 0.3
PRDM16-210ENST00000607632 ESR2Q92731 530 aa16.92■□□□□ 0.3
PRDM16-210ENST00000607632 SLC38A10Q9HBR0 1119 aa16.92■□□□□ 0.3
PRDM16-210ENST00000607632 ZNFX1Q9P2E3 1918 aaKnown RBP16.92■□□□□ 0.3
PRDM16-210ENST00000607632 MKI67P46013 3256 aaKnown RBP16.91■□□□□ 0.3
PRDM16-210ENST00000607632 RAD21O60216 631 aa16.91■□□□□ 0.3
PRDM16-210ENST00000607632 TOP1P11387 765 aaKnown RBP16.91■□□□□ 0.3
PRDM16-210ENST00000607632 STAT3P40763 770 aa16.91■□□□□ 0.3
PRDM16-210ENST00000607632 RRP12Q5JTH9 1297 aaKnown RBP16.91■□□□□ 0.3
PRDM16-210ENST00000607632 UBE2Q1Q7Z7E8 422 aa16.91■□□□□ 0.3
PRDM16-210ENST00000607632 FAM160B2Q86V87 743 aa16.91■□□□□ 0.3
PRDM16-210ENST00000607632 ANKS1AQ92625 1134 aa16.91■□□□□ 0.3
PRDM16-210ENST00000607632 TMEM47Q9BQJ4 181 aa16.91■□□□□ 0.3
PRDM16-210ENST00000607632 RNF208Q9H0X6 261 aa16.91■□□□□ 0.3
PRDM16-210ENST00000607632 BIN2Q9UBW5 565 aaPredicted RBP16.91■□□□□ 0.3
PRDM16-210ENST00000607632 IVNS1ABPQ9Y6Y0 642 aa16.91■□□□□ 0.3
PRDM16-210ENST00000607632 RPTORQ8N122 1335 aa16.91■□□□□ 0.3
PRDM16-210ENST00000607632 SNHG28P0DPA3 235 aa16.9■□□□□ 0.3
PRDM16-210ENST00000607632 ZKSCAN1P17029 563 aaPredicted RBP16.9■□□□□ 0.3
PRDM16-210ENST00000607632 SLC1A4P43007 532 aa16.9■□□□□ 0.3
PRDM16-210ENST00000607632 OAZ1P54368 228 aa16.9■□□□□ 0.3
PRDM16-210ENST00000607632 PTH1RQ03431 593 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms