RNA–Protein interactions for RNA: ENST00000605166.1

HMGB1P51-201, Transcript of high mobility group box 1 pseudogene 51, humanhuman

BASIC

Gene HMGB1P51, Length 638 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P51-201ENST00000605166 CAPNS1P04632 268 aa7.57□□□□□ -1.2
HMGB1P51-201ENST00000605166 PABPC1P11940 636 aaKnown RBP7.57□□□□□ -1.2
HMGB1P51-201ENST00000605166 SOX4Q06945 474 aaPredicted RBP7.57□□□□□ -1.2
HMGB1P51-201ENST00000605166 DOC2BQ14184 412 aa7.57□□□□□ -1.2
HMGB1P51-201ENST00000605166 MAP7Q14244 749 aa7.57□□□□□ -1.2
HMGB1P51-201ENST00000605166 TRIM61Q5EBN2 209 aa7.57□□□□□ -1.2
HMGB1P51-201ENST00000605166 DCAF15Q66K64 600 aa7.57□□□□□ -1.2
HMGB1P51-201ENST00000605166 NSMFQ6X4W1 530 aa7.57□□□□□ -1.2
HMGB1P51-201ENST00000605166 UBE3DQ7Z6J8 389 aa7.57□□□□□ -1.2
HMGB1P51-201ENST00000605166 ADAT2Q7Z6V5 191 aaKnown RBP7.57□□□□□ -1.2
HMGB1P51-201ENST00000605166 LRRTM3Q86VH5 581 aa7.57□□□□□ -1.2
HMGB1P51-201ENST00000605166 FBXO11Q86XK2 927 aa7.57□□□□□ -1.2
HMGB1P51-201ENST00000605166 BVESQ8NE79 360 aa7.57□□□□□ -1.2
HMGB1P51-201ENST00000605166 ISL2Q96A47 359 aa7.57□□□□□ -1.2
HMGB1P51-201ENST00000605166 FGD4Q96M96 766 aa7.57□□□□□ -1.2
HMGB1P51-201ENST00000605166 FOXQ1Q9C009 403 aa7.57□□□□□ -1.2
HMGB1P51-201ENST00000605166 PIDD1Q9HB75 910 aa7.57□□□□□ -1.2
HMGB1P51-201ENST00000605166 WHRNQ9P202 907 aa7.57□□□□□ -1.2
HMGB1P51-201ENST00000605166 USP21Q9UK80 565 aa7.57□□□□□ -1.2
HMGB1P51-201ENST00000605166 PPM1BO75688 479 aa7.56□□□□□ -1.2
HMGB1P51-201ENST00000605166 WISP1O95388 367 aa7.56□□□□□ -1.2
HMGB1P51-201ENST00000605166 EVA1CP58658 441 aa7.56□□□□□ -1.2
HMGB1P51-201ENST00000605166 BRDTQ58F21 947 aaPredicted RBP7.56□□□□□ -1.2
HMGB1P51-201ENST00000605166 KIAA1211Q6ZU35 1233 aa7.56□□□□□ -1.2
HMGB1P51-201ENST00000605166 MFSD2AQ8NA29 543 aa7.56□□□□□ -1.2
HMGB1P51-201ENST00000605166 TARS2Q9BW92 718 aaKnown RBP7.56□□□□□ -1.2
HMGB1P51-201ENST00000605166 MKRN2Q9H000 416 aaKnown RBP7.56□□□□□ -1.2
HMGB1P51-201ENST00000605166 SFMBT1Q9UHJ3 866 aa7.56□□□□□ -1.2
HMGB1P51-201ENST00000605166 FAN1Q9Y2M0 1017 aa7.56□□□□□ -1.2
HMGB1P51-201ENST00000605166 SUGT1Q9Y2Z0 365 aa7.56□□□□□ -1.2
HMGB1P51-201ENST00000605166 NOP56O00567 594 aaKnown RBP7.55□□□□□ -1.2
HMGB1P51-201ENST00000605166 PRODHO43272 600 aa7.55□□□□□ -1.2
HMGB1P51-201ENST00000605166 RNGTTO60942 597 aaKnown RBP7.55□□□□□ -1.2
HMGB1P51-201ENST00000605166 LRIG2O94898 1065 aa7.55□□□□□ -1.2
HMGB1P51-201ENST00000605166 CD247P20963 164 aa7.55□□□□□ -1.2
HMGB1P51-201ENST00000605166 RNF4P78317 190 aa7.55□□□□□ -1.2
HMGB1P51-201ENST00000605166 NBPF12Q5TAG4 269 aaPredicted RBP7.55□□□□□ -1.2
HMGB1P51-201ENST00000605166 WWC2Q6AWC2 1192 aa7.55□□□□□ -1.2
HMGB1P51-201ENST00000605166 IGF2-ASQ6U949 168 aa7.55□□□□□ -1.2
HMGB1P51-201ENST00000605166 ACAD11Q709F0 780 aa7.55□□□□□ -1.2
HMGB1P51-201ENST00000605166 DYMQ7RTS9 669 aa7.55□□□□□ -1.2
HMGB1P51-201ENST00000605166 C7orf61Q8IZ16 206 aa7.55□□□□□ -1.2
HMGB1P51-201ENST00000605166 AFAP1L2Q8N4X5 818 aa7.55□□□□□ -1.2
HMGB1P51-201ENST00000605166 CRACR2BQ8N4Y2 399 aaPredicted RBP7.55□□□□□ -1.2
HMGB1P51-201ENST00000605166 UBR7Q8N806 425 aa7.55□□□□□ -1.2
HMGB1P51-201ENST00000605166 PPP1R13LQ8WUF5 828 aa7.55□□□□□ -1.2
HMGB1P51-201ENST00000605166 OSBP2Q969R2 916 aa7.55□□□□□ -1.2
HMGB1P51-201ENST00000605166 RCC1LQ96I51 464 aaKnown RBP7.55□□□□□ -1.2
HMGB1P51-201ENST00000605166 ZNF512BQ96KM6 892 aaPredicted RBP7.55□□□□□ -1.2
HMGB1P51-201ENST00000605166 MRGPRX3Q96LB0 322 aa7.55□□□□□ -1.2
HMGB1P51-201ENST00000605166 ZNF451Q9Y4E5 1061 aa7.55□□□□□ -1.2
HMGB1P51-201ENST00000605166 TIAF1O95411 115 aa7.54□□□□□ -1.2
HMGB1P51-201ENST00000605166 ITGA4P13612 1032 aa7.54□□□□□ -1.2
HMGB1P51-201ENST00000605166 SDSP20132 328 aa7.54□□□□□ -1.2
HMGB1P51-201ENST00000605166 GRIA2P42262 883 aa7.54□□□□□ -1.2
HMGB1P51-201ENST00000605166 ADGRE1Q14246 886 aa7.54□□□□□ -1.2
HMGB1P51-201ENST00000605166 CNNM4Q6P4Q7 775 aa7.54□□□□□ -1.2
HMGB1P51-201ENST00000605166 POMZP3Q6PJE2 187 aa7.54□□□□□ -1.2
HMGB1P51-201ENST00000605166 TXNRD3Q86VQ6 643 aa7.54□□□□□ -1.2
HMGB1P51-201ENST00000605166 TRIM59Q8IWR1 403 aa7.54□□□□□ -1.2
HMGB1P51-201ENST00000605166 PPM1KQ8N3J5 372 aa7.54□□□□□ -1.2
HMGB1P51-201ENST00000605166 POLR3GLQ9BT43 218 aa7.54□□□□□ -1.2
HMGB1P51-201ENST00000605166 SSU72Q9NP77 194 aaKnown RBP7.54□□□□□ -1.2
HMGB1P51-201ENST00000605166 CEP131Q9UPN4 1083 aa7.54□□□□□ -1.2
HMGB1P51-201ENST00000605166 EMC9Q9Y3B6 208 aa7.54□□□□□ -1.2
HMGB1P51-201ENST00000605166 A0A087WZG4 1122 aa7.53□□□□□ -1.2
HMGB1P51-201ENST00000605166 SHOXO15266 292 aa7.53□□□□□ -1.2
HMGB1P51-201ENST00000605166 TBX1O43435 398 aa7.53□□□□□ -1.2
HMGB1P51-201ENST00000605166 CPEP16870 476 aa7.53□□□□□ -1.2
HMGB1P51-201ENST00000605166 ASPAP45381 313 aa7.53□□□□□ -1.2
HMGB1P51-201ENST00000605166 AUHQ13825 339 aaKnown RBP7.53□□□□□ -1.2
HMGB1P51-201ENST00000605166 ARMCX6Q7L4S7 300 aa7.53□□□□□ -1.2
HMGB1P51-201ENST00000605166 FMNL3Q8IVF7 1028 aa7.53□□□□□ -1.2
HMGB1P51-201ENST00000605166 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.53□□□□□ -1.2
HMGB1P51-201ENST00000605166 SMYD4Q8IYR2 804 aaPredicted RBP7.53□□□□□ -1.2
HMGB1P51-201ENST00000605166 AHI1Q8N157 1196 aa7.53□□□□□ -1.2
HMGB1P51-201ENST00000605166 ARHGEF39Q8N4T4 335 aa7.53□□□□□ -1.2
HMGB1P51-201ENST00000605166 XAGE3Q8WTP9 111 aa7.53□□□□□ -1.2
HMGB1P51-201ENST00000605166 DDX1Q92499 740 aaKnown RBP7.53□□□□□ -1.2
HMGB1P51-201ENST00000605166 VWCEQ96DN2 955 aa7.53□□□□□ -1.2
HMGB1P51-201ENST00000605166 KREMEN1Q96MU8 473 aa7.53□□□□□ -1.2
HMGB1P51-201ENST00000605166 LGR4Q9BXB1 951 aa7.53□□□□□ -1.2
HMGB1P51-201ENST00000605166 SEMA6BQ9H3T3 888 aa7.53□□□□□ -1.2
HMGB1P51-201ENST00000605166 TRIM39Q9HCM9 518 aa7.53□□□□□ -1.2
HMGB1P51-201ENST00000605166 GP6Q9HCN6 339 aa7.53□□□□□ -1.2
HMGB1P51-201ENST00000605166 PCOLCE2Q9UKZ9 415 aa7.53□□□□□ -1.2
HMGB1P51-201ENST00000605166 AKT3Q9Y243 479 aa7.53□□□□□ -1.2
HMGB1P51-201ENST00000605166 ACTL7BQ9Y614 415 aa7.53□□□□□ -1.2
HMGB1P51-201ENST00000605166 COL17A1Q9UMD9 1497 aaPredicted RBP7.52□□□□□ -1.21
HMGB1P51-201ENST00000605166 EFCAB14O75071 495 aa7.52□□□□□ -1.21
HMGB1P51-201ENST00000605166 DNAJC8O75937 253 aaPredicted RBP7.52□□□□□ -1.21
HMGB1P51-201ENST00000605166 C6orf222P0C671 652 aaPredicted RBP7.52□□□□□ -1.21
HMGB1P51-201ENST00000605166 DRD2P14416 443 aa7.52□□□□□ -1.21
HMGB1P51-201ENST00000605166 POU3F2P20265 443 aaPredicted RBP7.52□□□□□ -1.21
HMGB1P51-201ENST00000605166 GABREP78334 506 aa7.52□□□□□ -1.21
HMGB1P51-201ENST00000605166 MBTPS1Q14703 1052 aa7.52□□□□□ -1.21
HMGB1P51-201ENST00000605166 DDX46Q7L014 1031 aaKnown RBP7.52□□□□□ -1.21
HMGB1P51-201ENST00000605166 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.52□□□□□ -1.21
HMGB1P51-201ENST00000605166 C12orf50Q8NA57 414 aaPredicted RBP7.52□□□□□ -1.21
HMGB1P51-201ENST00000605166 ATL2Q8NHH9 583 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms