RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 OR6P1Q8NGX9 317 aa5.72□□□□□ -1.49
CKS1BP3-201ENST00000600888 ASB11Q8WXH4 323 aa5.72□□□□□ -1.49
CKS1BP3-201ENST00000600888 DHRS1Q96LJ7 313 aa5.72□□□□□ -1.49
CKS1BP3-201ENST00000600888 SLC6A18Q96N87 628 aa5.72□□□□□ -1.49
CKS1BP3-201ENST00000600888 SEMA3GQ9NS98 782 aa5.72□□□□□ -1.49
CKS1BP3-201ENST00000600888 PITPNM2Q9BZ72 1349 aa5.72□□□□□ -1.49
CKS1BP3-201ENST00000600888 KIAA0586Q9BVV6 1533 aa5.71□□□□□ -1.5
CKS1BP3-201ENST00000600888 FAM86C2PA6NEL3 165 aa5.71□□□□□ -1.5
CKS1BP3-201ENST00000600888 H3BS24 57 aa5.71□□□□□ -1.5
CKS1BP3-201ENST00000600888 CD8BP10966 210 aa5.71□□□□□ -1.5
CKS1BP3-201ENST00000600888 DNAJA1P31689 397 aaKnown RBP5.71□□□□□ -1.5
CKS1BP3-201ENST00000600888 CD96P40200 585 aa5.71□□□□□ -1.5
CKS1BP3-201ENST00000600888 RNF4P78317 190 aa5.71□□□□□ -1.5
CKS1BP3-201ENST00000600888 ZYXQ15942 572 aaKnown RBP5.71□□□□□ -1.5
CKS1BP3-201ENST00000600888 NBPF11Q86T75 865 aa5.71□□□□□ -1.5
CKS1BP3-201ENST00000600888 WFDC3Q8IUB2 231 aa5.71□□□□□ -1.5
CKS1BP3-201ENST00000600888 FLCNQ8NFG4 579 aa5.71□□□□□ -1.5
CKS1BP3-201ENST00000600888 UBE2FQ969M7 185 aa5.71□□□□□ -1.5
CKS1BP3-201ENST00000600888 GMLQ99445 158 aa5.71□□□□□ -1.5
CKS1BP3-201ENST00000600888 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.71□□□□□ -1.5
CKS1BP3-201ENST00000600888 DUSP15Q9H1R2 295 aaPredicted RBP5.71□□□□□ -1.5
CKS1BP3-201ENST00000600888 PAK6Q9NQU5 681 aaPredicted RBP5.71□□□□□ -1.5
CKS1BP3-201ENST00000600888 SSBP05455 408 aaKnown RBP eCLIP5.7□□□□□ -1.5
CKS1BP3-201ENST00000600888 SRFP11831 508 aa5.7□□□□□ -1.5
CKS1BP3-201ENST00000600888 GP2P55259 537 aaKnown RBP5.7□□□□□ -1.5
CKS1BP3-201ENST00000600888 NBPF9Q3BBW0 867 aa5.7□□□□□ -1.5
CKS1BP3-201ENST00000600888 NAALADL2Q58DX5 795 aa5.7□□□□□ -1.5
CKS1BP3-201ENST00000600888 ZNF574Q6ZN55 896 aaPredicted RBP5.7□□□□□ -1.5
CKS1BP3-201ENST00000600888 THAP5Q7Z6K1 395 aa5.7□□□□□ -1.5
CKS1BP3-201ENST00000600888 TTC6Q86TZ1 520 aa5.7□□□□□ -1.5
CKS1BP3-201ENST00000600888 TP53INP2Q8IXH6 220 aa5.7□□□□□ -1.5
CKS1BP3-201ENST00000600888 FAM169BQ8N8A8 192 aa5.7□□□□□ -1.5
CKS1BP3-201ENST00000600888 ANAPC16Q96DE5 110 aa5.7□□□□□ -1.5
CKS1BP3-201ENST00000600888 ZNF512BQ96KM6 892 aaPredicted RBP5.7□□□□□ -1.5
CKS1BP3-201ENST00000600888 ZSWIM5Q9P217 1185 aa5.7□□□□□ -1.5
CKS1BP3-201ENST00000600888 SUCOQ9UBS9 1254 aaKnown RBP5.7□□□□□ -1.5
CKS1BP3-201ENST00000600888 CARMIL1Q5VZK9 1371 aa5.69□□□□□ -1.5
CKS1BP3-201ENST00000600888 PRG4Q92954 1404 aaPredicted RBP5.69□□□□□ -1.5
CKS1BP3-201ENST00000600888 A0A1W2PQH9 124 aa5.69□□□□□ -1.5
CKS1BP3-201ENST00000600888 FGRP09769 529 aa5.69□□□□□ -1.5
CKS1BP3-201ENST00000600888 MCF2L2Q86YR7 1114 aa5.69□□□□□ -1.5
CKS1BP3-201ENST00000600888 C19orf47Q8N9M1 422 aaKnown RBP5.69□□□□□ -1.5
CKS1BP3-201ENST00000600888 GPR62Q9BZJ7 368 aa5.69□□□□□ -1.5
CKS1BP3-201ENST00000600888 TRIT1Q9H3H1 467 aaKnown RBP5.69□□□□□ -1.5
CKS1BP3-201ENST00000600888 ATP13A1Q9HD20 1204 aa5.69□□□□□ -1.5
CKS1BP3-201ENST00000600888 MRVI1Q9Y6F6 885 aa5.69□□□□□ -1.5
CKS1BP3-201ENST00000600888 LTBP3Q9NS15 1303 aa5.69□□□□□ -1.5
CKS1BP3-201ENST00000600888 WASH4PA8MWX3 477 aa5.68□□□□□ -1.5
CKS1BP3-201ENST00000600888 ETFBP38117 255 aa5.68□□□□□ -1.5
CKS1BP3-201ENST00000600888 PMS1P54277 932 aaKnown RBP5.68□□□□□ -1.5
CKS1BP3-201ENST00000600888 CASP7P55210 303 aa5.68□□□□□ -1.5
CKS1BP3-201ENST00000600888 IKZF1Q13422 519 aa5.68□□□□□ -1.5
CKS1BP3-201ENST00000600888 PPP2R5EQ16537 467 aa5.68□□□□□ -1.5
CKS1BP3-201ENST00000600888 ANGEL2Q5VTE6 544 aaKnown RBP5.68□□□□□ -1.5
CKS1BP3-201ENST00000600888 AGBL5Q8NDL9 886 aa5.68□□□□□ -1.5
CKS1BP3-201ENST00000600888 C8orf37Q96NL8 207 aa5.68□□□□□ -1.5
CKS1BP3-201ENST00000600888 MKRN2Q9H000 416 aaKnown RBP5.68□□□□□ -1.5
CKS1BP3-201ENST00000600888 GPATCH2Q9NW75 528 aa5.68□□□□□ -1.5
CKS1BP3-201ENST00000600888 ZNF214Q9UL59 606 aaPredicted RBP5.68□□□□□ -1.5
CKS1BP3-201ENST00000600888 SLC12A7Q9Y666 1083 aa5.68□□□□□ -1.5
CKS1BP3-201ENST00000600888 OAS3Q9Y6K5 1087 aaKnown RBP5.68□□□□□ -1.5
CKS1BP3-201ENST00000600888 CTTNBP2Q8WZ74 1663 aa5.68□□□□□ -1.5
CKS1BP3-201ENST00000600888 IQGAP2Q13576 1575 aa5.67□□□□□ -1.5
CKS1BP3-201ENST00000600888 KIF13AQ9H1H9 1805 aa5.67□□□□□ -1.5
CKS1BP3-201ENST00000600888 SHISA3A0PJX4 238 aa5.67□□□□□ -1.5
CKS1BP3-201ENST00000600888 C9IYK1 514 aa5.67□□□□□ -1.5
CKS1BP3-201ENST00000600888 FUT4P22083 530 aa5.67□□□□□ -1.5
CKS1BP3-201ENST00000600888 TPP2P29144 1249 aaPredicted RBP5.67□□□□□ -1.5
CKS1BP3-201ENST00000600888 SNW1Q13573 536 aaKnown RBP5.67□□□□□ -1.5
CKS1BP3-201ENST00000600888 AUHQ13825 339 aaKnown RBP5.67□□□□□ -1.5
CKS1BP3-201ENST00000600888 BBS9Q3SYG4 887 aa5.67□□□□□ -1.5
CKS1BP3-201ENST00000600888 TSPYL5Q86VY4 417 aaPredicted RBP5.67□□□□□ -1.5
CKS1BP3-201ENST00000600888 PPFIBP1Q86W92 1011 aa5.67□□□□□ -1.5
CKS1BP3-201ENST00000600888 ENOX1Q8TC92 643 aaKnown RBP5.67□□□□□ -1.5
CKS1BP3-201ENST00000600888 ASCC2Q9H1I8 757 aaPredicted RBP5.67□□□□□ -1.5
CKS1BP3-201ENST00000600888 LMCD1Q9NZU5 365 aa5.67□□□□□ -1.5
CKS1BP3-201ENST00000600888 RAPGEF2Q9Y4G8 1499 aa5.66□□□□□ -1.5
CKS1BP3-201ENST00000600888 LOC100996750A0A140TA64 210 aa5.66□□□□□ -1.5
CKS1BP3-201ENST00000600888 SMAD7O15105 426 aaKnown RBP5.66□□□□□ -1.5
CKS1BP3-201ENST00000600888 TP53P04637 393 aaPredicted RBP5.66□□□□□ -1.5
CKS1BP3-201ENST00000600888 ZP2Q05996 745 aa5.66□□□□□ -1.5
CKS1BP3-201ENST00000600888 NMIQ13287 307 aaPredicted RBP5.66□□□□□ -1.5
CKS1BP3-201ENST00000600888 PLCL1Q15111 1095 aa5.66□□□□□ -1.5
CKS1BP3-201ENST00000600888 CLEC16AQ2KHT3 1053 aa5.66□□□□□ -1.5
CKS1BP3-201ENST00000600888 GAB4Q2WGN9 574 aa5.66□□□□□ -1.5
CKS1BP3-201ENST00000600888 ANKRD39Q53RE8 183 aa5.66□□□□□ -1.5
CKS1BP3-201ENST00000600888 TDRD10Q5VZ19 366 aaKnown RBP5.66□□□□□ -1.5
CKS1BP3-201ENST00000600888 TMPRSS7Q7RTY8 843 aa5.66□□□□□ -1.5
CKS1BP3-201ENST00000600888 TMC3Q7Z5M5 1100 aa5.66□□□□□ -1.5
CKS1BP3-201ENST00000600888 CCDC144CPQ8IYA2 1237 aa5.66□□□□□ -1.5
CKS1BP3-201ENST00000600888 ABI1Q8IZP0 508 aa5.66□□□□□ -1.5
CKS1BP3-201ENST00000600888 SMARCC1Q92922 1105 aaPredicted RBP5.66□□□□□ -1.5
CKS1BP3-201ENST00000600888 KRTAP4-6Q9BYQ5 205 aa5.66□□□□□ -1.5
CKS1BP3-201ENST00000600888 PRDM14Q9GZV8 571 aa5.66□□□□□ -1.5
CKS1BP3-201ENST00000600888 PHAXQ9H814 394 aaKnown RBP5.66□□□□□ -1.5
CKS1BP3-201ENST00000600888 ZNF408Q9H9D4 720 aa5.66□□□□□ -1.5
CKS1BP3-201ENST00000600888 PCDHB10Q9UN67 800 aa5.66□□□□□ -1.5
CKS1BP3-201ENST00000600888 ESR1P03372 595 aa5.65□□□□□ -1.5
CKS1BP3-201ENST00000600888 GNPTABQ3T906 1256 aa5.65□□□□□ -1.5
CKS1BP3-201ENST00000600888 AXDND1Q5T1B0 1012 aaPredicted RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms