RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 TSPY3P0CV98 308 aa12.5□□□□□ -0.41
CCDC9-203ENST00000596938 TSPY8P0CW00 308 aa12.5□□□□□ -0.41
CCDC9-203ENST00000596938 ZKSCAN1P17029 563 aaPredicted RBP12.5□□□□□ -0.41
CCDC9-203ENST00000596938 ERCC3P19447 782 aa12.5□□□□□ -0.41
CCDC9-203ENST00000596938 SDSP20132 328 aa12.5□□□□□ -0.41
CCDC9-203ENST00000596938 TFAP4Q01664 338 aa12.5□□□□□ -0.41
CCDC9-203ENST00000596938 TMEM132BQ14DG7 1078 aa12.5□□□□□ -0.41
CCDC9-203ENST00000596938 FAM83BQ5T0W9 1011 aa12.5□□□□□ -0.41
CCDC9-203ENST00000596938 WDR78Q5VTH9 848 aa12.5□□□□□ -0.41
CCDC9-203ENST00000596938 ABRAQ8N0Z2 381 aa12.5□□□□□ -0.41
CCDC9-203ENST00000596938 GMCL1P1Q8NEA9 526 aa12.5□□□□□ -0.41
CCDC9-203ENST00000596938 CEP95Q96GE4 821 aa12.5□□□□□ -0.41
CCDC9-203ENST00000596938 PPP1R9AQ9ULJ8 1098 aa12.5□□□□□ -0.41
CCDC9-203ENST00000596938 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.5□□□□□ -0.41
CCDC9-203ENST00000596938 RBBP6Q7Z6E9 1792 aaKnown RBP12.49□□□□□ -0.41
CCDC9-203ENST00000596938 PLIN4Q96Q06 1357 aa12.49□□□□□ -0.41
CCDC9-203ENST00000596938 NDUFB10O96000 172 aa12.49□□□□□ -0.41
CCDC9-203ENST00000596938 IGHA2P01877 340 aa12.49□□□□□ -0.41
CCDC9-203ENST00000596938 HSPD1P10809 573 aaKnown RBP12.49□□□□□ -0.41
CCDC9-203ENST00000596938 PRKAR2AP13861 404 aaKnown RBP12.49□□□□□ -0.41
CCDC9-203ENST00000596938 MFAP1P55081 439 aaKnown RBP12.49□□□□□ -0.41
CCDC9-203ENST00000596938 CACNB2Q08289 660 aaPredicted RBP12.49□□□□□ -0.41
CCDC9-203ENST00000596938 NMIQ13287 307 aaPredicted RBP12.49□□□□□ -0.41
CCDC9-203ENST00000596938 CCL14Q16627 93 aa12.49□□□□□ -0.41
CCDC9-203ENST00000596938 FAM47AQ5JRC9 791 aa12.49□□□□□ -0.41
CCDC9-203ENST00000596938 PRPF38AQ8NAV1 312 aaKnown RBP12.49□□□□□ -0.41
CCDC9-203ENST00000596938 FBXO28Q9NVF7 368 aa12.49□□□□□ -0.41
CCDC9-203ENST00000596938 MGAMO43451 1857 aa12.48□□□□□ -0.41
CCDC9-203ENST00000596938 ZMYM6O95789 1325 aa12.48□□□□□ -0.41
CCDC9-203ENST00000596938 HIP1O00291 1037 aa12.48□□□□□ -0.41
CCDC9-203ENST00000596938 ORC4O43929 436 aa12.48□□□□□ -0.41
CCDC9-203ENST00000596938 RAD21O60216 631 aa12.48□□□□□ -0.41
CCDC9-203ENST00000596938 FARP2O94887 1054 aaPredicted RBP12.48□□□□□ -0.41
CCDC9-203ENST00000596938 ADORA2AP29274 412 aa12.48□□□□□ -0.41
CCDC9-203ENST00000596938 COPB2P35606 906 aa12.48□□□□□ -0.41
CCDC9-203ENST00000596938 STAT3P40763 770 aa12.48□□□□□ -0.41
CCDC9-203ENST00000596938 NOVP48745 357 aa12.48□□□□□ -0.41
CCDC9-203ENST00000596938 CTDSPL2Q05D32 466 aa12.48□□□□□ -0.41
CCDC9-203ENST00000596938 PLS1Q14651 629 aa12.48□□□□□ -0.41
CCDC9-203ENST00000596938 MFSD14CQ5VZR4 134 aa12.48□□□□□ -0.41
CCDC9-203ENST00000596938 DPP9Q86TI2 863 aa12.48□□□□□ -0.41
CCDC9-203ENST00000596938 ZNF589Q86UQ0 364 aaPredicted RBP12.48□□□□□ -0.41
CCDC9-203ENST00000596938 RIOX2Q8IUF8 465 aa12.48□□□□□ -0.41
CCDC9-203ENST00000596938 ANKLE1Q8NAG6 615 aa12.48□□□□□ -0.41
CCDC9-203ENST00000596938 REPS2Q8NFH8 660 aa12.48□□□□□ -0.41
CCDC9-203ENST00000596938 SLF1Q9BQI6 1058 aa12.48□□□□□ -0.41
CCDC9-203ENST00000596938 HTATIP2Q9BUP3 242 aa12.48□□□□□ -0.41
CCDC9-203ENST00000596938 INCENPQ9NQS7 918 aa12.48□□□□□ -0.41
CCDC9-203ENST00000596938 FEM1BQ9UK73 627 aa12.48□□□□□ -0.41
CCDC9-203ENST00000596938 OGDHLQ9ULD0 1010 aa12.48□□□□□ -0.41
CCDC9-203ENST00000596938 MYH7P12883 1935 aa12.48□□□□□ -0.41
CCDC9-203ENST00000596938 BAZ2AQ9UIF9 1905 aaKnown RBP12.47□□□□□ -0.41
CCDC9-203ENST00000596938 CCDC171Q6TFL3 1326 aa12.47□□□□□ -0.41
CCDC9-203ENST00000596938 TSPY2A6NKD2 308 aa12.47□□□□□ -0.41
CCDC9-203ENST00000596938 ATP2A1O14983 1001 aa12.47□□□□□ -0.41
CCDC9-203ENST00000596938 COBLO75128 1261 aa12.47□□□□□ -0.41
CCDC9-203ENST00000596938 FCER1AP12319 257 aa12.47□□□□□ -0.41
CCDC9-203ENST00000596938 OLFML2BQ68BL8 750 aa12.47□□□□□ -0.41
CCDC9-203ENST00000596938 NCAPG2Q86XI2 1143 aa12.47□□□□□ -0.41
CCDC9-203ENST00000596938 NPLOC4Q8TAT6 608 aa12.47□□□□□ -0.41
CCDC9-203ENST00000596938 GMCL1Q96IK5 515 aa12.47□□□□□ -0.41
CCDC9-203ENST00000596938 NUP88Q99567 741 aaPredicted RBP12.47□□□□□ -0.41
CCDC9-203ENST00000596938 IL17RBQ9NRM6 502 aa12.47□□□□□ -0.41
CCDC9-203ENST00000596938 SLC5A4Q9NY91 659 aa12.47□□□□□ -0.41
CCDC9-203ENST00000596938 FLRT1Q9NZU1 646 aa12.47□□□□□ -0.41
CCDC9-203ENST00000596938 ZNF214Q9UL59 606 aaPredicted RBP12.47□□□□□ -0.41
CCDC9-203ENST00000596938 TACC3Q9Y6A5 838 aa12.47□□□□□ -0.41
CCDC9-203ENST00000596938 PDE4DIPQ5VU43 2346 aa12.46□□□□□ -0.41
CCDC9-203ENST00000596938 RANBP6O60518 1105 aaKnown RBP12.46□□□□□ -0.41
CCDC9-203ENST00000596938 ZBED4O75132 1171 aa12.46□□□□□ -0.41
CCDC9-203ENST00000596938 FDX1P10109 184 aa12.46□□□□□ -0.41
CCDC9-203ENST00000596938 PCP11498 1178 aaKnown RBP12.46□□□□□ -0.41
CCDC9-203ENST00000596938 BMP3P12645 472 aa12.46□□□□□ -0.41
CCDC9-203ENST00000596938 IRX6P78412 446 aaPredicted RBP12.46□□□□□ -0.41
CCDC9-203ENST00000596938 SLFN13Q68D06 897 aa12.46□□□□□ -0.41
CCDC9-203ENST00000596938 LHX8Q68G74 356 aa12.46□□□□□ -0.41
CCDC9-203ENST00000596938 SAMD1Q6SPF0 538 aaPredicted RBP12.46□□□□□ -0.41
CCDC9-203ENST00000596938 NECAB2Q7Z6G3 386 aa12.46□□□□□ -0.41
CCDC9-203ENST00000596938 DPF3Q92784 378 aa12.46□□□□□ -0.41
CCDC9-203ENST00000596938 DIAPH3Q9NSV4 1193 aa12.46□□□□□ -0.41
CCDC9-203ENST00000596938 TCP11L1Q9NUJ3 509 aa12.46□□□□□ -0.41
CCDC9-203ENST00000596938 PLA2G6O60733 806 aa12.45□□□□□ -0.42
CCDC9-203ENST00000596938 PDE4AP27815 886 aa12.45□□□□□ -0.42
CCDC9-203ENST00000596938 CCND3P30281 292 aaPredicted RBP12.45□□□□□ -0.42
CCDC9-203ENST00000596938 NT5C2P49902 561 aa12.45□□□□□ -0.42
CCDC9-203ENST00000596938 MNX1P50219 401 aaPredicted RBP12.45□□□□□ -0.42
CCDC9-203ENST00000596938 OAZ1P54368 228 aa12.45□□□□□ -0.42
CCDC9-203ENST00000596938 CWC27Q6UX04 472 aaKnown RBP12.45□□□□□ -0.42
CCDC9-203ENST00000596938 LRRC47Q8N1G4 583 aaKnown RBP12.45□□□□□ -0.42
CCDC9-203ENST00000596938 CHURC1Q8WUH1 139 aa12.45□□□□□ -0.42
CCDC9-203ENST00000596938 PAWRQ96IZ0 340 aaKnown RBP12.45□□□□□ -0.42
CCDC9-203ENST00000596938 TEX13BQ9BXU2 312 aa12.45□□□□□ -0.42
CCDC9-203ENST00000596938 SLC38A10Q9HBR0 1119 aa12.45□□□□□ -0.42
CCDC9-203ENST00000596938 STX8Q9UNK0 236 aa12.45□□□□□ -0.42
CCDC9-203ENST00000596938 DIS3Q9Y2L1 958 aaKnown RBP12.45□□□□□ -0.42
CCDC9-203ENST00000596938 DOCK3Q8IZD9 2030 aa12.44□□□□□ -0.42
CCDC9-203ENST00000596938 NMT2O60551 498 aa12.44□□□□□ -0.42
CCDC9-203ENST00000596938 MSCO60682 206 aa12.44□□□□□ -0.42
CCDC9-203ENST00000596938 CYP2C19P33261 490 aa12.44□□□□□ -0.42
CCDC9-203ENST00000596938 KCTD2Q14681 263 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms