RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 NDUFB10O96000 172 aa26.51■■□□□ 1.83
GTF2F1-204ENST00000594965 GJB1P08034 283 aa26.51■■□□□ 1.83
GTF2F1-204ENST00000594965 TRIM32Q13049 653 aa26.51■■□□□ 1.83
GTF2F1-204ENST00000594965 NUP88Q99567 741 aaPredicted RBP26.51■■□□□ 1.83
GTF2F1-204ENST00000594965 SPATC1LQ9H0A9 340 aa26.51■■□□□ 1.83
GTF2F1-204ENST00000594965 TTLL1O95922 423 aa26.5■■□□□ 1.83
GTF2F1-204ENST00000594965 HMGCRP04035 888 aa26.5■■□□□ 1.83
GTF2F1-204ENST00000594965 XRCC5P13010 732 aaKnown RBP26.5■■□□□ 1.83
GTF2F1-204ENST00000594965 PTPREP23469 700 aa26.5■■□□□ 1.83
GTF2F1-204ENST00000594965 MB21D1Q8N884 522 aa26.5■■□□□ 1.83
GTF2F1-204ENST00000594965 IL17RBQ9NRM6 502 aa26.5■■□□□ 1.83
GTF2F1-204ENST00000594965 ORC4O43929 436 aa26.49■■□□□ 1.83
GTF2F1-204ENST00000594965 RGS2P41220 211 aa26.49■■□□□ 1.83
GTF2F1-204ENST00000594965 GJA8P48165 433 aa26.49■■□□□ 1.83
GTF2F1-204ENST00000594965 SAMD1Q6SPF0 538 aaPredicted RBP26.49■■□□□ 1.83
GTF2F1-204ENST00000594965 LRRC47Q8N1G4 583 aaKnown RBP26.49■■□□□ 1.83
GTF2F1-204ENST00000594965 NBPF3Q9H094 633 aa26.49■■□□□ 1.83
GTF2F1-204ENST00000594965 DIAPH3Q9NSV4 1193 aa26.49■■□□□ 1.83
GTF2F1-204ENST00000594965 PPP1R9AQ9ULJ8 1098 aa26.49■■□□□ 1.83
GTF2F1-204ENST00000594965 SYNPO2Q9UMS6 1093 aa26.49■■□□□ 1.83
GTF2F1-204ENST00000594965 SLC15A5A6NIM6 579 aa26.48■■□□□ 1.83
GTF2F1-204ENST00000594965 HIP1O00291 1037 aa26.48■■□□□ 1.83
GTF2F1-204ENST00000594965 MAP2K5Q13163 448 aa26.48■■□□□ 1.83
GTF2F1-204ENST00000594965 TMEM132BQ14DG7 1078 aa26.48■■□□□ 1.83
GTF2F1-204ENST00000594965 WDR78Q5VTH9 848 aa26.48■■□□□ 1.83
GTF2F1-204ENST00000594965 PAK6Q9NQU5 681 aaPredicted RBP26.48■■□□□ 1.83
GTF2F1-204ENST00000594965 PDE4DIPQ5VU43 2346 aa26.48■■□□□ 1.83
GTF2F1-204ENST00000594965 NMT2O60551 498 aa26.47■■□□□ 1.83
GTF2F1-204ENST00000594965 ERCC3P19447 782 aa26.47■■□□□ 1.83
GTF2F1-204ENST00000594965 MFAP1P55081 439 aaKnown RBP26.47■■□□□ 1.83
GTF2F1-204ENST00000594965 HAND2P61296 217 aa26.47■■□□□ 1.83
GTF2F1-204ENST00000594965 GRB14Q14449 540 aa26.47■■□□□ 1.83
GTF2F1-204ENST00000594965 CCL14Q16627 93 aa26.47■■□□□ 1.83
GTF2F1-204ENST00000594965 GMCL1P1Q8NEA9 526 aa26.47■■□□□ 1.83
GTF2F1-204ENST00000594965 SHCBP1Q8NEM2 672 aa26.47■■□□□ 1.83
GTF2F1-204ENST00000594965 REPS2Q8NFH8 660 aa26.47■■□□□ 1.83
GTF2F1-204ENST00000594965 U2AF1L4Q8WU68 220 aaKnown RBP26.47■■□□□ 1.83
GTF2F1-204ENST00000594965 IL25Q9H293 177 aa26.47■■□□□ 1.83
GTF2F1-204ENST00000594965 CWC22Q9HCG8 908 aaKnown RBP26.47■■□□□ 1.83
GTF2F1-204ENST00000594965 TSPY2A6NKD2 308 aa26.46■■□□□ 1.83
GTF2F1-204ENST00000594965 PLS1Q14651 629 aa26.46■■□□□ 1.83
GTF2F1-204ENST00000594965 NKX2-3Q8TAU0 364 aa26.46■■□□□ 1.83
GTF2F1-204ENST00000594965 APBA2Q99767 749 aa26.46■■□□□ 1.83
GTF2F1-204ENST00000594965 VWA5AO00534 786 aa26.45■■□□□ 1.82
GTF2F1-204ENST00000594965 RANBP6O60518 1105 aaKnown RBP26.45■■□□□ 1.82
GTF2F1-204ENST00000594965 SGPL1O95470 568 aa26.45■■□□□ 1.82
GTF2F1-204ENST00000594965 NOVP48745 357 aa26.45■■□□□ 1.82
GTF2F1-204ENST00000594965 MAP3K21Q5TCX8 1036 aa26.45■■□□□ 1.82
GTF2F1-204ENST00000594965 SLF1Q9BQI6 1058 aa26.45■■□□□ 1.82
GTF2F1-204ENST00000594965 PLXNA1Q9UIW2 1896 aa26.45■■□□□ 1.82
GTF2F1-204ENST00000594965 ZKSCAN1P17029 563 aaPredicted RBP26.44■■□□□ 1.82
GTF2F1-204ENST00000594965 SLFN13Q68D06 897 aa26.44■■□□□ 1.82
GTF2F1-204ENST00000594965 TBC1D10CQ8IV04 446 aa26.44■■□□□ 1.82
GTF2F1-204ENST00000594965 NPLOC4Q8TAT6 608 aa26.44■■□□□ 1.82
GTF2F1-204ENST00000594965 DEFB118Q96PH6 123 aa26.44■■□□□ 1.82
GTF2F1-204ENST00000594965 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.44■■□□□ 1.82
GTF2F1-204ENST00000594965 FLRT1Q9NZU1 646 aa26.44■■□□□ 1.82
GTF2F1-204ENST00000594965 ZNF214Q9UL59 606 aaPredicted RBP26.44■■□□□ 1.82
GTF2F1-204ENST00000594965 IVNS1ABPQ9Y6Y0 642 aa26.44■■□□□ 1.82
GTF2F1-204ENST00000594965 MKI67P46013 3256 aaKnown RBP26.44■■□□□ 1.82
GTF2F1-204ENST00000594965 FRMPD3Q5JV73 1810 aa26.44■■□□□ 1.82
GTF2F1-204ENST00000594965 RPTORQ8N122 1335 aa26.43■■□□□ 1.82
GTF2F1-204ENST00000594965 HOXC6P09630 235 aa26.43■■□□□ 1.82
GTF2F1-204ENST00000594965 TRMT44Q8IYL2 757 aaKnown RBP26.43■■□□□ 1.82
GTF2F1-204ENST00000594965 MROH8Q9H579 483 aa26.43■■□□□ 1.82
GTF2F1-204ENST00000594965 RRP12Q5JTH9 1297 aaKnown RBP26.42■■□□□ 1.82
GTF2F1-204ENST00000594965 AKNAD1Q5T1N1 836 aa26.42■■□□□ 1.82
GTF2F1-204ENST00000594965 UBE2Q1Q7Z7E8 422 aa26.42■■□□□ 1.82
GTF2F1-204ENST00000594965 NCAPG2Q86XI2 1143 aa26.42■■□□□ 1.82
GTF2F1-204ENST00000594965 RIOX2Q8IUF8 465 aa26.42■■□□□ 1.82
GTF2F1-204ENST00000594965 STAG1Q8WVM7 1258 aa26.42■■□□□ 1.82
GTF2F1-204ENST00000594965 DSCC1Q9BVC3 393 aa26.42■■□□□ 1.82
GTF2F1-204ENST00000594965 CRISPLD2Q9H0B8 497 aa26.42■■□□□ 1.82
GTF2F1-204ENST00000594965 STX8Q9UNK0 236 aa26.42■■□□□ 1.82
GTF2F1-204ENST00000594965 STRNO43815 780 aa26.41■■□□□ 1.82
GTF2F1-204ENST00000594965 IGHA2P01877 340 aa26.41■■□□□ 1.82
GTF2F1-204ENST00000594965 PRKAR2AP13861 404 aaKnown RBP26.41■■□□□ 1.82
GTF2F1-204ENST00000594965 CACNB2Q08289 660 aaPredicted RBP26.41■■□□□ 1.82
GTF2F1-204ENST00000594965 PRPF38AQ8NAV1 312 aaKnown RBP26.41■■□□□ 1.82
GTF2F1-204ENST00000594965 HMX1Q9NP08 348 aaPredicted RBP26.41■■□□□ 1.82
GTF2F1-204ENST00000594965 TOMM22Q9NS69 142 aa26.41■■□□□ 1.82
GTF2F1-204ENST00000594965 COBLO75128 1261 aa26.4■■□□□ 1.82
GTF2F1-204ENST00000594965 SLC25A27O95847 323 aa26.4■■□□□ 1.82
GTF2F1-204ENST00000594965 BMP3P12645 472 aa26.4■■□□□ 1.82
GTF2F1-204ENST00000594965 ADORA2AP29274 412 aa26.4■■□□□ 1.82
GTF2F1-204ENST00000594965 STAT3P40763 770 aa26.4■■□□□ 1.82
GTF2F1-204ENST00000594965 PPP4R3BQ5MIZ7 849 aa26.4■■□□□ 1.82
GTF2F1-204ENST00000594965 MFSD6Q6ZSS7 791 aa26.4■■□□□ 1.82
GTF2F1-204ENST00000594965 TCP11L1Q9NUJ3 509 aa26.4■■□□□ 1.82
GTF2F1-204ENST00000594965 FEM1BQ9UK73 627 aa26.4■■□□□ 1.82
GTF2F1-204ENST00000594965 NEDD4P46934 1319 aa26.39■■□□□ 1.82
GTF2F1-204ENST00000594965 RASGRP2Q7LDG7 609 aa26.39■■□□□ 1.82
GTF2F1-204ENST00000594965 ZNF213O14771 459 aa26.38■■□□□ 1.81
GTF2F1-204ENST00000594965 PCP11498 1178 aaKnown RBP26.38■■□□□ 1.81
GTF2F1-204ENST00000594965 CHMLP26374 656 aa26.38■■□□□ 1.81
GTF2F1-204ENST00000594965 ABRAQ8N0Z2 381 aa26.38■■□□□ 1.81
GTF2F1-204ENST00000594965 CHMP4CQ96CF2 233 aa26.38■■□□□ 1.81
GTF2F1-204ENST00000594965 GMCL1Q96IK5 515 aa26.38■■□□□ 1.81
GTF2F1-204ENST00000594965 TFRCP02786 760 aaKnown RBP26.37■■□□□ 1.81
GTF2F1-204ENST00000594965 MCCP23508 829 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms