RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 USP17L19D6RCP7 530 aa19.94■□□□□ 0.78
RPRD1A-209ENST00000590898 USP17L20D6RJB6 530 aa19.94■□□□□ 0.78
RPRD1A-209ENST00000590898 DDAH1O94760 285 aa19.94■□□□□ 0.78
RPRD1A-209ENST00000590898 PDHBP11177 359 aa19.94■□□□□ 0.78
RPRD1A-209ENST00000590898 SLC1A4P43007 532 aa19.94■□□□□ 0.78
RPRD1A-209ENST00000590898 USP17L24Q0WX57 530 aa19.94■□□□□ 0.78
RPRD1A-209ENST00000590898 DGKZQ13574 1117 aa19.94■□□□□ 0.78
RPRD1A-209ENST00000590898 TOB2Q14106 344 aaPredicted RBP19.94■□□□□ 0.78
RPRD1A-209ENST00000590898 SYNE3Q6ZMZ3 975 aa19.94■□□□□ 0.78
RPRD1A-209ENST00000590898 ZNF654Q8IZM8 581 aa19.94■□□□□ 0.78
RPRD1A-209ENST00000590898 SPICE1Q8N0Z3 855 aa19.94■□□□□ 0.78
RPRD1A-209ENST00000590898 BRF1Q92994 677 aa19.94■□□□□ 0.78
RPRD1A-209ENST00000590898 BTBD19C9JJ37 291 aa19.94■□□□□ 0.78
RPRD1A-209ENST00000590898 RAD21O60216 631 aa19.94■□□□□ 0.78
RPRD1A-209ENST00000590898 PLA2G6O60733 806 aa19.94■□□□□ 0.78
RPRD1A-209ENST00000590898 CD2BP2O95400 341 aaKnown RBP19.94■□□□□ 0.78
RPRD1A-209ENST00000590898 CALM1P0DP23 149 aa19.94■□□□□ 0.78
RPRD1A-209ENST00000590898 CALM2P0DP24 149 aa19.94■□□□□ 0.78
RPRD1A-209ENST00000590898 CALM3P0DP25 149 aa19.94■□□□□ 0.78
RPRD1A-209ENST00000590898 BMP3P12645 472 aa19.94■□□□□ 0.78
RPRD1A-209ENST00000590898 IFNL1Q8IU54 200 aa19.94■□□□□ 0.78
RPRD1A-209ENST00000590898 DAXXQ9UER7 740 aaPredicted RBP19.94■□□□□ 0.78
RPRD1A-209ENST00000590898 THSD7BQ9C0I4 1608 aa19.93■□□□□ 0.78
RPRD1A-209ENST00000590898 TREML2Q5T2D2 321 aa19.93■□□□□ 0.78
RPRD1A-209ENST00000590898 GPATCH4Q5T3I0 446 aaKnown RBP19.93■□□□□ 0.78
RPRD1A-209ENST00000590898 APOA5Q6Q788 366 aa19.93■□□□□ 0.78
RPRD1A-209ENST00000590898 CATSPERGQ6ZRH7 1159 aa19.93■□□□□ 0.78
RPRD1A-209ENST00000590898 ALDH1A1P00352 501 aa19.92■□□□□ 0.78
RPRD1A-209ENST00000590898 BECN1Q14457 450 aa19.92■□□□□ 0.78
RPRD1A-209ENST00000590898 PPP2R5BQ15173 497 aa19.92■□□□□ 0.78
RPRD1A-209ENST00000590898 RPAP3Q9H6T3 665 aaPredicted RBP19.92■□□□□ 0.78
RPRD1A-209ENST00000590898 BRPF3Q9ULD4 1205 aa19.92■□□□□ 0.78
RPRD1A-209ENST00000590898 RLFQ13129 1914 aa19.92■□□□□ 0.78
RPRD1A-209ENST00000590898 ZNF543Q08ER8 600 aa19.92■□□□□ 0.78
RPRD1A-209ENST00000590898 ASPRV1Q53RT3 343 aa19.92■□□□□ 0.78
RPRD1A-209ENST00000590898 FAM83BQ5T0W9 1011 aa19.92■□□□□ 0.78
RPRD1A-209ENST00000590898 ZNF274Q96GC6 653 aaPredicted RBP19.92■□□□□ 0.78
RPRD1A-209ENST00000590898 HOXC10Q9NYD6 342 aa19.92■□□□□ 0.78
RPRD1A-209ENST00000590898 PNMA3Q9UL41 463 aa19.92■□□□□ 0.78
RPRD1A-209ENST00000590898 PARP14Q460N5 1801 aa19.91■□□□□ 0.78
RPRD1A-209ENST00000590898 KLF18A0A0U1RQI7 1052 aa19.91■□□□□ 0.78
RPRD1A-209ENST00000590898 PDHXO00330 501 aa19.91■□□□□ 0.78
RPRD1A-209ENST00000590898 IGF2BP3O00425 579 aaKnown RBP eCLIP19.91■□□□□ 0.78
RPRD1A-209ENST00000590898 ST18O60284 1047 aa19.91■□□□□ 0.78
RPRD1A-209ENST00000590898 PARP1P09874 1014 aaKnown RBP19.91■□□□□ 0.78
RPRD1A-209ENST00000590898 OSBPP22059 807 aa19.91■□□□□ 0.78
RPRD1A-209ENST00000590898 AK2P54819 239 aa19.91■□□□□ 0.78
RPRD1A-209ENST00000590898 APOBRQ0VD83 1088 aa19.91■□□□□ 0.78
RPRD1A-209ENST00000590898 FAM43AQ8N2R8 423 aa19.91■□□□□ 0.78
RPRD1A-209ENST00000590898 CHURC1Q8WUH1 139 aa19.91■□□□□ 0.78
RPRD1A-209ENST00000590898 FEM1BQ9UK73 627 aa19.91■□□□□ 0.78
RPRD1A-209ENST00000590898 MYPNQ86TC9 1320 aa19.9■□□□□ 0.78
RPRD1A-209ENST00000590898 PALM3A6NDB9 673 aaPredicted RBP19.9■□□□□ 0.78
RPRD1A-209ENST00000590898 ZBTB43O43298 467 aa19.9■□□□□ 0.78
RPRD1A-209ENST00000590898 KIF5BP33176 963 aa19.9■□□□□ 0.78
RPRD1A-209ENST00000590898 COG2Q14746 738 aa19.9■□□□□ 0.78
RPRD1A-209ENST00000590898 GRM4Q14833 912 aa19.9■□□□□ 0.78
RPRD1A-209ENST00000590898 MTMR7Q9Y216 660 aa19.9■□□□□ 0.78
RPRD1A-209ENST00000590898 BTNL9Q6UXG8 535 aa19.9■□□□□ 0.78
RPRD1A-209ENST00000590898 FAM160B2Q86V87 743 aa19.9■□□□□ 0.78
RPRD1A-209ENST00000590898 FANCBQ8NB91 859 aa19.9■□□□□ 0.78
RPRD1A-209ENST00000590898 NUP133Q8WUM0 1156 aa19.9■□□□□ 0.78
RPRD1A-209ENST00000590898 NUP88Q99567 741 aaPredicted RBP19.9■□□□□ 0.78
RPRD1A-209ENST00000590898 TANGO6Q9C0B7 1094 aa19.9■□□□□ 0.78
RPRD1A-209ENST00000590898 BAZ2BQ9UIF8 2168 aaKnown RBP19.89■□□□□ 0.77
RPRD1A-209ENST00000590898 STAT2P52630 851 aa19.89■□□□□ 0.77
RPRD1A-209ENST00000590898 IRX3P78415 501 aaPredicted RBP19.89■□□□□ 0.77
RPRD1A-209ENST00000590898 KCTD1Q719H9 257 aa19.89■□□□□ 0.77
RPRD1A-209ENST00000590898 PRPF38AQ8NAV1 312 aaKnown RBP19.89■□□□□ 0.77
RPRD1A-209ENST00000590898 CTCFLQ8NI51 663 aaPredicted RBP19.89■□□□□ 0.77
RPRD1A-209ENST00000590898 ASCC2Q9H1I8 757 aaPredicted RBP19.89■□□□□ 0.77
RPRD1A-209ENST00000590898 MAD2L2Q9UI95 211 aa19.89■□□□□ 0.77
RPRD1A-209ENST00000590898 TMEM232C9JQI7 657 aa19.88■□□□□ 0.77
RPRD1A-209ENST00000590898 PDIA3P30101 505 aaKnown RBP19.88■□□□□ 0.77
RPRD1A-209ENST00000590898 GNAQP50148 359 aa19.88■□□□□ 0.77
RPRD1A-209ENST00000590898 MAP2K1Q02750 393 aaPredicted RBP19.88■□□□□ 0.77
RPRD1A-209ENST00000590898 CCDC96Q2M329 555 aa19.88■□□□□ 0.77
RPRD1A-209ENST00000590898 LBX2Q6XYB7 198 aa19.88■□□□□ 0.77
RPRD1A-209ENST00000590898 CCDC196A0A1B0GTZ2 297 aa19.88■□□□□ 0.77
RPRD1A-209ENST00000590898 FLOT1O75955 427 aa19.88■□□□□ 0.77
RPRD1A-209ENST00000590898 FDX1P10109 184 aa19.88■□□□□ 0.77
RPRD1A-209ENST00000590898 SMARCA1P28370 1054 aa19.88■□□□□ 0.77
RPRD1A-209ENST00000590898 MCM2P49736 904 aa19.88■□□□□ 0.77
RPRD1A-209ENST00000590898 MICU3Q86XE3 530 aa19.88■□□□□ 0.77
RPRD1A-209ENST00000590898 PARK7Q99497 189 aaKnown RBP19.88■□□□□ 0.77
RPRD1A-209ENST00000590898 LZTS2Q9BRK4 669 aa19.88■□□□□ 0.77
RPRD1A-209ENST00000590898 MYL10Q9BUA6 226 aa19.88■□□□□ 0.77
RPRD1A-209ENST00000590898 RBM28Q9NW13 759 aaKnown RBP19.88■□□□□ 0.77
RPRD1A-209ENST00000590898 ADAMTS5Q9UNA0 930 aa19.88■□□□□ 0.77
RPRD1A-209ENST00000590898 NID2Q14112 1375 aa19.87■□□□□ 0.77
RPRD1A-209ENST00000590898 CA12O43570 354 aa19.87■□□□□ 0.77
RPRD1A-209ENST00000590898 DSG3P32926 999 aa19.87■□□□□ 0.77
RPRD1A-209ENST00000590898 RASGRP2Q7LDG7 609 aa19.87■□□□□ 0.77
RPRD1A-209ENST00000590898 SPRYD3Q8NCJ5 442 aa19.87■□□□□ 0.77
RPRD1A-209ENST00000590898 GTF3C2Q8WUA4 911 aaPredicted RBP19.87■□□□□ 0.77
RPRD1A-209ENST00000590898 P2RX7Q99572 595 aaKnown RBP19.87■□□□□ 0.77
RPRD1A-209ENST00000590898 SLF1Q9BQI6 1058 aa19.87■□□□□ 0.77
RPRD1A-209ENST00000590898 CFHR5Q9BXR6 569 aa19.87■□□□□ 0.77
RPRD1A-209ENST00000590898 PPP1R9AQ9ULJ8 1098 aa19.87■□□□□ 0.77
RPRD1A-209ENST00000590898 TPCN1Q9ULQ1 816 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 849 ms