RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	RASGRP2	Q7LDG7	609 aa		20.51	■□□□□ 0.87
MBD1-221	ENST00000589867	GPR142	Q7Z601	462 aa		20.51	■□□□□ 0.87
MBD1-221	ENST00000589867	GMCL1P1	Q8NEA9	526 aa		20.51	■□□□□ 0.87
MBD1-221	ENST00000589867	RAET1E	Q8TD07	263 aa		20.51	■□□□□ 0.87
MBD1-221	ENST00000589867	COA7	Q96BR5	231 aa		20.51	■□□□□ 0.87
MBD1-221	ENST00000589867	ELN	P15502	786 aa		20.5	■□□□□ 0.87
MBD1-221	ENST00000589867	CCDC136	Q96JN2	1154 aa		20.5	■□□□□ 0.87
MBD1-221	ENST00000589867	MOV10L1	Q9BXT6	1211 aa	Known RBP	20.5	■□□□□ 0.87
MBD1-221	ENST00000589867	PPP1R9A	Q9ULJ8	1098 aa		20.5	■□□□□ 0.87
MBD1-221	ENST00000589867	ADCY3	O60266	1144 aa		20.49	■□□□□ 0.87
MBD1-221	ENST00000589867	MAPK4	P31152	587 aa		20.49	■□□□□ 0.87
MBD1-221	ENST00000589867	TMEM132B	Q14DG7	1078 aa		20.49	■□□□□ 0.87
MBD1-221	ENST00000589867	RRP12	Q5JTH9	1297 aa	Known RBP	20.49	■□□□□ 0.87
MBD1-221	ENST00000589867	RCSD1	Q6JBY9	416 aa		20.49	■□□□□ 0.87
MBD1-221	ENST00000589867	TCP11L1	Q9NUJ3	509 aa		20.49	■□□□□ 0.87
MBD1-221	ENST00000589867	TAF6L	Q9Y6J9	622 aa		20.49	■□□□□ 0.87
MBD1-221	ENST00000589867	ZNF213	O14771	459 aa		20.48	■□□□□ 0.87
MBD1-221	ENST00000589867	BMP2KL	Q5H9B9	411 aa		20.48	■□□□□ 0.87
MBD1-221	ENST00000589867	MFSD6	Q6ZSS7	791 aa		20.48	■□□□□ 0.87
MBD1-221	ENST00000589867	SLAIN1	Q8ND83	568 aa		20.48	■□□□□ 0.87
MBD1-221	ENST00000589867	PXYLP1	Q8TE99	480 aa		20.48	■□□□□ 0.87
MBD1-221	ENST00000589867	SPATC1L	Q9H0A9	340 aa		20.48	■□□□□ 0.87
MBD1-221	ENST00000589867	VWA5A	O00534	786 aa		20.47	■□□□□ 0.87
MBD1-221	ENST00000589867	RAD21	O60216	631 aa		20.47	■□□□□ 0.87
MBD1-221	ENST00000589867	MYC	P01106	439 aa	Predicted RBP	20.47	■□□□□ 0.87
MBD1-221	ENST00000589867	PC	P11498	1178 aa	Known RBP	20.47	■□□□□ 0.87
MBD1-221	ENST00000589867	SLFN13	Q68D06	897 aa		20.47	■□□□□ 0.87
MBD1-221	ENST00000589867	PLEKHH3	Q7Z736	793 aa		20.47	■□□□□ 0.87
MBD1-221	ENST00000589867	MB21D1	Q8N884	522 aa		20.47	■□□□□ 0.87
MBD1-221	ENST00000589867	ZNF214	Q9UL59	606 aa	Predicted RBP	20.47	■□□□□ 0.87
MBD1-221	ENST00000589867	STX8	Q9UNK0	236 aa		20.47	■□□□□ 0.87
MBD1-221	ENST00000589867	TRIM32	Q13049	653 aa		20.46	■□□□□ 0.87
MBD1-221	ENST00000589867	SAMD1	Q6SPF0	538 aa	Predicted RBP	20.46	■□□□□ 0.87
MBD1-221	ENST00000589867	NBPF11	Q86T75	865 aa		20.46	■□□□□ 0.87
MBD1-221	ENST00000589867	RUFY2	Q8WXA3	655 aa		20.46	■□□□□ 0.87
MBD1-221	ENST00000589867	TMEM47	Q9BQJ4	181 aa		20.46	■□□□□ 0.87
MBD1-221	ENST00000589867	TOMM22	Q9NS69	142 aa		20.46	■□□□□ 0.87
MBD1-221	ENST00000589867	ZNFX1	Q9P2E3	1918 aa	Known RBP	20.46	■□□□□ 0.87
MBD1-221	ENST00000589867	PDE4DIP	Q5VU43	2346 aa		20.45	■□□□□ 0.87
MBD1-221	ENST00000589867	IGHA2	P01877	340 aa		20.45	■□□□□ 0.86
MBD1-221	ENST00000589867	INHA	P05111	366 aa		20.45	■□□□□ 0.86
MBD1-221	ENST00000589867	ERCC3	P19447	782 aa		20.45	■□□□□ 0.86
MBD1-221	ENST00000589867	EN2	P19622	333 aa	Predicted RBP	20.45	■□□□□ 0.86
MBD1-221	ENST00000589867	CYP2B6	P20813	491 aa		20.45	■□□□□ 0.86
MBD1-221	ENST00000589867	PTPRE	P23469	700 aa		20.45	■□□□□ 0.86
MBD1-221	ENST00000589867	CCNA1	P78396	465 aa		20.45	■□□□□ 0.86
MBD1-221	ENST00000589867	GRB14	Q14449	540 aa		20.45	■□□□□ 0.86
MBD1-221	ENST00000589867	SHCBP1	Q8NEM2	672 aa		20.45	■□□□□ 0.86
MBD1-221	ENST00000589867	TRIB2	Q92519	343 aa		20.45	■□□□□ 0.86
MBD1-221	ENST00000589867	CHMP4C	Q96CF2	233 aa		20.45	■□□□□ 0.86
MBD1-221	ENST00000589867	GMCL1	Q96IK5	515 aa		20.45	■□□□□ 0.86
MBD1-221	ENST00000589867	NUDT12	Q9BQG2	462 aa		20.45	■□□□□ 0.86
MBD1-221	ENST00000589867	SLF1	Q9BQI6	1058 aa		20.45	■□□□□ 0.86
MBD1-221	ENST00000589867	RNF41	Q9H4P4	317 aa	Predicted RBP	20.45	■□□□□ 0.86
MBD1-221	ENST00000589867	SMCHD1	A6NHR9	2005 aa		20.44	■□□□□ 0.86
MBD1-221	ENST00000589867	ZNF236	Q9UL36	1845 aa		20.44	■□□□□ 0.86
MBD1-221	ENST00000589867		B4E1Z4	1266 aa		20.44	■□□□□ 0.86
MBD1-221	ENST00000589867	CYP21A2	P08686	494 aa		20.44	■□□□□ 0.86
MBD1-221	ENST00000589867	BMP3	P12645	472 aa		20.44	■□□□□ 0.86
MBD1-221	ENST00000589867	MCC	P23508	829 aa		20.44	■□□□□ 0.86
MBD1-221	ENST00000589867	CCL14	Q16627	93 aa		20.44	■□□□□ 0.86
MBD1-221	ENST00000589867	IMMT	Q16891	758 aa	Known RBP	20.44	■□□□□ 0.86
MBD1-221	ENST00000589867	SOCS4	Q8WXH5	440 aa		20.44	■□□□□ 0.86
MBD1-221	ENST00000589867	MAP4K1	Q92918	833 aa		20.44	■□□□□ 0.86
MBD1-221	ENST00000589867	ESYT1	Q9BSJ8	1104 aa		20.44	■□□□□ 0.86
MBD1-221	ENST00000589867	LSG1	Q9H089	658 aa	Known RBP	20.44	■□□□□ 0.86
MBD1-221	ENST00000589867	UNC93B1	Q9H1C4	597 aa		20.44	■□□□□ 0.86
MBD1-221	ENST00000589867	CTNNA3	Q9UI47	895 aa		20.44	■□□□□ 0.86
MBD1-221	ENST00000589867	KDM4A	O75164	1064 aa		20.43	■□□□□ 0.86
MBD1-221	ENST00000589867	XRCC5	P13010	732 aa	Known RBP	20.43	■□□□□ 0.86
MBD1-221	ENST00000589867	CCL5	P13501	91 aa		20.43	■□□□□ 0.86
MBD1-221	ENST00000589867	MAP2K5	Q13163	448 aa		20.43	■□□□□ 0.86
MBD1-221	ENST00000589867	STOX1	Q6ZVD7	989 aa		20.43	■□□□□ 0.86
MBD1-221	ENST00000589867	ESR2	Q92731	530 aa		20.43	■□□□□ 0.86
MBD1-221	ENST00000589867	SHISA4	Q96DD7	197 aa		20.43	■□□□□ 0.86
MBD1-221	ENST00000589867	ZKSCAN3	Q9BRR0	538 aa		20.43	■□□□□ 0.86
MBD1-221	ENST00000589867	FLRT1	Q9NZU1	646 aa		20.43	■□□□□ 0.86
MBD1-221	ENST00000589867	ZSWIM5	Q9P217	1185 aa		20.43	■□□□□ 0.86
MBD1-221	ENST00000589867	FEM1B	Q9UK73	627 aa		20.43	■□□□□ 0.86
MBD1-221	ENST00000589867	SLC15A5	A6NIM6	579 aa		20.42	■□□□□ 0.86
MBD1-221	ENST00000589867	NEFL	P07196	543 aa		20.42	■□□□□ 0.86
MBD1-221	ENST00000589867	TOP1	P11387	765 aa	Known RBP	20.42	■□□□□ 0.86
MBD1-221	ENST00000589867	PLS1	Q14651	629 aa		20.42	■□□□□ 0.86
MBD1-221	ENST00000589867	PPP4R3B	Q5MIZ7	849 aa		20.42	■□□□□ 0.86
MBD1-221	ENST00000589867	KCTD1	Q719H9	257 aa		20.42	■□□□□ 0.86
MBD1-221	ENST00000589867	RIOX2	Q8IUF8	465 aa		20.42	■□□□□ 0.86
MBD1-221	ENST00000589867	PRPF38A	Q8NAV1	312 aa	Known RBP	20.42	■□□□□ 0.86
MBD1-221	ENST00000589867	NPLOC4	Q8TAT6	608 aa		20.42	■□□□□ 0.86
MBD1-221	ENST00000589867	ANKS1A	Q92625	1134 aa		20.42	■□□□□ 0.86
MBD1-221	ENST00000589867	RIPK3	Q9Y572	518 aa		20.42	■□□□□ 0.86
MBD1-221	ENST00000589867	TMEM232	C9JQI7	657 aa		20.41	■□□□□ 0.86
MBD1-221	ENST00000589867	PLA2G6	O60733	806 aa		20.41	■□□□□ 0.86
MBD1-221	ENST00000589867	COBL	O75128	1261 aa		20.41	■□□□□ 0.86
MBD1-221	ENST00000589867	HOXC6	P09630	235 aa		20.41	■□□□□ 0.86
MBD1-221	ENST00000589867	STAT3	P40763	770 aa		20.41	■□□□□ 0.86
MBD1-221	ENST00000589867	COL9A3	Q14050	684 aa	Predicted RBP	20.41	■□□□□ 0.86
MBD1-221	ENST00000589867	MAP3K21	Q5TCX8	1036 aa		20.41	■□□□□ 0.86
MBD1-221	ENST00000589867	WDR78	Q5VTH9	848 aa		20.41	■□□□□ 0.86
MBD1-221	ENST00000589867	TTBK2	Q6IQ55	1244 aa		20.41	■□□□□ 0.86
MBD1-221	ENST00000589867	CYB5R4	Q7L1T6	521 aa		20.41	■□□□□ 0.86

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