RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 ARHGEF6Q15052 776 aa12.37□□□□□ -0.43
SDF2-208ENST00000589788 PKN2Q16513 984 aaKnown RBP12.37□□□□□ -0.43
SDF2-208ENST00000589788 SBK1Q52WX2 424 aa12.37□□□□□ -0.43
SDF2-208ENST00000589788 IFFO2Q5TF58 517 aa12.37□□□□□ -0.43
SDF2-208ENST00000589788 CD99L2Q8TCZ2 262 aa12.37□□□□□ -0.43
SDF2-208ENST00000589788 SMCR8Q8TEV9 937 aaPredicted RBP12.37□□□□□ -0.43
SDF2-208ENST00000589788 SPIRE2Q8WWL2 714 aa12.37□□□□□ -0.43
SDF2-208ENST00000589788 HELLSQ9NRZ9 838 aa12.37□□□□□ -0.43
SDF2-208ENST00000589788 POLR3EQ9NVU0 708 aa12.37□□□□□ -0.43
SDF2-208ENST00000589788 LOC285556D6RIA3 1793 aa12.37□□□□□ -0.43
SDF2-208ENST00000589788 CYP2C8P10632 490 aa12.37□□□□□ -0.43
SDF2-208ENST00000589788 CDK8P49336 464 aa12.37□□□□□ -0.43
SDF2-208ENST00000589788 CLK2P49760 499 aaKnown RBP12.37□□□□□ -0.43
SDF2-208ENST00000589788 TREML2Q5T2D2 321 aa12.37□□□□□ -0.43
SDF2-208ENST00000589788 CCDC129Q6ZRS4 1044 aa12.37□□□□□ -0.43
SDF2-208ENST00000589788 TMEM179Q6ZVK1 233 aa12.37□□□□□ -0.43
SDF2-208ENST00000589788 C16orf86Q6ZW13 317 aa12.37□□□□□ -0.43
SDF2-208ENST00000589788 IFNL3Q8IZI9 196 aa12.37□□□□□ -0.43
SDF2-208ENST00000589788 ABHD8Q96I13 439 aa12.37□□□□□ -0.43
SDF2-208ENST00000589788 CCDC17Q96LX7 622 aa12.37□□□□□ -0.43
SDF2-208ENST00000589788 SLC4A5Q9BY07 1137 aa12.37□□□□□ -0.43
SDF2-208ENST00000589788 NAPBQ9H115 298 aa12.37□□□□□ -0.43
SDF2-208ENST00000589788 EPB41L4AQ9HCS5 686 aaPredicted RBP12.37□□□□□ -0.43
SDF2-208ENST00000589788 CPA4Q9UI42 421 aa12.37□□□□□ -0.43
SDF2-208ENST00000589788 TRIM17Q9Y577 477 aa12.37□□□□□ -0.43
SDF2-208ENST00000589788 DDX11L8A8MPP1 907 aa12.36□□□□□ -0.43
SDF2-208ENST00000589788 SMIM22K7EJ46 135 aa12.36□□□□□ -0.43
SDF2-208ENST00000589788 USP14P54578 494 aa12.36□□□□□ -0.43
SDF2-208ENST00000589788 SEPT2Q15019 361 aa12.36□□□□□ -0.43
SDF2-208ENST00000589788 ZYXQ15942 572 aaKnown RBP12.36□□□□□ -0.43
SDF2-208ENST00000589788 MCMDC2Q4G0Z9 681 aa12.36□□□□□ -0.43
SDF2-208ENST00000589788 USP17L2Q6R6M4 530 aa12.36□□□□□ -0.43
SDF2-208ENST00000589788 STK11IPQ8N1F8 1099 aa12.36□□□□□ -0.43
SDF2-208ENST00000589788 MARVELD3Q96A59 401 aa12.36□□□□□ -0.43
SDF2-208ENST00000589788 CCDC136Q96JN2 1154 aa12.36□□□□□ -0.43
SDF2-208ENST00000589788 FAM227BQ96M60 508 aa12.36□□□□□ -0.43
SDF2-208ENST00000589788 EFCC1Q9HA90 598 aa12.36□□□□□ -0.43
SDF2-208ENST00000589788 ZNF287Q9HBT7 754 aa12.36□□□□□ -0.43
SDF2-208ENST00000589788 ADGRA2Q96PE1 1338 aa12.35□□□□□ -0.43
SDF2-208ENST00000589788 A0A0D9SFI3 127 aa12.35□□□□□ -0.43
SDF2-208ENST00000589788 HIP1O00291 1037 aa12.35□□□□□ -0.43
SDF2-208ENST00000589788 SLC3A2P08195 630 aaKnown RBP12.35□□□□□ -0.43
SDF2-208ENST00000589788 AKR1B1P15121 316 aa12.35□□□□□ -0.43
SDF2-208ENST00000589788 SDSP20132 328 aa12.35□□□□□ -0.43
SDF2-208ENST00000589788 EMP3P54852 163 aa12.35□□□□□ -0.43
SDF2-208ENST00000589788 MFAP1P55081 439 aaKnown RBP12.35□□□□□ -0.43
SDF2-208ENST00000589788 IRX3P78415 501 aaPredicted RBP12.35□□□□□ -0.43
SDF2-208ENST00000589788 NMIQ13287 307 aaPredicted RBP12.35□□□□□ -0.43
SDF2-208ENST00000589788 C17orf99Q6UX52 265 aa12.35□□□□□ -0.43
SDF2-208ENST00000589788 OTOP1Q7RTM1 612 aa12.35□□□□□ -0.43
SDF2-208ENST00000589788 ZMYND15Q9H091 742 aa12.35□□□□□ -0.43
SDF2-208ENST00000589788 KIAA1683Q9H0B3 1180 aa12.35□□□□□ -0.43
SDF2-208ENST00000589788 MKNK2Q9HBH9 465 aa12.35□□□□□ -0.43
SDF2-208ENST00000589788 DIAPH3Q9NSV4 1193 aa12.35□□□□□ -0.43
SDF2-208ENST00000589788 LIMD1Q9UGP4 676 aa12.35□□□□□ -0.43
SDF2-208ENST00000589788 RABGEF1Q9UJ41 708 aa12.35□□□□□ -0.43
SDF2-208ENST00000589788 ROBO3Q96MS0 1386 aa12.34□□□□□ -0.43
SDF2-208ENST00000589788 GUCY1A2P33402 732 aa12.34□□□□□ -0.43
SDF2-208ENST00000589788 LACTBP83111 547 aaPredicted RBP12.34□□□□□ -0.43
SDF2-208ENST00000589788 ICA1Q05084 483 aa12.34□□□□□ -0.43
SDF2-208ENST00000589788 TTC22Q5TAA0 569 aa12.34□□□□□ -0.43
SDF2-208ENST00000589788 FBXO46Q6PJ61 603 aaPredicted RBP12.34□□□□□ -0.43
SDF2-208ENST00000589788 ACER1Q8TDN7 264 aa12.34□□□□□ -0.43
SDF2-208ENST00000589788 ASCC2Q9H1I8 757 aaPredicted RBP12.34□□□□□ -0.43
SDF2-208ENST00000589788 ARHGEF10LQ9HCE6 1279 aa12.34□□□□□ -0.43
SDF2-208ENST00000589788 CCDC85CA6NKD9 419 aa12.33□□□□□ -0.44
SDF2-208ENST00000589788 GCLCP48506 637 aaPredicted RBP12.33□□□□□ -0.44
SDF2-208ENST00000589788 PDE4BQ07343 736 aa12.33□□□□□ -0.44
SDF2-208ENST00000589788 PPARAQ07869 468 aa12.33□□□□□ -0.44
SDF2-208ENST00000589788 CWC27Q6UX04 472 aaKnown RBP12.33□□□□□ -0.44
SDF2-208ENST00000589788 CENPQQ7L2Z9 268 aaPredicted RBP12.33□□□□□ -0.44
SDF2-208ENST00000589788 ZNF444Q8N0Y2 327 aaPredicted RBP12.33□□□□□ -0.44
SDF2-208ENST00000589788 ANKRD13CQ8N6S4 541 aa12.33□□□□□ -0.44
SDF2-208ENST00000589788 SH2D4AQ9H788 454 aa12.33□□□□□ -0.44
SDF2-208ENST00000589788 KANSL2Q9H9L4 492 aa12.33□□□□□ -0.44
SDF2-208ENST00000589788 CCDC171Q6TFL3 1326 aa12.32□□□□□ -0.44
SDF2-208ENST00000589788 FMNL1O95466 1100 aaPredicted RBP12.32□□□□□ -0.44
SDF2-208ENST00000589788 GNRH1P01148 92 aa12.32□□□□□ -0.44
SDF2-208ENST00000589788 BCRP11274 1271 aa12.32□□□□□ -0.44
SDF2-208ENST00000589788 RASA1P20936 1047 aa12.32□□□□□ -0.44
SDF2-208ENST00000589788 HOXA7P31268 230 aaPredicted RBP12.32□□□□□ -0.44
SDF2-208ENST00000589788 PBX2P40425 430 aa12.32□□□□□ -0.44
SDF2-208ENST00000589788 PSMC4P43686 418 aa12.32□□□□□ -0.44
SDF2-208ENST00000589788 FCGRTP55899 365 aa12.32□□□□□ -0.44
SDF2-208ENST00000589788 ATP2B2Q01814 1243 aa12.32□□□□□ -0.44
SDF2-208ENST00000589788 MCM6Q14566 821 aa12.32□□□□□ -0.44
SDF2-208ENST00000589788 VPS53Q5VIR6 699 aa12.32□□□□□ -0.44
SDF2-208ENST00000589788 C12orf42Q96LP6 360 aa12.32□□□□□ -0.44
SDF2-208ENST00000589788 ARHGAP39Q9C0H5 1083 aa12.32□□□□□ -0.44
SDF2-208ENST00000589788 SEPT9Q9UHD8 586 aaPredicted RBP12.32□□□□□ -0.44
SDF2-208ENST00000589788 ZSWIM8A7E2V4 1837 aa12.31□□□□□ -0.44
SDF2-208ENST00000589788 A0A1W2PRG0 241 aa12.31□□□□□ -0.44
SDF2-208ENST00000589788 POTEB3A0JP26 581 aa12.31□□□□□ -0.44
SDF2-208ENST00000589788 USP17L15C9J2P7 530 aa12.31□□□□□ -0.44
SDF2-208ENST00000589788 USP17L13C9JLJ4 530 aa12.31□□□□□ -0.44
SDF2-208ENST00000589788 USP17L11C9JVI0 530 aa12.31□□□□□ -0.44
SDF2-208ENST00000589788 USP17L18D6R9N7 530 aa12.31□□□□□ -0.44
SDF2-208ENST00000589788 USP17L22D6RA61 530 aa12.31□□□□□ -0.44
SDF2-208ENST00000589788 USP17L17D6RBQ6 530 aa12.31□□□□□ -0.44
SDF2-208ENST00000589788 USP17L19D6RCP7 530 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms