RNA–Protein interactions for RNA: ENST00000588762.5

GHDC-209, Transcript of GH3 domain containing, humanhuman

TSL 1 (best)

Gene GHDC, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-209ENST00000588762 P2RX7Q99572 595 aaKnown RBP18.2■□□□□ 0.5
GHDC-209ENST00000588762 R3HDMLQ9H3Y0 253 aa18.2■□□□□ 0.5
GHDC-209ENST00000588762 HOXC10Q9NYD6 342 aa18.2■□□□□ 0.5
GHDC-209ENST00000588762 WDR19Q8NEZ3 1342 aa18.2■□□□□ 0.5
GHDC-209ENST00000588762 BMP3P12645 472 aa18.19■□□□□ 0.5
GHDC-209ENST00000588762 HERVK_113P62684 666 aa18.19■□□□□ 0.5
GHDC-209ENST00000588762 SAMD1Q6SPF0 538 aaPredicted RBP18.19■□□□□ 0.5
GHDC-209ENST00000588762 TMTC2Q8N394 836 aa18.19■□□□□ 0.5
GHDC-209ENST00000588762 IGDCC4Q8TDY8 1250 aa18.19■□□□□ 0.5
GHDC-209ENST00000588762 GTF3C2Q8WUA4 911 aaPredicted RBP18.19■□□□□ 0.5
GHDC-209ENST00000588762 CHMP4CQ96CF2 233 aa18.19■□□□□ 0.5
GHDC-209ENST00000588762 UPF2Q9HAU5 1272 aaKnown RBP18.19■□□□□ 0.5
GHDC-209ENST00000588762 CPA4Q9UI42 421 aa18.19■□□□□ 0.5
GHDC-209ENST00000588762 CASP8AP2Q9UKL3 1982 aa18.19■□□□□ 0.5
GHDC-209ENST00000588762 GPR25O00155 361 aa18.18■□□□□ 0.5
GHDC-209ENST00000588762 HSPA8P11142 646 aaKnown RBP18.18■□□□□ 0.5
GHDC-209ENST00000588762 CASTP20810 708 aaKnown RBP18.18■□□□□ 0.5
GHDC-209ENST00000588762 ANAPC15P60006 121 aa18.18■□□□□ 0.5
GHDC-209ENST00000588762 IKQ13123 557 aaPredicted RBP18.18■□□□□ 0.5
GHDC-209ENST00000588762 CCDC96Q2M329 555 aa18.18■□□□□ 0.5
GHDC-209ENST00000588762 NOM1Q5C9Z4 860 aaKnown RBP18.18■□□□□ 0.5
GHDC-209ENST00000588762 FEM1BQ9UK73 627 aa18.18■□□□□ 0.5
GHDC-209ENST00000588762 COL11A1P12107 1806 aaPredicted RBP18.18■□□□□ 0.5
GHDC-209ENST00000588762 MYPNQ86TC9 1320 aa18.18■□□□□ 0.5
GHDC-209ENST00000588762 ADGRA2Q96PE1 1338 aa18.18■□□□□ 0.5
GHDC-209ENST00000588762 LBX1P52954 281 aa18.17■□□□□ 0.5
GHDC-209ENST00000588762 FGD1P98174 961 aa18.17■□□□□ 0.5
GHDC-209ENST00000588762 EXOSC10Q01780 885 aaKnown RBP18.17■□□□□ 0.5
GHDC-209ENST00000588762 C17orf99Q6UX52 265 aa18.17■□□□□ 0.5
GHDC-209ENST00000588762 NFXL1Q6ZNB6 911 aa18.17■□□□□ 0.5
GHDC-209ENST00000588762 CHURC1Q8WUH1 139 aa18.17■□□□□ 0.5
GHDC-209ENST00000588762 TM6SF1Q9BZW5 370 aa18.17■□□□□ 0.5
GHDC-209ENST00000588762 LY9Q9HBG7 655 aa18.17■□□□□ 0.5
GHDC-209ENST00000588762 MGAMO43451 1857 aa18.16■□□□□ 0.5
GHDC-209ENST00000588762 CCDC69A6NI79 296 aa18.16■□□□□ 0.5
GHDC-209ENST00000588762 TMEM232C9JQI7 657 aa18.16■□□□□ 0.5
GHDC-209ENST00000588762 SH2B2O14492 632 aaPredicted RBP18.16■□□□□ 0.5
GHDC-209ENST00000588762 FKTNO75072 461 aa18.16■□□□□ 0.5
GHDC-209ENST00000588762 PDHBP11177 359 aa18.16■□□□□ 0.5
GHDC-209ENST00000588762 DSG3P32926 999 aa18.16■□□□□ 0.5
GHDC-209ENST00000588762 LIFRP42702 1097 aa18.16■□□□□ 0.5
GHDC-209ENST00000588762 STAT2P52630 851 aa18.16■□□□□ 0.5
GHDC-209ENST00000588762 SP3Q02447 781 aa18.16■□□□□ 0.5
GHDC-209ENST00000588762 COL9A3Q14050 684 aaPredicted RBP18.16■□□□□ 0.5
GHDC-209ENST00000588762 LBX2Q6XYB7 198 aa18.16■□□□□ 0.5
GHDC-209ENST00000588762 KCTD1Q719H9 257 aa18.16■□□□□ 0.5
GHDC-209ENST00000588762 CATIPQ7Z7H3 387 aa18.16■□□□□ 0.5
GHDC-209ENST00000588762 FAM160B2Q86V87 743 aa18.16■□□□□ 0.5
GHDC-209ENST00000588762 ANKRD13CQ8N6S4 541 aa18.16■□□□□ 0.5
GHDC-209ENST00000588762 PRPF38AQ8NAV1 312 aaKnown RBP18.16■□□□□ 0.5
GHDC-209ENST00000588762 SLF1Q9BQI6 1058 aa18.16■□□□□ 0.5
GHDC-209ENST00000588762 LRRC2Q9BYS8 371 aa18.16■□□□□ 0.5
GHDC-209ENST00000588762 FBXO28Q9NVF7 368 aa18.16■□□□□ 0.5
GHDC-209ENST00000588762 PPP1R9AQ9ULJ8 1098 aa18.16■□□□□ 0.5
GHDC-209ENST00000588762 CYP46A1Q9Y6A2 500 aa18.16■□□□□ 0.5
GHDC-209ENST00000588762 A0A0G2JMZ2 1700 aa18.15■□□□□ 0.5
GHDC-209ENST00000588762 SPDYE16A6NNV3 312 aaPredicted RBP18.15■□□□□ 0.5
GHDC-209ENST00000588762 BCRP11274 1271 aa18.15■□□□□ 0.5
GHDC-209ENST00000588762 CPA1P15085 419 aa18.15■□□□□ 0.5
GHDC-209ENST00000588762 RPS6KB1P23443 525 aa18.15■□□□□ 0.5
GHDC-209ENST00000588762 GPATCH4Q5T3I0 446 aaKnown RBP18.15■□□□□ 0.5
GHDC-209ENST00000588762 RUFY3Q7L099 469 aa18.15■□□□□ 0.5
GHDC-209ENST00000588762 MB21D1Q8N884 522 aa18.15■□□□□ 0.5
GHDC-209ENST00000588762 ZNF296Q8WUU4 475 aaPredicted RBP18.15■□□□□ 0.5
GHDC-209ENST00000588762 KIFC2Q96AC6 838 aa18.15■□□□□ 0.5
GHDC-209ENST00000588762 TCEANC2Q96MN5 208 aa18.15■□□□□ 0.5
GHDC-209ENST00000588762 PAGR1Q9BTK6 254 aa18.15■□□□□ 0.5
GHDC-209ENST00000588762 ZSWIM6Q9HCJ5 1215 aa18.15■□□□□ 0.5
GHDC-209ENST00000588762 GPCPD1Q9NPB8 672 aa18.15■□□□□ 0.5
GHDC-209ENST00000588762 GPHNQ9NQX3 736 aaPredicted RBP18.15■□□□□ 0.5
GHDC-209ENST00000588762 RABGAP1Q9Y3P9 1069 aa18.15■□□□□ 0.5
GHDC-209ENST00000588762 CTDP1Q9Y5B0 961 aaPredicted RBP18.15■□□□□ 0.5
GHDC-209ENST00000588762 PLA2G6O60733 806 aa18.14■□□□□ 0.49
GHDC-209ENST00000588762 SNHG28P0DPA3 235 aa18.14■□□□□ 0.49
GHDC-209ENST00000588762 ZNF543Q08ER8 600 aa18.14■□□□□ 0.49
GHDC-209ENST00000588762 KIF22Q14807 665 aa18.14■□□□□ 0.49
GHDC-209ENST00000588762 FAM110CQ1W6H9 321 aa18.14■□□□□ 0.49
GHDC-209ENST00000588762 ASPRV1Q53RT3 343 aa18.14■□□□□ 0.49
GHDC-209ENST00000588762 SYNE3Q6ZMZ3 975 aa18.14■□□□□ 0.49
GHDC-209ENST00000588762 GPRC5AQ8NFJ5 357 aa18.14■□□□□ 0.49
GHDC-209ENST00000588762 ATG4CQ96DT6 458 aa18.14■□□□□ 0.49
GHDC-209ENST00000588762 SENP2Q9HC62 589 aa18.14■□□□□ 0.49
GHDC-209ENST00000588762 MORF4L1Q9UBU8 362 aa18.14■□□□□ 0.49
GHDC-209ENST00000588762 FRMPD2Q68DX3 1309 aaPredicted RBP18.14■□□□□ 0.49
GHDC-209ENST00000588762 MYH6P13533 1939 aa18.13■□□□□ 0.49
GHDC-209ENST00000588762 PARP1P09874 1014 aaKnown RBP18.13■□□□□ 0.49
GHDC-209ENST00000588762 RASGRP2Q7LDG7 609 aa18.13■□□□□ 0.49
GHDC-209ENST00000588762 ZNF654Q8IZM8 581 aa18.13■□□□□ 0.49
GHDC-209ENST00000588762 ERO1AQ96HE7 468 aa18.13■□□□□ 0.49
GHDC-209ENST00000588762 C22orf23Q9BZE7 217 aa18.13■□□□□ 0.49
GHDC-209ENST00000588762 RBPJLQ9UBG7 517 aa18.13■□□□□ 0.49
GHDC-209ENST00000588762 SLC12A7Q9Y666 1083 aa18.13■□□□□ 0.49
GHDC-209ENST00000588762 VWA5AO00534 786 aa18.12■□□□□ 0.49
GHDC-209ENST00000588762 ZBED4O75132 1171 aa18.12■□□□□ 0.49
GHDC-209ENST00000588762 DDAH1O94760 285 aa18.12■□□□□ 0.49
GHDC-209ENST00000588762 CALM1P0DP23 149 aa18.12■□□□□ 0.49
GHDC-209ENST00000588762 CALM2P0DP24 149 aa18.12■□□□□ 0.49
GHDC-209ENST00000588762 CALM3P0DP25 149 aa18.12■□□□□ 0.49
GHDC-209ENST00000588762 FDX1P10109 184 aa18.12■□□□□ 0.49
GHDC-209ENST00000588762 ERVK-9P63128 1117 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms