RNA–Protein interactions for RNA: ENST00000578441.5

CTC1-204, Transcript of CST telomere replication complex component 1, humanhuman

TSL 5

Gene CTC1, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-204ENST00000578441 NCAPG2Q86XI2 1143 aa12.14□□□□□ -0.47
CTC1-204ENST00000578441 SIAH1Q8IUQ4 282 aa12.14□□□□□ -0.47
CTC1-204ENST00000578441 MIER1Q8N108 512 aa12.14□□□□□ -0.47
CTC1-204ENST00000578441 SLC44A5Q8NCS7 719 aa12.14□□□□□ -0.47
CTC1-204ENST00000578441 ATG4CQ96DT6 458 aa12.14□□□□□ -0.47
CTC1-204ENST00000578441 DYNLL2Q96FJ2 89 aa12.14□□□□□ -0.47
CTC1-204ENST00000578441 MAML3Q96JK9 1138 aa12.14□□□□□ -0.47
CTC1-204ENST00000578441 BOLA2Q9H3K6 86 aa12.14□□□□□ -0.47
CTC1-204ENST00000578441 ARPP21Q9UBL0 812 aaPredicted RBP12.14□□□□□ -0.47
CTC1-204ENST00000578441 SPTBN5Q9NRC6 3674 aaKnown RBP12.14□□□□□ -0.47
CTC1-204ENST00000578441 ZNFX1Q9P2E3 1918 aaKnown RBP12.13□□□□□ -0.47
CTC1-204ENST00000578441 PLXNA1Q9UIW2 1896 aa12.13□□□□□ -0.47
CTC1-204ENST00000578441 COBLO75128 1261 aa12.13□□□□□ -0.47
CTC1-204ENST00000578441 CYP2D6P10635 497 aa12.13□□□□□ -0.47
CTC1-204ENST00000578441 RTP1P59025 263 aa12.13□□□□□ -0.47
CTC1-204ENST00000578441 MDM2Q00987 491 aaPredicted RBP12.13□□□□□ -0.47
CTC1-204ENST00000578441 EVX2Q03828 476 aa12.13□□□□□ -0.47
CTC1-204ENST00000578441 KIAA1755Q5JYT7 1200 aa12.13□□□□□ -0.47
CTC1-204ENST00000578441 SLC39A5Q6ZMH5 540 aa12.13□□□□□ -0.47
CTC1-204ENST00000578441 RIOX2Q8IUF8 465 aa12.13□□□□□ -0.47
CTC1-204ENST00000578441 SPICE1Q8N0Z3 855 aa12.13□□□□□ -0.47
CTC1-204ENST00000578441 MSL3Q8N5Y2 521 aaKnown RBP12.13□□□□□ -0.47
CTC1-204ENST00000578441 LRRCC1Q9C099 1032 aa12.13□□□□□ -0.47
CTC1-204ENST00000578441 SYNPO2Q9UMS6 1093 aa12.13□□□□□ -0.47
CTC1-204ENST00000578441 COG6Q9Y2V7 657 aa12.13□□□□□ -0.47
CTC1-204ENST00000578441 PRKAB2O43741 272 aa12.12□□□□□ -0.47
CTC1-204ENST00000578441 EEF2P13639 858 aaKnown RBP12.12□□□□□ -0.47
CTC1-204ENST00000578441 KCTD2Q14681 263 aa12.12□□□□□ -0.47
CTC1-204ENST00000578441 TMEM132BQ14DG7 1078 aa12.12□□□□□ -0.47
CTC1-204ENST00000578441 SBK1Q52WX2 424 aa12.12□□□□□ -0.47
CTC1-204ENST00000578441 GJC2Q5T442 439 aaPredicted RBP12.12□□□□□ -0.47
CTC1-204ENST00000578441 CTR9Q6PD62 1173 aa12.12□□□□□ -0.47
CTC1-204ENST00000578441 PPP1R9AQ9ULJ8 1098 aa12.12□□□□□ -0.47
CTC1-204ENST00000578441 SLC4A4Q9Y6R1 1079 aa12.12□□□□□ -0.47
CTC1-204ENST00000578441 LAMA2P24043 3122 aaKnown RBP12.12□□□□□ -0.47
CTC1-204ENST00000578441 VWA5AO00534 786 aa12.11□□□□□ -0.47
CTC1-204ENST00000578441 RARBP10826 455 aa12.11□□□□□ -0.47
CTC1-204ENST00000578441 STAT3P40763 770 aa12.11□□□□□ -0.47
CTC1-204ENST00000578441 ATN1P54259 1190 aaPredicted RBP12.11□□□□□ -0.47
CTC1-204ENST00000578441 LRRC41Q15345 812 aa12.11□□□□□ -0.47
CTC1-204ENST00000578441 DIEXFQ68CQ4 756 aaKnown RBP12.11□□□□□ -0.47
CTC1-204ENST00000578441 MAFAQ8NHW3 353 aaPredicted RBP12.11□□□□□ -0.47
CTC1-204ENST00000578441 GPATCH3Q96I76 525 aa12.11□□□□□ -0.47
CTC1-204ENST00000578441 MMP19Q99542 508 aa12.11□□□□□ -0.47
CTC1-204ENST00000578441 CDX2Q99626 313 aaPredicted RBP12.11□□□□□ -0.47
CTC1-204ENST00000578441 TINF2Q9BSI4 451 aa12.11□□□□□ -0.47
CTC1-204ENST00000578441 ZNF287Q9HBT7 754 aa12.11□□□□□ -0.47
CTC1-204ENST00000578441 ZNF214Q9UL59 606 aaPredicted RBP12.11□□□□□ -0.47
CTC1-204ENST00000578441 PHF24Q9UPV7 400 aa12.11□□□□□ -0.47
CTC1-204ENST00000578441 ATP11BQ9Y2G3 1177 aa12.11□□□□□ -0.47
CTC1-204ENST00000578441 TMEM265A0A087WTH1 108 aa12.1□□□□□ -0.47
CTC1-204ENST00000578441 ATP2A1O14983 1001 aa12.1□□□□□ -0.47
CTC1-204ENST00000578441 ZFYP08048 801 aaPredicted RBP12.1□□□□□ -0.47
CTC1-204ENST00000578441 GNAT2P19087 354 aa12.1□□□□□ -0.47
CTC1-204ENST00000578441 ZNF792Q3KQV3 632 aa12.1□□□□□ -0.47
CTC1-204ENST00000578441 RNF180Q86T96 592 aa12.1□□□□□ -0.47
CTC1-204ENST00000578441 CLEC10AQ8IUN9 316 aa12.1□□□□□ -0.47
CTC1-204ENST00000578441 REPS2Q8NFH8 660 aa12.1□□□□□ -0.47
CTC1-204ENST00000578441 TEX13BQ9BXU2 312 aa12.1□□□□□ -0.47
CTC1-204ENST00000578441 PUS7LQ9H0K6 701 aaKnown RBP12.1□□□□□ -0.47
CTC1-204ENST00000578441 SEMA6BQ9H3T3 888 aa12.1□□□□□ -0.47
CTC1-204ENST00000578441 XPNPEP3Q9NQH7 507 aa12.1□□□□□ -0.47
CTC1-204ENST00000578441 ECHDC1Q9NTX5 307 aa12.1□□□□□ -0.47
CTC1-204ENST00000578441 NYAP2Q9P242 653 aa12.1□□□□□ -0.47
CTC1-204ENST00000578441 RCAN3Q9UKA8 241 aa12.1□□□□□ -0.47
CTC1-204ENST00000578441 CNPY2Q9Y2B0 182 aa12.1□□□□□ -0.47
CTC1-204ENST00000578441 SYNGAP1Q96PV0 1343 aa12.1□□□□□ -0.47
CTC1-204ENST00000578441 CYP2D7A0A087X1C5 515 aa12.09□□□□□ -0.47
CTC1-204ENST00000578441 AKR1A1P14550 325 aa12.09□□□□□ -0.47
CTC1-204ENST00000578441 ADCYAP1R1P41586 468 aa12.09□□□□□ -0.47
CTC1-204ENST00000578441 SMAD3P84022 425 aaKnown RBP12.09□□□□□ -0.47
CTC1-204ENST00000578441 LRRFIP1Q32MZ4 808 aaKnown RBP12.09□□□□□ -0.47
CTC1-204ENST00000578441 FAM47AQ5JRC9 791 aa12.09□□□□□ -0.47
CTC1-204ENST00000578441 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.09□□□□□ -0.47
CTC1-204ENST00000578441 KBTBD3Q8NAB2 608 aa12.09□□□□□ -0.47
CTC1-204ENST00000578441 PRPF38AQ8NAV1 312 aaKnown RBP12.09□□□□□ -0.47
CTC1-204ENST00000578441 STRBPQ96SI9 672 aaKnown RBP12.09□□□□□ -0.47
CTC1-204ENST00000578441 SLF1Q9BQI6 1058 aa12.09□□□□□ -0.47
CTC1-204ENST00000578441 TSEN34Q9BSV6 310 aaKnown RBP12.09□□□□□ -0.47
CTC1-204ENST00000578441 PDLIM7Q9NR12 457 aa12.09□□□□□ -0.47
CTC1-204ENST00000578441 FBXO28Q9NVF7 368 aa12.09□□□□□ -0.47
CTC1-204ENST00000578441 TACC3Q9Y6A5 838 aa12.09□□□□□ -0.47
CTC1-204ENST00000578441 PRUNE2Q8WUY3 3088 aa12.09□□□□□ -0.47
CTC1-204ENST00000578441 MUC3AQ02505 3323 aa12.08□□□□□ -0.48
CTC1-204ENST00000578441 TRIM60Q495X7 471 aa12.08□□□□□ -0.48
CTC1-204ENST00000578441 FAM83BQ5T0W9 1011 aa12.08□□□□□ -0.48
CTC1-204ENST00000578441 MAMDC4Q6UXC1 1216 aa12.08□□□□□ -0.48
CTC1-204ENST00000578441 ZNF467Q7Z7K2 595 aaPredicted RBP12.08□□□□□ -0.48
CTC1-204ENST00000578441 APPBP2Q92624 585 aa12.08□□□□□ -0.48
CTC1-204ENST00000578441 TOX2Q96NM4 488 aa12.08□□□□□ -0.48
CTC1-204ENST00000578441 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.08□□□□□ -0.48
CTC1-204ENST00000578441 MKNK2Q9HBH9 465 aa12.08□□□□□ -0.48
CTC1-204ENST00000578441 MYH4Q9Y623 1939 aa12.07□□□□□ -0.48
CTC1-204ENST00000578441 NCOR1O75376 2440 aa12.07□□□□□ -0.48
CTC1-204ENST00000578441 EYSQ5T1H1 3165 aa12.07□□□□□ -0.48
CTC1-204ENST00000578441 MOXD2PA6NHM9 499 aa12.07□□□□□ -0.48
CTC1-204ENST00000578441 GSG1L2A8MUP6 293 aa12.07□□□□□ -0.48
CTC1-204ENST00000578441 F5H6K3 240 aa12.07□□□□□ -0.48
CTC1-204ENST00000578441 PGK2P07205 417 aa12.07□□□□□ -0.48
CTC1-204ENST00000578441 CLTBP09497 229 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms